RNA–Protein interactions for RNA: ENST00000328089.10

SPSB1-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB1, Length 3,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB1-201ENST00000328089 IQGAP2Q13576 1575 aa26.11■■□□□ 1.77
SPSB1-201ENST00000328089 PKD2Q13563 968 aa26.1■■□□□ 1.77
SPSB1-201ENST00000328089 ERCC6Q03468 1493 aa26.09■■□□□ 1.77
SPSB1-201ENST00000328089 TARBP1Q13395 1621 aaKnown RBP26.07■■□□□ 1.76
SPSB1-201ENST00000328089 DENND4BO75064 1496 aaPredicted RBP26.07■■□□□ 1.76
SPSB1-201ENST00000328089 JPH4Q96JJ6 628 aa26.06■■□□□ 1.76
SPSB1-201ENST00000328089 PLB1Q6P1J6 1458 aa26.03■■□□□ 1.76
SPSB1-201ENST00000328089 MRC2Q9UBG0 1479 aa26.03■■□□□ 1.76
SPSB1-201ENST00000328089 SALL2Q9Y467 1007 aaPredicted RBP26.03■■□□□ 1.76
SPSB1-201ENST00000328089 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.03■■□□□ 1.76
SPSB1-201ENST00000328089 HNRNPMP52272 730 aaKnown RBP eCLIP26.02■■□□□ 1.76
SPSB1-201ENST00000328089 PRKRIP1Q9H875 184 aaPredicted RBP26.01■■□□□ 1.75
SPSB1-201ENST00000328089 ABCC5O15440 1437 aa26.01■■□□□ 1.75
SPSB1-201ENST00000328089 RGL3Q3MIN7 710 aa26.01■■□□□ 1.75
SPSB1-201ENST00000328089 DAPK1P53355 1430 aa26■■□□□ 1.75
SPSB1-201ENST00000328089 PLEKHD1A6NEE1 506 aa26■■□□□ 1.75
SPSB1-201ENST00000328089 RBM19Q9Y4C8 960 aaKnown RBP26■■□□□ 1.75
SPSB1-201ENST00000328089 KIF7Q2M1P5 1343 aa25.99■■□□□ 1.75
SPSB1-201ENST00000328089 HECW1Q76N89 1606 aa25.99■■□□□ 1.75
SPSB1-201ENST00000328089 B4GALNT3Q6L9W6 998 aa25.95■■□□□ 1.75
SPSB1-201ENST00000328089 NUP153P49790 1475 aaKnown RBP25.95■■□□□ 1.74
SPSB1-201ENST00000328089 CCDC7Q96M83 1385 aa25.95■■□□□ 1.74
SPSB1-201ENST00000328089 ANKRD30BQ9BXX2 1392 aa25.95■■□□□ 1.74
SPSB1-201ENST00000328089 KDM5BQ9UGL1 1544 aa25.94■■□□□ 1.74
SPSB1-201ENST00000328089 ADAMTS12P58397 1594 aa25.92■■□□□ 1.74
SPSB1-201ENST00000328089 TSPY4P0CV99 314 aa25.91■■□□□ 1.74
SPSB1-201ENST00000328089 TSPY10P0CW01 314 aa25.91■■□□□ 1.74
SPSB1-201ENST00000328089 MIA2Q96PC5 1412 aa25.91■■□□□ 1.74
SPSB1-201ENST00000328089 DCAF11Q8TEB1 546 aa25.91■■□□□ 1.74
SPSB1-201ENST00000328089 WDR62O43379 1518 aa25.9■■□□□ 1.74
SPSB1-201ENST00000328089 DISP1Q96F81 1524 aa25.9■■□□□ 1.74
SPSB1-201ENST00000328089 NUP155O75694 1391 aa25.9■■□□□ 1.74
SPSB1-201ENST00000328089 PBRM1Q86U86 1689 aa25.9■■□□□ 1.74
SPSB1-201ENST00000328089 CARD11Q9BXL7 1154 aa25.89■■□□□ 1.73
SPSB1-201ENST00000328089 ARHGEF11O15085 1522 aa25.88■■□□□ 1.73
SPSB1-201ENST00000328089 KIAA0586Q9BVV6 1533 aa25.87■■□□□ 1.73
SPSB1-201ENST00000328089 TCOF1Q13428 1488 aaKnown RBP25.87■■□□□ 1.73
SPSB1-201ENST00000328089 GRIN2AQ12879 1464 aa25.85■■□□□ 1.73
SPSB1-201ENST00000328089 IFT140Q96RY7 1462 aa25.84■■□□□ 1.73
SPSB1-201ENST00000328089 CNTLNQ9NXG0 1405 aa25.84■■□□□ 1.73
SPSB1-201ENST00000328089 ST20-MTHFSA0A0A6YYL1 179 aa25.8■■□□□ 1.72
SPSB1-201ENST00000328089 USP47Q96K76 1375 aa25.78■■□□□ 1.72
SPSB1-201ENST00000328089 TMC1Q8TDI8 760 aa25.77■■□□□ 1.72
SPSB1-201ENST00000328089 TROQ12816 1431 aaPredicted RBP25.77■■□□□ 1.72
SPSB1-201ENST00000328089 NCOA1Q15788 1441 aa25.77■■□□□ 1.72
SPSB1-201ENST00000328089 CAMSAP2Q08AD1 1489 aa25.76■■□□□ 1.71
SPSB1-201ENST00000328089 RPRD2Q5VT52 1461 aaKnown RBP25.76■■□□□ 1.71
SPSB1-201ENST00000328089 KIAA0556O60303 1618 aa25.75■■□□□ 1.71
SPSB1-201ENST00000328089 ANKRD30AQ9BXX3 1397 aa25.75■■□□□ 1.71
SPSB1-201ENST00000328089 ANP32EQ9BTT0 268 aa25.75■■□□□ 1.71
SPSB1-201ENST00000328089 AKNAQ7Z591 1439 aa25.74■■□□□ 1.71
SPSB1-201ENST00000328089 ANKRD50Q9ULJ7 1429 aa25.73■■□□□ 1.71
SPSB1-201ENST00000328089 GPATCH8Q9UKJ3 1502 aaKnown RBP25.73■■□□□ 1.71
SPSB1-201ENST00000328089 CARMIL2Q6F5E8 1435 aa25.71■■□□□ 1.71
SPSB1-201ENST00000328089 ROCK1Q13464 1354 aa25.71■■□□□ 1.71
SPSB1-201ENST00000328089 MYT1LQ9UL68 1186 aa25.69■■□□□ 1.7
SPSB1-201ENST00000328089 EIF4G3O43432 1585 aaKnown RBP25.69■■□□□ 1.7
SPSB1-201ENST00000328089 KIF14Q15058 1648 aa25.68■■□□□ 1.7
SPSB1-201ENST00000328089 RAPGEF6Q8TEU7 1601 aa25.68■■□□□ 1.7
SPSB1-201ENST00000328089 PZPP20742 1482 aa25.67■■□□□ 1.7
SPSB1-201ENST00000328089 TEX14Q8IWB6 1497 aa25.67■■□□□ 1.7
SPSB1-201ENST00000328089 NBPF1Q3BBV0 1214 aa25.66■■□□□ 1.7
SPSB1-201ENST00000328089 GCC2Q8IWJ2 1684 aa25.66■■□□□ 1.7
SPSB1-201ENST00000328089 CC2D1BQ5T0F9 858 aaKnown RBP25.63■■□□□ 1.69
SPSB1-201ENST00000328089 KIAA1107Q9UPP5 1409 aa25.63■■□□□ 1.69
SPSB1-201ENST00000328089 ERICH6Q7L0X2 663 aa25.63■■□□□ 1.69
SPSB1-201ENST00000328089 KIF15Q9NS87 1388 aa25.62■■□□□ 1.69
SPSB1-201ENST00000328089 PPP4R2Q9NY27 417 aa25.62■■□□□ 1.69
SPSB1-201ENST00000328089 MSH5O43196 834 aa25.61■■□□□ 1.69
SPSB1-201ENST00000328089 CEP170Q5SW79 1584 aa25.6■■□□□ 1.69
SPSB1-201ENST00000328089 ZBED9Q6R2W3 1325 aa25.59■■□□□ 1.69
SPSB1-201ENST00000328089 C9orf84Q5VXU9 1444 aa25.59■■□□□ 1.69
SPSB1-201ENST00000328089 DNMT1P26358 1616 aaKnown RBP25.59■■□□□ 1.69
SPSB1-201ENST00000328089 SYNJ2O15056 1496 aa25.58■■□□□ 1.69
SPSB1-201ENST00000328089 PTPRGP23470 1445 aa25.58■■□□□ 1.69
SPSB1-201ENST00000328089 SPATA31E1Q6ZUB1 1445 aa25.57■■□□□ 1.68
SPSB1-201ENST00000328089 ROCK2O75116 1388 aaKnown RBP25.56■■□□□ 1.68
SPSB1-201ENST00000328089 ATP10BO94823 1461 aa25.56■■□□□ 1.68
SPSB1-201ENST00000328089 SENP3Q9H4L4 574 aaPredicted RBP25.54■■□□□ 1.68
SPSB1-201ENST00000328089 CCDC136Q96JN2 1154 aa25.53■■□□□ 1.68
SPSB1-201ENST00000328089 MAGI1Q96QZ7 1491 aaPredicted RBP25.5■■□□□ 1.67
SPSB1-201ENST00000328089 DHX29Q7Z478 1369 aaKnown RBP25.49■■□□□ 1.67
SPSB1-201ENST00000328089 PNISRQ8TF01 805 aaKnown RBP25.47■■□□□ 1.67
SPSB1-201ENST00000328089 NUDCQ9Y266 331 aa25.44■■□□□ 1.66
SPSB1-201ENST00000328089 CDCA7LQ96GN5 454 aa25.4■■□□□ 1.66
SPSB1-201ENST00000328089 PLIN1O60240 522 aa25.39■■□□□ 1.65
SPSB1-201ENST00000328089 AFAP1Q8N556 730 aa25.38■■□□□ 1.65
SPSB1-201ENST00000328089 NPM2Q86SE8 214 aaKnown RBP25.38■■□□□ 1.65
SPSB1-201ENST00000328089 CCDC144AA2RUR9 1427 aa25.37■■□□□ 1.65
SPSB1-201ENST00000328089 PANK3Q9H999 370 aa25.37■■□□□ 1.65
SPSB1-201ENST00000328089 BCORL1Q5H9F3 1711 aa25.37■■□□□ 1.65
SPSB1-201ENST00000328089 NUP160Q12769 1436 aa25.36■■□□□ 1.65
SPSB1-201ENST00000328089 NBR1Q14596 966 aa25.35■■□□□ 1.65
SPSB1-201ENST00000328089 SKAP1Q86WV1 359 aa25.34■■□□□ 1.65
SPSB1-201ENST00000328089 EXOC6Q8TAG9 804 aa25.31■■□□□ 1.64
SPSB1-201ENST00000328089 MYBBP1AQ9BQG0 1328 aaKnown RBP25.3■■□□□ 1.64
SPSB1-201ENST00000328089 ABCC10Q5T3U5 1492 aa25.29■■□□□ 1.64
SPSB1-201ENST00000328089 PRKCSHP14314 528 aaPredicted RBP25.28■■□□□ 1.64
SPSB1-201ENST00000328089 ARHGAP5Q13017 1502 aa25.28■■□□□ 1.64
SPSB1-201ENST00000328089 PLEKHH2Q8IVE3 1493 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms