RNA–Protein interactions for RNA: ENST00000341567.8

TMEM248-201, Transcript of transmembrane protein 248, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM248, Length 4,229 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-201ENST00000341567 NUTM2DQ5VT03 806 aaPredicted RBP17.91■□□□□ 0.46
TMEM248-201ENST00000341567 TIMELESSQ9UNS1 1208 aa17.91■□□□□ 0.46
TMEM248-201ENST00000341567 BIVM-ERCC5R4GMW8 1640 aa17.91■□□□□ 0.46
TMEM248-201ENST00000341567 DEKP35659 375 aaKnown RBP17.9■□□□□ 0.46
TMEM248-201ENST00000341567 NOP58Q9Y2X3 529 aaKnown RBP17.88■□□□□ 0.45
TMEM248-201ENST00000341567 KIF3BO15066 747 aa17.87■□□□□ 0.45
TMEM248-201ENST00000341567 TOPBP1Q92547 1522 aa17.87■□□□□ 0.45
TMEM248-201ENST00000341567 DNMBPQ6XZF7 1577 aa17.86■□□□□ 0.45
TMEM248-201ENST00000341567 STK26Q9P289 416 aa17.85■□□□□ 0.45
TMEM248-201ENST00000341567 ZBTB7CA1YPR0 619 aa17.85■□□□□ 0.45
TMEM248-201ENST00000341567 CCER2I3L3R5 266 aa17.84■□□□□ 0.45
TMEM248-201ENST00000341567 EFCAB2Q5VUJ9 269 aa17.84■□□□□ 0.45
TMEM248-201ENST00000341567 PRXQ9BXM0 1461 aa17.82■□□□□ 0.44
TMEM248-201ENST00000341567 C14orf37Q86TY3 774 aa17.82■□□□□ 0.44
TMEM248-201ENST00000341567 ANKRD30AQ9BXX3 1397 aa17.81■□□□□ 0.44
TMEM248-201ENST00000341567 ST20-MTHFSA0A0A6YYL1 179 aa17.8■□□□□ 0.44
TMEM248-201ENST00000341567 SOX12O15370 315 aa17.79■□□□□ 0.44
TMEM248-201ENST00000341567 POGKQ9P215 609 aa17.79■□□□□ 0.44
TMEM248-201ENST00000341567 MRC2Q9UBG0 1479 aa17.79■□□□□ 0.44
TMEM248-201ENST00000341567 POLA1P09884 1462 aaPredicted RBP17.78■□□□□ 0.44
TMEM248-201ENST00000341567 URB2Q14146 1524 aaKnown RBP17.78■□□□□ 0.44
TMEM248-201ENST00000341567 TMF1P82094 1093 aa17.77■□□□□ 0.44
TMEM248-201ENST00000341567 LRRC9Q6ZRR7 1453 aa17.77■□□□□ 0.44
TMEM248-201ENST00000341567 PTPRGP23470 1445 aa17.77■□□□□ 0.44
TMEM248-201ENST00000341567 CCDC18Q5T9S5 1454 aa17.76■□□□□ 0.43
TMEM248-201ENST00000341567 ROCK2O75116 1388 aaKnown RBP17.76■□□□□ 0.43
TMEM248-201ENST00000341567 FGD6Q6ZV73 1430 aa17.75■□□□□ 0.43
TMEM248-201ENST00000341567 KIF21AQ7Z4S6 1674 aa17.74■□□□□ 0.43
TMEM248-201ENST00000341567 U2SURPO15042 1029 aaKnown RBP17.74■□□□□ 0.43
TMEM248-201ENST00000341567 SPAG9O60271 1321 aaKnown RBP17.73■□□□□ 0.43
TMEM248-201ENST00000341567 FRAT1Q92837 279 aaPredicted RBP17.73■□□□□ 0.43
TMEM248-201ENST00000341567 CYB5RLQ6IPT4 315 aa17.72■□□□□ 0.43
TMEM248-201ENST00000341567 TRHP20396 242 aaPredicted RBP17.71■□□□□ 0.43
TMEM248-201ENST00000341567 CDCA8Q53HL2 280 aa17.71■□□□□ 0.43
TMEM248-201ENST00000341567 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.71■□□□□ 0.43
TMEM248-201ENST00000341567 SRPK2P78362 688 aaKnown RBP17.71■□□□□ 0.42
TMEM248-201ENST00000341567 RGS3P49796 1198 aa17.7■□□□□ 0.42
TMEM248-201ENST00000341567 UPF2Q9HAU5 1272 aaKnown RBP17.69■□□□□ 0.42
TMEM248-201ENST00000341567 HSP90AA1P07900 732 aaKnown RBP17.68■□□□□ 0.42
TMEM248-201ENST00000341567 ABCA10Q8WWZ4 1543 aa17.67■□□□□ 0.42
TMEM248-201ENST00000341567 MYOM3Q5VTT5 1437 aa17.66■□□□□ 0.42
TMEM248-201ENST00000341567 NCOA2Q15596 1464 aa17.66■□□□□ 0.42
TMEM248-201ENST00000341567 TRAK1Q9UPV9 953 aa17.65■□□□□ 0.42
TMEM248-201ENST00000341567 KANK1Q14678 1352 aa17.65■□□□□ 0.42
TMEM248-201ENST00000341567 LMOD2Q6P5Q4 547 aa17.65■□□□□ 0.42
TMEM248-201ENST00000341567 AFAP1Q8N556 730 aa17.65■□□□□ 0.42
TMEM248-201ENST00000341567 NUTM2FA1L443 756 aa17.63■□□□□ 0.41
TMEM248-201ENST00000341567 CFAP53Q96M91 514 aa17.63■□□□□ 0.41
TMEM248-201ENST00000341567 PRKRIP1Q9H875 184 aaPredicted RBP17.63■□□□□ 0.41
TMEM248-201ENST00000341567 CASKIN1Q8WXD9 1431 aa17.63■□□□□ 0.41
TMEM248-201ENST00000341567 CCDC146Q8IYE0 955 aa17.62■□□□□ 0.41
TMEM248-201ENST00000341567 ERICH3Q5RHP9 1530 aa17.62■□□□□ 0.41
TMEM248-201ENST00000341567 MORC1Q86VD1 984 aa17.61■□□□□ 0.41
TMEM248-201ENST00000341567 WASHC2CQ9Y4E1 1318 aa17.61■□□□□ 0.41
TMEM248-201ENST00000341567 RRBP1Q9P2E9 1410 aaKnown RBP17.59■□□□□ 0.41
TMEM248-201ENST00000341567 DDRGK1Q96HY6 314 aa17.59■□□□□ 0.41
TMEM248-201ENST00000341567 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.59■□□□□ 0.41
TMEM248-201ENST00000341567 PANK3Q9H999 370 aa17.59■□□□□ 0.41
TMEM248-201ENST00000341567 PRG4Q92954 1404 aaPredicted RBP17.59■□□□□ 0.41
TMEM248-201ENST00000341567 IFT140Q96RY7 1462 aa17.58■□□□□ 0.41
TMEM248-201ENST00000341567 A0A0G2JS52 829 aa17.58■□□□□ 0.41
TMEM248-201ENST00000341567 NBPF8Q3BBV2 869 aa17.57■□□□□ 0.4
TMEM248-201ENST00000341567 KTN1Q86UP2 1357 aaKnown RBP17.56■□□□□ 0.4
TMEM248-201ENST00000341567 WASHC2AQ641Q2 1341 aa17.56■□□□□ 0.4
TMEM248-201ENST00000341567 USP47Q96K76 1375 aa17.56■□□□□ 0.4
TMEM248-201ENST00000341567 GRIN2BQ13224 1484 aa17.56■□□□□ 0.4
TMEM248-201ENST00000341567 KIF15Q9NS87 1388 aa17.54■□□□□ 0.4
TMEM248-201ENST00000341567 CCDC144AA2RUR9 1427 aa17.54■□□□□ 0.4
TMEM248-201ENST00000341567 MAPK8IP3Q9UPT6 1336 aa17.54■□□□□ 0.4
TMEM248-201ENST00000341567 WDR62O43379 1518 aa17.54■□□□□ 0.4
TMEM248-201ENST00000341567 UACAQ9BZF9 1416 aa17.53■□□□□ 0.4
TMEM248-201ENST00000341567 RSPH4AQ5TD94 716 aa17.53■□□□□ 0.4
TMEM248-201ENST00000341567 KIF7Q2M1P5 1343 aa17.52■□□□□ 0.4
TMEM248-201ENST00000341567 U2AF1L5P0DN76 240 aaPredicted RBP17.52■□□□□ 0.4
TMEM248-201ENST00000341567 U2AF1Q01081 240 aaKnown RBP eCLIP17.52■□□□□ 0.46e-7■□□□□ 8.1
TMEM248-201ENST00000341567 FTSJ3Q8IY81 847 aaKnown RBP17.52■□□□□ 0.39
TMEM248-201ENST00000341567 RRP7AQ9Y3A4 280 aaKnown RBP17.52■□□□□ 0.39
TMEM248-201ENST00000341567 NBPF1Q3BBV0 1214 aa17.51■□□□□ 0.39
TMEM248-201ENST00000341567 PLIN1O60240 522 aa17.51■□□□□ 0.39
TMEM248-201ENST00000341567 CCDC184Q52MB2 194 aa17.5■□□□□ 0.39
TMEM248-201ENST00000341567 RCAN3Q9UKA8 241 aa17.5■□□□□ 0.39
TMEM248-201ENST00000341567 OSCARQ8IYS5 282 aa17.5■□□□□ 0.39
TMEM248-201ENST00000341567 IPO9Q96P70 1041 aaKnown RBP17.5■□□□□ 0.39
TMEM248-201ENST00000341567 NUDCQ9Y266 331 aa17.5■□□□□ 0.39
TMEM248-201ENST00000341567 ANKRD50Q9ULJ7 1429 aa17.49■□□□□ 0.39
TMEM248-201ENST00000341567 CDK13Q14004 1512 aaKnown RBP17.49■□□□□ 0.39
TMEM248-201ENST00000341567 ERICH6BQ5W0A0 696 aa17.49■□□□□ 0.39
TMEM248-201ENST00000341567 ANP32BQ92688 251 aaKnown RBP17.48■□□□□ 0.39
TMEM248-201ENST00000341567 NLRP13Q86W25 1043 aa17.48■□□□□ 0.39
TMEM248-201ENST00000341567 SNAPC4Q5SXM2 1469 aa17.47■□□□□ 0.39
TMEM248-201ENST00000341567 RALBP1Q15311 655 aa17.47■□□□□ 0.39
TMEM248-201ENST00000341567 FYCO1Q9BQS8 1478 aa17.46■□□□□ 0.39
TMEM248-201ENST00000341567 CLUAP1Q96AJ1 413 aa17.46■□□□□ 0.39
TMEM248-201ENST00000341567 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.46■□□□□ 0.39
TMEM248-201ENST00000341567 TMEM132EQ6IEE7 984 aa17.45■□□□□ 0.38
TMEM248-201ENST00000341567 BECN1Q14457 450 aa17.45■□□□□ 0.38
TMEM248-201ENST00000341567 CUL7Q14999 1698 aa17.45■□□□□ 0.38
TMEM248-201ENST00000341567 TIAM1Q13009 1591 aa17.44■□□□□ 0.38
TMEM248-201ENST00000341567 FANCIQ9NVI1 1328 aa17.43■□□□□ 0.38
TMEM248-201ENST00000341567 SPRYD3Q8NCJ5 442 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms