RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 PCF11O94913 1555 aaKnown RBP12.7□□□□□ -0.38
NECAP1-201ENST00000339754 PTPN23Q9H3S7 1636 aa12.7□□□□□ -0.38
NECAP1-201ENST00000339754 NEFMP07197 916 aa12.7□□□□□ -0.38
NECAP1-201ENST00000339754 CCDC7Q96M83 1385 aa12.7□□□□□ -0.38
NECAP1-201ENST00000339754 NCOA1Q15788 1441 aa12.69□□□□□ -0.38
NECAP1-201ENST00000339754 TARBP1Q13395 1621 aaKnown RBP12.69□□□□□ -0.38
NECAP1-201ENST00000339754 NUDCQ9Y266 331 aa12.69□□□□□ -0.38
NECAP1-201ENST00000339754 FGD6Q6ZV73 1430 aa12.67□□□□□ -0.38
NECAP1-201ENST00000339754 NAIPQ13075 1403 aa12.67□□□□□ -0.38
NECAP1-201ENST00000339754 LAS1LQ9Y4W2 734 aaKnown RBP12.67□□□□□ -0.38
NECAP1-201ENST00000339754 ATP1B4Q9UN42 357 aaPredicted RBP12.65□□□□□ -0.38
NECAP1-201ENST00000339754 NPM2Q86SE8 214 aaKnown RBP12.64□□□□□ -0.39
NECAP1-201ENST00000339754 PPM1GO15355 546 aaPredicted RBP12.63□□□□□ -0.39
NECAP1-201ENST00000339754 BRPF3Q9ULD4 1205 aa12.63□□□□□ -0.39
NECAP1-201ENST00000339754 DENND4BO75064 1496 aaPredicted RBP12.63□□□□□ -0.39
NECAP1-201ENST00000339754 ERCC6Q03468 1493 aa12.63□□□□□ -0.39
NECAP1-201ENST00000339754 FYCO1Q9BQS8 1478 aa12.62□□□□□ -0.39
NECAP1-201ENST00000339754 FHOD3Q2V2M9 1422 aa12.62□□□□□ -0.39
NECAP1-201ENST00000339754 TCERG1O14776 1098 aaKnown RBP12.62□□□□□ -0.39
NECAP1-201ENST00000339754 PDE4AP27815 886 aa12.62□□□□□ -0.39
NECAP1-201ENST00000339754 CTTNBP2Q8WZ74 1663 aa12.62□□□□□ -0.39
NECAP1-201ENST00000339754 FMN1Q68DA7 1419 aa12.61□□□□□ -0.39
NECAP1-201ENST00000339754 CASKIN1Q8WXD9 1431 aa12.61□□□□□ -0.39
NECAP1-201ENST00000339754 BACH2Q9BYV9 841 aa12.61□□□□□ -0.39
NECAP1-201ENST00000339754 WDR62O43379 1518 aa12.6□□□□□ -0.39
NECAP1-201ENST00000339754 KIF7Q2M1P5 1343 aa12.6□□□□□ -0.39
NECAP1-201ENST00000339754 L3MBTL2Q969R5 705 aa12.6□□□□□ -0.39
NECAP1-201ENST00000339754 GSE1Q14687 1217 aa12.59□□□□□ -0.39
NECAP1-201ENST00000339754 ZNF608Q9ULD9 1512 aaPredicted RBP12.59□□□□□ -0.39
NECAP1-201ENST00000339754 PBRM1Q86U86 1689 aa12.58□□□□□ -0.39
NECAP1-201ENST00000339754 SPATA31E1Q6ZUB1 1445 aa12.58□□□□□ -0.4
NECAP1-201ENST00000339754 IFT140Q96RY7 1462 aa12.57□□□□□ -0.4
NECAP1-201ENST00000339754 EFCAB5A4FU69 1503 aa12.57□□□□□ -0.4
NECAP1-201ENST00000339754 MS4A1P11836 297 aa12.57□□□□□ -0.4
NECAP1-201ENST00000339754 POLR1AO95602 1720 aaPredicted RBP12.56□□□□□ -0.4
NECAP1-201ENST00000339754 DHX29Q7Z478 1369 aaKnown RBP12.56□□□□□ -0.4
NECAP1-201ENST00000339754 NBPF8Q3BBV2 869 aa12.56□□□□□ -0.4
NECAP1-201ENST00000339754 GRIN2BQ13224 1484 aa12.55□□□□□ -0.4
NECAP1-201ENST00000339754 EXOC6Q8TAG9 804 aa12.55□□□□□ -0.4
NECAP1-201ENST00000339754 EIF5BO60841 1220 aaKnown RBP12.54□□□□□ -0.4
NECAP1-201ENST00000339754 PNISRQ8TF01 805 aaKnown RBP12.54□□□□□ -0.4
NECAP1-201ENST00000339754 HECW1Q76N89 1606 aa12.54□□□□□ -0.4
NECAP1-201ENST00000339754 SENP3-EIF4A1A0A087X0R7 540 aa12.53□□□□□ -0.4
NECAP1-201ENST00000339754 NFKBIBQ15653 356 aa12.53□□□□□ -0.4
NECAP1-201ENST00000339754 ADAMTS12P58397 1594 aa12.53□□□□□ -0.4
NECAP1-201ENST00000339754 MYOM3Q5VTT5 1437 aa12.52□□□□□ -0.4
NECAP1-201ENST00000339754 RRP1P56182 461 aaKnown RBP12.52□□□□□ -0.4
NECAP1-201ENST00000339754 FRAT1Q92837 279 aaPredicted RBP12.52□□□□□ -0.4
NECAP1-201ENST00000339754 THOC2Q8NI27 1593 aaKnown RBP12.52□□□□□ -0.41
NECAP1-201ENST00000339754 MPHOSPH9Q99550 1183 aa12.52□□□□□ -0.41
NECAP1-201ENST00000339754 RRP7BPQ9NSQ0 103 aa12.52□□□□□ -0.41
NECAP1-201ENST00000339754 MTUS2Q5JR59 1369 aa12.52□□□□□ -0.41
NECAP1-201ENST00000339754 SAMD9Q5K651 1589 aa12.5□□□□□ -0.41
NECAP1-201ENST00000339754 DDRGK1Q96HY6 314 aa12.5□□□□□ -0.41
NECAP1-201ENST00000339754 KDM6BO15054 1643 aa12.49□□□□□ -0.41
NECAP1-201ENST00000339754 SNAPC4Q5SXM2 1469 aa12.49□□□□□ -0.41
NECAP1-201ENST00000339754 EIF4G3O43432 1585 aaKnown RBP12.49□□□□□ -0.41
NECAP1-201ENST00000339754 GCC2Q8IWJ2 1684 aa12.48□□□□□ -0.41
NECAP1-201ENST00000339754 RSPH6AQ9H0K4 717 aa12.48□□□□□ -0.41
NECAP1-201ENST00000339754 CNGB1Q14028 1251 aaPredicted RBP12.47□□□□□ -0.41
NECAP1-201ENST00000339754 TEX14Q8IWB6 1497 aa12.47□□□□□ -0.41
NECAP1-201ENST00000339754 CHIC2Q9UKJ5 165 aa12.47□□□□□ -0.41
NECAP1-201ENST00000339754 FAM43AQ8N2R8 423 aa12.46□□□□□ -0.41
NECAP1-201ENST00000339754 LRPPRCP42704 1394 aaKnown RBP12.46□□□□□ -0.41
NECAP1-201ENST00000339754 ANKRD30BQ9BXX2 1392 aa12.46□□□□□ -0.41
NECAP1-201ENST00000339754 RPRD2Q5VT52 1461 aaKnown RBP12.46□□□□□ -0.41
NECAP1-201ENST00000339754 IQGAP2Q13576 1575 aa12.46□□□□□ -0.42
NECAP1-201ENST00000339754 LRRIQ1Q96JM4 1722 aa12.46□□□□□ -0.42
NECAP1-201ENST00000339754 RCAN3Q9UKA8 241 aa12.46□□□□□ -0.42
NECAP1-201ENST00000339754 TMC1Q8TDI8 760 aa12.45□□□□□ -0.42
NECAP1-201ENST00000339754 MIA2Q96PC5 1412 aa12.44□□□□□ -0.42
NECAP1-201ENST00000339754 SLC4A3P48751 1232 aa12.44□□□□□ -0.42
NECAP1-201ENST00000339754 BCORL1Q5H9F3 1711 aa12.44□□□□□ -0.42
NECAP1-201ENST00000339754 FBLN2P98095 1184 aa12.43□□□□□ -0.42
NECAP1-201ENST00000339754 DCAF11Q8TEB1 546 aa12.43□□□□□ -0.42
NECAP1-201ENST00000339754 SUPT6HQ7KZ85 1726 aaKnown RBP12.43□□□□□ -0.42
NECAP1-201ENST00000339754 SKAP1Q86WV1 359 aa12.43□□□□□ -0.42
NECAP1-201ENST00000339754 TCOF1Q13428 1488 aaKnown RBP12.43□□□□□ -0.42
NECAP1-201ENST00000339754 ARHGEF11O15085 1522 aa12.42□□□□□ -0.42
NECAP1-201ENST00000339754 CHMP7Q8WUX9 453 aaPredicted RBP12.42□□□□□ -0.42
NECAP1-201ENST00000339754 UGGT2Q9NYU1 1516 aa12.42□□□□□ -0.42
NECAP1-201ENST00000339754 GRIN2AQ12879 1464 aa12.42□□□□□ -0.42
NECAP1-201ENST00000339754 ARID4BQ4LE39 1312 aaPredicted RBP12.4□□□□□ -0.42
NECAP1-201ENST00000339754 FRAT2O75474 233 aaPredicted RBP12.39□□□□□ -0.43
NECAP1-201ENST00000339754 KIAA0586Q9BVV6 1533 aa12.39□□□□□ -0.43
NECAP1-201ENST00000339754 ARID3CA6NKF2 412 aa12.39□□□□□ -0.43
NECAP1-201ENST00000339754 MAGI1Q96QZ7 1491 aaPredicted RBP12.39□□□□□ -0.43
NECAP1-201ENST00000339754 EHBP1L1Q8N3D4 1523 aa12.39□□□□□ -0.43
NECAP1-201ENST00000339754 POLR3GLQ9BT43 218 aa12.38□□□□□ -0.43
NECAP1-201ENST00000339754 PDE3BQ13370 1112 aa12.38□□□□□ -0.43
NECAP1-201ENST00000339754 BRD4O60885 1362 aaPredicted RBP12.38□□□□□ -0.43
NECAP1-201ENST00000339754 PKNOX2Q96KN3 472 aa12.37□□□□□ -0.43
NECAP1-201ENST00000339754 SYNJ2O15056 1496 aa12.37□□□□□ -0.43
NECAP1-201ENST00000339754 USP47Q96K76 1375 aa12.37□□□□□ -0.43
NECAP1-201ENST00000339754 MAGI3Q5TCQ9 1506 aa12.37□□□□□ -0.43
NECAP1-201ENST00000339754 PLIN1O60240 522 aa12.36□□□□□ -0.43
NECAP1-201ENST00000339754 CRBNQ96SW2 442 aa12.35□□□□□ -0.43
NECAP1-201ENST00000339754 DAXXQ9UER7 740 aaPredicted RBP12.35□□□□□ -0.43
NECAP1-201ENST00000339754 MYBBP1AQ9BQG0 1328 aaKnown RBP12.35□□□□□ -0.43
NECAP1-201ENST00000339754 KIF15Q9NS87 1388 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms