RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 EXOC6Q8TAG9 804 aa19.09■□□□□ 0.65
RRP1B-201ENST00000340648 PDE4AP27815 886 aa19.09■□□□□ 0.65
RRP1B-201ENST00000340648 NUP155O75694 1391 aa19.09■□□□□ 0.65
RRP1B-201ENST00000340648 NLRP13Q86W25 1043 aa19.08■□□□□ 0.64
RRP1B-201ENST00000340648 L1TD1Q5T7N2 865 aaKnown RBP19.07■□□□□ 0.64
RRP1B-201ENST00000340648 HSP90AB1P08238 724 aaKnown RBP19.06■□□□□ 0.64
RRP1B-201ENST00000340648 RRBP1Q9P2E9 1410 aaKnown RBP19.06■□□□□ 0.64
RRP1B-201ENST00000340648 MAPK8IP3Q9UPT6 1336 aa19.05■□□□□ 0.64
RRP1B-201ENST00000340648 PLIN1O60240 522 aa19.05■□□□□ 0.64
RRP1B-201ENST00000340648 ARAP1Q96P48 1450 aa19.05■□□□□ 0.64
RRP1B-201ENST00000340648 SLC4A3P48751 1232 aa19.04■□□□□ 0.64
RRP1B-201ENST00000340648 RRP1P56182 461 aaKnown RBP19.04■□□□□ 0.64
RRP1B-201ENST00000340648 PDE3BQ13370 1112 aa19.04■□□□□ 0.64
RRP1B-201ENST00000340648 HSCBQ8IWL3 235 aa19.03■□□□□ 0.64
RRP1B-201ENST00000340648 NPM1P06748 294 aaKnown RBP eCLIP19.02■□□□□ 0.64
RRP1B-201ENST00000340648 MYBBP1AQ9BQG0 1328 aaKnown RBP19.02■□□□□ 0.64
RRP1B-201ENST00000340648 KIF15Q9NS87 1388 aa19.02■□□□□ 0.64
RRP1B-201ENST00000340648 ST20-MTHFSA0A0A6YYL1 179 aa19.02■□□□□ 0.64
RRP1B-201ENST00000340648 GZF1Q9H116 711 aaPredicted RBP19.02■□□□□ 0.64
RRP1B-201ENST00000340648 WASHC2AQ641Q2 1341 aa19.02■□□□□ 0.63
RRP1B-201ENST00000340648 U2SURPO15042 1029 aaKnown RBP19.01■□□□□ 0.63
RRP1B-201ENST00000340648 USP35Q9P2H5 1018 aa19.01■□□□□ 0.63
RRP1B-201ENST00000340648 PTMAP06454 111 aaKnown RBP19.01■□□□□ 0.63
RRP1B-201ENST00000340648 ANKRD30AQ9BXX3 1397 aa19■□□□□ 0.63
RRP1B-201ENST00000340648 LRRC9Q6ZRR7 1453 aa19■□□□□ 0.63
RRP1B-201ENST00000340648 CCDC7Q96M83 1385 aa18.99■□□□□ 0.63
RRP1B-201ENST00000340648 SYNJ1O43426 1573 aa18.99■□□□□ 0.63
RRP1B-201ENST00000340648 IGF1RP08069 1367 aa18.99■□□□□ 0.63
RRP1B-201ENST00000340648 TPRNQ4KMQ1 711 aa18.99■□□□□ 0.63
RRP1B-201ENST00000340648 ESF1Q9H501 851 aaKnown RBP18.99■□□□□ 0.63
RRP1B-201ENST00000340648 GOLGA2Q08379 1002 aa18.98■□□□□ 0.63
RRP1B-201ENST00000340648 USP47Q96K76 1375 aa18.98■□□□□ 0.63
RRP1B-201ENST00000340648 MS4A1P11836 297 aa18.98■□□□□ 0.63
RRP1B-201ENST00000340648 CADPSQ9ULU8 1353 aa18.97■□□□□ 0.63
RRP1B-201ENST00000340648 CNTLNQ9NXG0 1405 aa18.97■□□□□ 0.63
RRP1B-201ENST00000340648 FGD6Q6ZV73 1430 aa18.97■□□□□ 0.63
RRP1B-201ENST00000340648 UACAQ9BZF9 1416 aa18.97■□□□□ 0.63
RRP1B-201ENST00000340648 KIF7Q2M1P5 1343 aa18.97■□□□□ 0.63
RRP1B-201ENST00000340648 MORC1Q86VD1 984 aa18.97■□□□□ 0.63
RRP1B-201ENST00000340648 CCDC146Q8IYE0 955 aa18.97■□□□□ 0.63
RRP1B-201ENST00000340648 CRBNQ96SW2 442 aa18.96■□□□□ 0.63
RRP1B-201ENST00000340648 DNTTIP2Q5QJE6 756 aaKnown RBP18.95■□□□□ 0.62
RRP1B-201ENST00000340648 CASC1Q6TDU7 716 aa18.94■□□□□ 0.62
RRP1B-201ENST00000340648 ARID4BQ4LE39 1312 aaPredicted RBP18.94■□□□□ 0.62
RRP1B-201ENST00000340648 GSE1Q14687 1217 aa18.94■□□□□ 0.62
RRP1B-201ENST00000340648 WDR97A6NE52 1622 aa18.9■□□□□ 0.62
RRP1B-201ENST00000340648 FAM161AQ3B820 660 aa18.9■□□□□ 0.62
RRP1B-201ENST00000340648 CENPQQ7L2Z9 268 aaPredicted RBP18.9■□□□□ 0.62
RRP1B-201ENST00000340648 PNNQ9H307 717 aaKnown RBP18.89■□□□□ 0.61
RRP1B-201ENST00000340648 RWDD1Q9H446 243 aaPredicted RBP18.89■□□□□ 0.61
RRP1B-201ENST00000340648 PAK3O75914 559 aaPredicted RBP18.89■□□□□ 0.61
RRP1B-201ENST00000340648 PANK3Q9H999 370 aa18.89■□□□□ 0.61
RRP1B-201ENST00000340648 PLPPR3Q6T4P5 718 aa18.89■□□□□ 0.61
RRP1B-201ENST00000340648 ERICH3Q5RHP9 1530 aa18.88■□□□□ 0.61
RRP1B-201ENST00000340648 CLUAP1Q96AJ1 413 aa18.88■□□□□ 0.61
RRP1B-201ENST00000340648 HNRNPMP52272 730 aaKnown RBP eCLIP18.88■□□□□ 0.612e-10■■■■□ 23.7
RRP1B-201ENST00000340648 MFAP1P55081 439 aaKnown RBP18.88■□□□□ 0.61
RRP1B-201ENST00000340648 GOLGA6L3A6NEY3 463 aa18.87■□□□□ 0.61
RRP1B-201ENST00000340648 MYOM3Q5VTT5 1437 aa18.86■□□□□ 0.61
RRP1B-201ENST00000340648 MSH5O43196 834 aa18.85■□□□□ 0.61
RRP1B-201ENST00000340648 CCDC184Q52MB2 194 aa18.85■□□□□ 0.61
RRP1B-201ENST00000340648 PMFBP1Q8TBY8 1022 aa18.85■□□□□ 0.61
RRP1B-201ENST00000340648 CHMP4BQ9H444 224 aaKnown RBP18.84■□□□□ 0.61
RRP1B-201ENST00000340648 CENPJQ9HC77 1338 aaPredicted RBP18.84■□□□□ 0.61
RRP1B-201ENST00000340648 MSNP26038 577 aaKnown RBP18.84■□□□□ 0.61
RRP1B-201ENST00000340648 ITPRIPQ8IWB1 547 aa18.84■□□□□ 0.61
RRP1B-201ENST00000340648 PLCB2Q00722 1185 aa18.84■□□□□ 0.61
RRP1B-201ENST00000340648 POGKQ9P215 609 aa18.84■□□□□ 0.61
RRP1B-201ENST00000340648 U2AF1L5P0DN76 240 aaPredicted RBP18.83■□□□□ 0.61
RRP1B-201ENST00000340648 U2AF1Q01081 240 aaKnown RBP eCLIP18.83■□□□□ 0.61
RRP1B-201ENST00000340648 SAFB2Q14151 953 aaKnown RBP eCLIP18.83■□□□□ 0.61
RRP1B-201ENST00000340648 FGD5Q6ZNL6 1462 aa18.83■□□□□ 0.61
RRP1B-201ENST00000340648 PRXQ9BXM0 1461 aa18.82■□□□□ 0.6
RRP1B-201ENST00000340648 AKNAQ7Z591 1439 aa18.81■□□□□ 0.6
RRP1B-201ENST00000340648 GBP4Q96PP9 640 aa18.81■□□□□ 0.6
RRP1B-201ENST00000340648 KANK1Q14678 1352 aa18.79■□□□□ 0.6
RRP1B-201ENST00000340648 SRPK2P78362 688 aaKnown RBP18.78■□□□□ 0.6
RRP1B-201ENST00000340648 ZNF644Q9H582 1327 aaPredicted RBP18.78■□□□□ 0.6
RRP1B-201ENST00000340648 CARMIL2Q6F5E8 1435 aa18.78■□□□□ 0.6
RRP1B-201ENST00000340648 PDS5BQ9NTI5 1447 aa18.77■□□□□ 0.6
RRP1B-201ENST00000340648 NCOA2Q15596 1464 aa18.77■□□□□ 0.59
RRP1B-201ENST00000340648 CASKIN1Q8WXD9 1431 aa18.77■□□□□ 0.59
RRP1B-201ENST00000340648 RRP7AQ9Y3A4 280 aaKnown RBP18.77■□□□□ 0.59
RRP1B-201ENST00000340648 SMC4Q9NTJ3 1288 aa18.76■□□□□ 0.59
RRP1B-201ENST00000340648 CUX1P39880 1505 aa18.76■□□□□ 0.59
RRP1B-201ENST00000340648 FANCD2Q9BXW9 1451 aa18.76■□□□□ 0.59
RRP1B-201ENST00000340648 IPO8O15397 1037 aaKnown RBP18.76■□□□□ 0.59
RRP1B-201ENST00000340648 BCL2L13Q9BXK5 485 aa18.75■□□□□ 0.59
RRP1B-201ENST00000340648 NFKBIBQ15653 356 aa18.75■□□□□ 0.59
RRP1B-201ENST00000340648 CCDC144AA2RUR9 1427 aa18.75■□□□□ 0.59
RRP1B-201ENST00000340648 RAD54L2Q9Y4B4 1467 aa18.75■□□□□ 0.59
RRP1B-201ENST00000340648 APBB1O00213 710 aa18.75■□□□□ 0.59
RRP1B-201ENST00000340648 COG6Q9Y2V7 657 aa18.75■□□□□ 0.59
RRP1B-201ENST00000340648 FOXD4L1Q9NU39 408 aa18.74■□□□□ 0.59
RRP1B-201ENST00000340648 CDCA7LQ96GN5 454 aa18.73■□□□□ 0.59
RRP1B-201ENST00000340648 IL27Q8NEV9 243 aa18.73■□□□□ 0.59
RRP1B-201ENST00000340648 ERCC6Q03468 1493 aa18.73■□□□□ 0.59
RRP1B-201ENST00000340648 ZBTB7CA1YPR0 619 aa18.72■□□□□ 0.59
RRP1B-201ENST00000340648 NBPF8Q3BBV2 869 aa18.72■□□□□ 0.59
RRP1B-201ENST00000340648 APAF1O14727 1248 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms