RNA–Protein interactions for RNA: ENST00000343805.10

SP140-201, Transcript of SP140 nuclear body protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SP140, Length 2,910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-201ENST00000343805 NECTIN2Q92692 538 aa12.14□□□□□ -0.47
SP140-201ENST00000343805 CIZ1Q9ULV3 898 aaPredicted RBP12.14□□□□□ -0.47
SP140-201ENST00000343805 RBM19Q9Y4C8 960 aaKnown RBP12.13□□□□□ -0.47
SP140-201ENST00000343805 MSH5O43196 834 aa12.13□□□□□ -0.47
SP140-201ENST00000343805 GLIPR1L2Q4G1C9 344 aa12.13□□□□□ -0.47
SP140-201ENST00000343805 PHLDB1Q86UU1 1377 aa12.13□□□□□ -0.47
SP140-201ENST00000343805 RAD54L2Q9Y4B4 1467 aa12.12□□□□□ -0.47
SP140-201ENST00000343805 FHOD3Q2V2M9 1422 aa12.11□□□□□ -0.47
SP140-201ENST00000343805 FANCIQ9NVI1 1328 aa12.11□□□□□ -0.47
SP140-201ENST00000343805 DCAF8L1A6NGE4 600 aa12.11□□□□□ -0.47
SP140-201ENST00000343805 SLC24A3Q9HC58 644 aa12.1□□□□□ -0.47
SP140-201ENST00000343805 AAMPQ13685 434 aa12.08□□□□□ -0.48
SP140-201ENST00000343805 TAF7LQ5H9L4 462 aa12.07□□□□□ -0.48
SP140-201ENST00000343805 ZMYND15Q9H091 742 aa12.07□□□□□ -0.48
SP140-201ENST00000343805 GTPBP6O43824 516 aaPredicted RBP12.07□□□□□ -0.48
SP140-201ENST00000343805 SETD5Q9C0A6 1442 aa12.07□□□□□ -0.48
SP140-201ENST00000343805 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.07□□□□□ -0.48
SP140-201ENST00000343805 FANCD2Q9BXW9 1451 aa12.06□□□□□ -0.48
SP140-201ENST00000343805 LRRC9Q6ZRR7 1453 aa12.06□□□□□ -0.48
SP140-201ENST00000343805 TIAM1Q13009 1591 aa12.05□□□□□ -0.48
SP140-201ENST00000343805 TDRD9Q8NDG6 1382 aaKnown RBP12.04□□□□□ -0.48
SP140-201ENST00000343805 KCNV2Q8TDN2 545 aa12.04□□□□□ -0.48
SP140-201ENST00000343805 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.03□□□□□ -0.48
SP140-201ENST00000343805 GPBP1L1Q9HC44 474 aaPredicted RBP12.03□□□□□ -0.48
SP140-201ENST00000343805 BCL11BQ9C0K0 894 aaPredicted RBP12.03□□□□□ -0.48
SP140-201ENST00000343805 ZNF428Q96B54 188 aa12.02□□□□□ -0.48
SP140-201ENST00000343805 FHAD1B1AJZ9 1412 aa12.02□□□□□ -0.49
SP140-201ENST00000343805 CHIC2Q9UKJ5 165 aa12.01□□□□□ -0.49
SP140-201ENST00000343805 MAPKBP1O60336 1514 aa12.01□□□□□ -0.49
SP140-201ENST00000343805 TRIM52Q96A61 297 aa12□□□□□ -0.49
SP140-201ENST00000343805 MTUS2Q5JR59 1369 aa11.99□□□□□ -0.49
SP140-201ENST00000343805 PCF11O94913 1555 aaKnown RBP11.99□□□□□ -0.49
SP140-201ENST00000343805 WDR97A6NE52 1622 aa11.98□□□□□ -0.49
SP140-201ENST00000343805 POLA1P09884 1462 aaPredicted RBP11.98□□□□□ -0.49
SP140-201ENST00000343805 IGSF3O75054 1194 aa11.98□□□□□ -0.49
SP140-201ENST00000343805 RBM10P98175 930 aaKnown RBP11.98□□□□□ -0.49
SP140-201ENST00000343805 RSPH6AQ9H0K4 717 aa11.98□□□□□ -0.49
SP140-201ENST00000343805 RRP7BPQ9NSQ0 103 aa11.97□□□□□ -0.49
SP140-201ENST00000343805 KIF21AQ7Z4S6 1674 aa11.95□□□□□ -0.5
SP140-201ENST00000343805 TOPBP1Q92547 1522 aa11.95□□□□□ -0.5
SP140-201ENST00000343805 PPP1R15AO75807 674 aaPredicted RBP11.95□□□□□ -0.5
SP140-201ENST00000343805 IL27Q8NEV9 243 aa11.95□□□□□ -0.5
SP140-201ENST00000343805 HS6ST3Q8IZP7 471 aa11.94□□□□□ -0.5
SP140-201ENST00000343805 PLCD3Q8N3E9 789 aa11.94□□□□□ -0.5
SP140-201ENST00000343805 TONSLQ96HA7 1378 aa11.94□□□□□ -0.5
SP140-201ENST00000343805 CADPS2Q86UW7 1296 aa11.93□□□□□ -0.5
SP140-201ENST00000343805 SAMD1Q6SPF0 538 aaPredicted RBP11.92□□□□□ -0.5
SP140-201ENST00000343805 ZC3H15Q8WU90 426 aaKnown RBP11.92□□□□□ -0.5
SP140-201ENST00000343805 PRDM2Q13029 1718 aa11.92□□□□□ -0.5
SP140-201ENST00000343805 ANP32CO43423 234 aa11.92□□□□□ -0.5
SP140-201ENST00000343805 A0A0U1RQG5 324 aaPredicted RBP11.9□□□□□ -0.5
SP140-201ENST00000343805 LAMC3Q9Y6N6 1575 aa11.9□□□□□ -0.5
SP140-201ENST00000343805 C11orf95C9JLR9 678 aaPredicted RBP11.9□□□□□ -0.5
SP140-201ENST00000343805 CNGB1Q14028 1251 aaPredicted RBP11.9□□□□□ -0.5
SP140-201ENST00000343805 ERCC6Q03468 1493 aa11.9□□□□□ -0.5
SP140-201ENST00000343805 ABCA10Q8WWZ4 1543 aa11.9□□□□□ -0.51
SP140-201ENST00000343805 MAP3K1Q13233 1512 aa11.89□□□□□ -0.51
SP140-201ENST00000343805 CASKIN1Q8WXD9 1431 aa11.89□□□□□ -0.51
SP140-201ENST00000343805 DNMBPQ6XZF7 1577 aa11.89□□□□□ -0.51
SP140-201ENST00000343805 PTPRKQ15262 1439 aa11.89□□□□□ -0.51
SP140-201ENST00000343805 FGD6Q6ZV73 1430 aa11.89□□□□□ -0.51
SP140-201ENST00000343805 FMN1Q68DA7 1419 aa11.87□□□□□ -0.51
SP140-201ENST00000343805 FYCO1Q9BQS8 1478 aa11.87□□□□□ -0.51
SP140-201ENST00000343805 APBB1O00213 710 aa11.87□□□□□ -0.51
SP140-201ENST00000343805 URB2Q14146 1524 aaKnown RBP11.86□□□□□ -0.51
SP140-201ENST00000343805 CCDC18Q5T9S5 1454 aa11.86□□□□□ -0.51
SP140-201ENST00000343805 RSPH4AQ5TD94 716 aa11.86□□□□□ -0.51
SP140-201ENST00000343805 PDS5BQ9NTI5 1447 aa11.86□□□□□ -0.51
SP140-201ENST00000343805 GAPVD1Q14C86 1478 aa11.85□□□□□ -0.51
SP140-201ENST00000343805 CFAP43Q8NDM7 1665 aa11.84□□□□□ -0.51
SP140-201ENST00000343805 NCOA2Q15596 1464 aa11.83□□□□□ -0.52
SP140-201ENST00000343805 IRX6P78412 446 aaPredicted RBP11.83□□□□□ -0.52
SP140-201ENST00000343805 SEMA3EO15041 775 aa11.82□□□□□ -0.52
SP140-201ENST00000343805 ZNF326Q5BKZ1 582 aaKnown RBP11.82□□□□□ -0.52
SP140-201ENST00000343805 MKRN3Q13064 507 aaKnown RBP11.81□□□□□ -0.52
SP140-201ENST00000343805 AQRO60306 1485 aaKnown RBP eCLIP11.81□□□□□ -0.52
SP140-201ENST00000343805 EFCAB5A4FU69 1503 aa11.81□□□□□ -0.52
SP140-201ENST00000343805 BRD2P25440 801 aaKnown RBP11.8□□□□□ -0.52
SP140-201ENST00000343805 HNRNPUQ00839 825 aaKnown RBP eCLIP11.8□□□□□ -0.52
SP140-201ENST00000343805 SNAPC4Q5SXM2 1469 aa11.8□□□□□ -0.52
SP140-201ENST00000343805 STK25O00506 426 aa11.8□□□□□ -0.52
SP140-201ENST00000343805 POLA2Q14181 598 aa11.79□□□□□ -0.52
SP140-201ENST00000343805 POLR3GLQ9BT43 218 aa11.79□□□□□ -0.52
SP140-201ENST00000343805 NAIPQ13075 1403 aa11.79□□□□□ -0.52
SP140-201ENST00000343805 MYOM3Q5VTT5 1437 aa11.79□□□□□ -0.52
SP140-201ENST00000343805 HSPA5P11021 654 aaKnown RBP11.78□□□□□ -0.52
SP140-201ENST00000343805 CTTNBP2Q8WZ74 1663 aa11.78□□□□□ -0.52
SP140-201ENST00000343805 UACAQ9BZF9 1416 aa11.78□□□□□ -0.52
SP140-201ENST00000343805 HFM1A2PYH4 1435 aa11.77□□□□□ -0.53
SP140-201ENST00000343805 ZNF644Q9H582 1327 aaPredicted RBP11.77□□□□□ -0.53
SP140-201ENST00000343805 SENP3-EIF4A1A0A087X0R7 540 aa11.77□□□□□ -0.53
SP140-201ENST00000343805 CUL7Q14999 1698 aa11.77□□□□□ -0.53
SP140-201ENST00000343805 ZNF777Q9ULD5 760 aaPredicted RBP11.76□□□□□ -0.53
SP140-201ENST00000343805 L3MBTL2Q969R5 705 aa11.76□□□□□ -0.53
SP140-201ENST00000343805 MPHOSPH9Q99550 1183 aa11.76□□□□□ -0.53
SP140-201ENST00000343805 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.75□□□□□ -0.53
SP140-201ENST00000343805 CCER2I3L3R5 266 aa11.75□□□□□ -0.53
SP140-201ENST00000343805 SPINK5Q9NQ38 1064 aaPredicted RBP11.74□□□□□ -0.53
SP140-201ENST00000343805 FAM9BQ8IZU0 186 aa11.74□□□□□ -0.53
SP140-201ENST00000343805 PTPN23Q9H3S7 1636 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms