RNA–Protein interactions for RNA: ENST00000341259.6

SH2B3-201, Transcript of SH2B adaptor protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2B3, Length 5,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2B3-201ENST00000341259 B4GALNT3Q6L9W6 998 aa25.06■■□□□ 1.6
SH2B3-201ENST00000341259 SAFB2Q14151 953 aaKnown RBP eCLIP25.05■■□□□ 1.6
SH2B3-201ENST00000341259 IGF1RP08069 1367 aa25.05■■□□□ 1.6
SH2B3-201ENST00000341259 PNNQ9H307 717 aaKnown RBP25.03■■□□□ 1.6
SH2B3-201ENST00000341259 HDGFP51858 240 aaKnown RBP25.03■■□□□ 1.6
SH2B3-201ENST00000341259 RSPH4AQ5TD94 716 aa25.02■■□□□ 1.6
SH2B3-201ENST00000341259 RGS3P49796 1198 aa25■■□□□ 1.59
SH2B3-201ENST00000341259 NCAPD3P42695 1498 aa25■■□□□ 1.59
SH2B3-201ENST00000341259 RAD54L2Q9Y4B4 1467 aa25■■□□□ 1.59
SH2B3-201ENST00000341259 HAP1P54257 671 aaPredicted RBP25■■□□□ 1.59
SH2B3-201ENST00000341259 RALBP1Q15311 655 aa24.99■■□□□ 1.59
SH2B3-201ENST00000341259 STK26Q9P289 416 aa24.99■■□□□ 1.59
SH2B3-201ENST00000341259 GAPVD1Q14C86 1478 aa24.98■■□□□ 1.59
SH2B3-201ENST00000341259 KIF3BO15066 747 aa24.98■■□□□ 1.59
SH2B3-201ENST00000341259 MS4A1P11836 297 aa24.96■■□□□ 1.59
SH2B3-201ENST00000341259 LMOD2Q6P5Q4 547 aa24.96■■□□□ 1.59
SH2B3-201ENST00000341259 SPAG9O60271 1321 aaKnown RBP24.96■■□□□ 1.59
SH2B3-201ENST00000341259 CASC1Q6TDU7 716 aa24.93■■□□□ 1.58
SH2B3-201ENST00000341259 KIF21BO75037 1637 aa24.92■■□□□ 1.58
SH2B3-201ENST00000341259 CHMP4BQ9H444 224 aaKnown RBP24.91■■□□□ 1.58
SH2B3-201ENST00000341259 EIF3AQ14152 1382 aaKnown RBP24.91■■□□□ 1.58
SH2B3-201ENST00000341259 HDGFL2Q7Z4V5 671 aaPredicted RBP24.89■■□□□ 1.57
SH2B3-201ENST00000341259 EIF5BO60841 1220 aaKnown RBP24.89■■□□□ 1.57
SH2B3-201ENST00000341259 TRHP20396 242 aaPredicted RBP24.88■■□□□ 1.57
SH2B3-201ENST00000341259 ANP32EQ9BTT0 268 aa24.87■■□□□ 1.57
SH2B3-201ENST00000341259 PTPRGP23470 1445 aa24.87■■□□□ 1.57
SH2B3-201ENST00000341259 SOX12O15370 315 aa24.85■■□□□ 1.57
SH2B3-201ENST00000341259 GOLGA6L22H0YM25 854 aa24.83■■□□□ 1.57
SH2B3-201ENST00000341259 NOP58Q9Y2X3 529 aaKnown RBP24.81■■□□□ 1.56
SH2B3-201ENST00000341259 NCLP19338 710 aaKnown RBP24.8■■□□□ 1.56
SH2B3-201ENST00000341259 RCAN3Q9UKA8 241 aa24.8■■□□□ 1.56
SH2B3-201ENST00000341259 SYNJ1O43426 1573 aa24.8■■□□□ 1.56
SH2B3-201ENST00000341259 CCDC144AA2RUR9 1427 aa24.79■■□□□ 1.56
SH2B3-201ENST00000341259 WASHC2CQ9Y4E1 1318 aa24.78■■□□□ 1.56
SH2B3-201ENST00000341259 ERICH6BQ5W0A0 696 aa24.78■■□□□ 1.56
SH2B3-201ENST00000341259 FGD6Q6ZV73 1430 aa24.77■■□□□ 1.56
SH2B3-201ENST00000341259 U2AF1L5P0DN76 240 aaPredicted RBP24.77■■□□□ 1.56
SH2B3-201ENST00000341259 U2AF1Q01081 240 aaKnown RBP eCLIP24.77■■□□□ 1.56
SH2B3-201ENST00000341259 CUX1P39880 1505 aa24.76■■□□□ 1.55
SH2B3-201ENST00000341259 LRRC9Q6ZRR7 1453 aa24.75■■□□□ 1.55
SH2B3-201ENST00000341259 MYOM3Q5VTT5 1437 aa24.74■■□□□ 1.55
SH2B3-201ENST00000341259 NUTM2DQ5VT03 806 aaPredicted RBP24.74■■□□□ 1.55
SH2B3-201ENST00000341259 PHLDB1Q86UU1 1377 aa24.74■■□□□ 1.55
SH2B3-201ENST00000341259 ERICH3Q5RHP9 1530 aa24.74■■□□□ 1.55
SH2B3-201ENST00000341259 AQRO60306 1485 aaKnown RBP eCLIP24.73■■□□□ 1.552e-6■■■■□ 20.8
SH2B3-201ENST00000341259 CFTRP13569 1480 aa24.73■■□□□ 1.55
SH2B3-201ENST00000341259 NLRP13Q86W25 1043 aa24.73■■□□□ 1.55
SH2B3-201ENST00000341259 ST20-MTHFSA0A0A6YYL1 179 aa24.72■■□□□ 1.55
SH2B3-201ENST00000341259 KIF15Q9NS87 1388 aa24.72■■□□□ 1.55
SH2B3-201ENST00000341259 OS9Q13438 667 aaPredicted RBP24.7■■□□□ 1.54
SH2B3-201ENST00000341259 CASKIN1Q8WXD9 1431 aa24.69■■□□□ 1.54
SH2B3-201ENST00000341259 RTF1Q92541 710 aaKnown RBP24.69■■□□□ 1.54
SH2B3-201ENST00000341259 RBM19Q9Y4C8 960 aaKnown RBP24.68■■□□□ 1.54
SH2B3-201ENST00000341259 TERF2IPQ9NYB0 399 aa24.66■■□□□ 1.54
SH2B3-201ENST00000341259 IPO8O15397 1037 aaKnown RBP24.65■■□□□ 1.54
SH2B3-201ENST00000341259 MYBBP1AQ9BQG0 1328 aaKnown RBP24.65■■□□□ 1.54
SH2B3-201ENST00000341259 USP47Q96K76 1375 aa24.65■■□□□ 1.54
SH2B3-201ENST00000341259 ARAP1Q96P48 1450 aa24.64■■□□□ 1.54
SH2B3-201ENST00000341259 HSP90AB1P08238 724 aaKnown RBP24.64■■□□□ 1.53
SH2B3-201ENST00000341259 CCDC146Q8IYE0 955 aa24.63■■□□□ 1.53
SH2B3-201ENST00000341259 TRIM44Q96DX7 344 aaPredicted RBP24.63■■□□□ 1.53
SH2B3-201ENST00000341259 ZNF644Q9H582 1327 aaPredicted RBP24.63■■□□□ 1.53
SH2B3-201ENST00000341259 CALD1Q05682 793 aaKnown RBP24.63■■□□□ 1.53
SH2B3-201ENST00000341259 TRAK1Q9UPV9 953 aa24.63■■□□□ 1.53
SH2B3-201ENST00000341259 UACAQ9BZF9 1416 aa24.63■■□□□ 1.53
SH2B3-201ENST00000341259 GOLGA2Q08379 1002 aa24.62■■□□□ 1.53
SH2B3-201ENST00000341259 PANK3Q9H999 370 aa24.62■■□□□ 1.53
SH2B3-201ENST00000341259 NCOA2Q15596 1464 aa24.62■■□□□ 1.53
SH2B3-201ENST00000341259 PRDM2Q13029 1718 aa24.62■■□□□ 1.53
SH2B3-201ENST00000341259 FYCO1Q9BQS8 1478 aa24.61■■□□□ 1.53
SH2B3-201ENST00000341259 TOP2BQ02880 1626 aa24.6■■□□□ 1.53
SH2B3-201ENST00000341259 PAK3O75914 559 aaPredicted RBP24.6■■□□□ 1.53
SH2B3-201ENST00000341259 PDE3BQ13370 1112 aa24.6■■□□□ 1.53
SH2B3-201ENST00000341259 PRKRIP1Q9H875 184 aaPredicted RBP24.59■■□□□ 1.53
SH2B3-201ENST00000341259 GRIN2BQ13224 1484 aa24.58■■□□□ 1.53
SH2B3-201ENST00000341259 HMGXB3Q12766 1538 aa24.58■■□□□ 1.52
SH2B3-201ENST00000341259 GLIPR1L2Q4G1C9 344 aa24.57■■□□□ 1.52
SH2B3-201ENST00000341259 ITPRIPQ8IWB1 547 aa24.57■■□□□ 1.52
SH2B3-201ENST00000341259 TPRNQ4KMQ1 711 aa24.56■■□□□ 1.52
SH2B3-201ENST00000341259 HSCBQ8IWL3 235 aa24.56■■□□□ 1.52
SH2B3-201ENST00000341259 NESP48681 1621 aa24.56■■□□□ 1.52
SH2B3-201ENST00000341259 RWDD1Q9H446 243 aaPredicted RBP24.54■■□□□ 1.52
SH2B3-201ENST00000341259 TCERG1O14776 1098 aaKnown RBP24.53■■□□□ 1.52
SH2B3-201ENST00000341259 PRXQ9BXM0 1461 aa24.53■■□□□ 1.52
SH2B3-201ENST00000341259 EID1Q9Y6B2 187 aa24.53■■□□□ 1.52
SH2B3-201ENST00000341259 RRBP1Q9P2E9 1410 aaKnown RBP24.52■■□□□ 1.52
SH2B3-201ENST00000341259 KCNJ4P48050 445 aa24.5■■□□□ 1.51
SH2B3-201ENST00000341259 SMC4Q9NTJ3 1288 aa24.5■■□□□ 1.51
SH2B3-201ENST00000341259 CC2D2AQ9P2K1 1620 aa24.49■■□□□ 1.51
SH2B3-201ENST00000341259 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.49■■□□□ 1.51
SH2B3-201ENST00000341259 OSCARQ8IYS5 282 aa24.48■■□□□ 1.51
SH2B3-201ENST00000341259 CENPJQ9HC77 1338 aaPredicted RBP24.48■■□□□ 1.51
SH2B3-201ENST00000341259 VGFO15240 615 aaPredicted RBP24.48■■□□□ 1.51
SH2B3-201ENST00000341259 EFCAB5A4FU69 1503 aa24.48■■□□□ 1.51
SH2B3-201ENST00000341259 PMFBP1Q8TBY8 1022 aa24.47■■□□□ 1.51
SH2B3-201ENST00000341259 APBB1O00213 710 aa24.47■■□□□ 1.51
SH2B3-201ENST00000341259 TOPBP1Q92547 1522 aa24.47■■□□□ 1.51
SH2B3-201ENST00000341259 CFAP44Q96MT7 982 aa24.46■■□□□ 1.51
SH2B3-201ENST00000341259 ZRSR1Q15695 479 aaKnown RBP24.46■■□□□ 1.51
SH2B3-201ENST00000341259 TSHZ2Q9NRE2 1034 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms