RNA–Protein interactions for RNA: ENST00000309190.9

CAST-201, Transcript of calpastatin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAST, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-201ENST00000309190 PHLDB1Q86UU1 1377 aa7.15□□□□□ -1.26
CAST-201ENST00000309190 SYNJ2O15056 1496 aa7.15□□□□□ -1.26
CAST-201ENST00000309190 SAMD9Q5K651 1589 aa7.15□□□□□ -1.26
CAST-201ENST00000309190 STAG3Q9UJ98 1225 aa7.14□□□□□ -1.27
CAST-201ENST00000309190 WDR62O43379 1518 aa7.14□□□□□ -1.27
CAST-201ENST00000309190 SAFB2Q14151 953 aaKnown RBP eCLIP7.14□□□□□ -1.27
CAST-201ENST00000309190 CLSPNQ9HAW4 1339 aa7.14□□□□□ -1.27
CAST-201ENST00000309190 CEBPAP49715 358 aaPredicted RBP7.13□□□□□ -1.27
CAST-201ENST00000309190 ZBTB22O15209 634 aa7.13□□□□□ -1.27
CAST-201ENST00000309190 PCF11O94913 1555 aaKnown RBP7.12□□□□□ -1.27
CAST-201ENST00000309190 RBM33Q96EV2 1170 aaKnown RBP7.12□□□□□ -1.27
CAST-201ENST00000309190 EFCAB2Q5VUJ9 269 aa7.11□□□□□ -1.27
CAST-201ENST00000309190 ABCA5Q8WWZ7 1642 aa7.11□□□□□ -1.27
CAST-201ENST00000309190 NUTM2FA1L443 756 aa7.11□□□□□ -1.27
CAST-201ENST00000309190 TARBP1Q13395 1621 aaKnown RBP7.11□□□□□ -1.27
CAST-201ENST00000309190 GCC2Q8IWJ2 1684 aa7.11□□□□□ -1.27
CAST-201ENST00000309190 SRCAPQ6ZRS2 3230 aa7.11□□□□□ -1.27
CAST-201ENST00000309190 DENND4BO75064 1496 aaPredicted RBP7.1□□□□□ -1.27
CAST-201ENST00000309190 KIAA0586Q9BVV6 1533 aa7.1□□□□□ -1.27
CAST-201ENST00000309190 DIEXFQ68CQ4 756 aaKnown RBP7.1□□□□□ -1.27
CAST-201ENST00000309190 FMN1Q68DA7 1419 aa7.1□□□□□ -1.27
CAST-201ENST00000309190 CUL7Q14999 1698 aa7.09□□□□□ -1.27
CAST-201ENST00000309190 PKD2Q13563 968 aa7.08□□□□□ -1.28
CAST-201ENST00000309190 ZNF316A6NFI3 1004 aaPredicted RBP7.08□□□□□ -1.28
CAST-201ENST00000309190 SPAG9O60271 1321 aaKnown RBP7.08□□□□□ -1.28
CAST-201ENST00000309190 MAGI1Q96QZ7 1491 aaPredicted RBP7.07□□□□□ -1.28
CAST-201ENST00000309190 STK26Q9P289 416 aa7.07□□□□□ -1.28
CAST-201ENST00000309190 CEP170Q5SW79 1584 aa7.06□□□□□ -1.28
CAST-201ENST00000309190 SCAPERQ9BY12 1400 aa7.06□□□□□ -1.28
CAST-201ENST00000309190 IQGAP2Q13576 1575 aa7.06□□□□□ -1.28
CAST-201ENST00000309190 FKBP8Q14318 412 aa7.06□□□□□ -1.28
CAST-201ENST00000309190 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.06□□□□□ -1.28
CAST-201ENST00000309190 GTF3C3Q9Y5Q9 886 aa7.06□□□□□ -1.28
CAST-201ENST00000309190 HECW1Q76N89 1606 aa7.06□□□□□ -1.28
CAST-201ENST00000309190 UACAQ9BZF9 1416 aa7.05□□□□□ -1.28
CAST-201ENST00000309190 LRRC9Q6ZRR7 1453 aa7.05□□□□□ -1.28
CAST-201ENST00000309190 FBXO31Q5XUX0 539 aaPredicted RBP7.04□□□□□ -1.28
CAST-201ENST00000309190 EFCAB5A4FU69 1503 aa7.04□□□□□ -1.28
CAST-201ENST00000309190 WASHC2CQ9Y4E1 1318 aa7.04□□□□□ -1.28
CAST-201ENST00000309190 NUP155O75694 1391 aa7.04□□□□□ -1.28
CAST-201ENST00000309190 DCAF11Q8TEB1 546 aa7.04□□□□□ -1.28
CAST-201ENST00000309190 DISP1Q96F81 1524 aa7.03□□□□□ -1.28
CAST-201ENST00000309190 ATP10BO94823 1461 aa7.03□□□□□ -1.28
CAST-201ENST00000309190 RAB3GAP2Q9H2M9 1393 aa7.03□□□□□ -1.28
CAST-201ENST00000309190 MIER1Q8N108 512 aa7.03□□□□□ -1.28
CAST-201ENST00000309190 ADAMTS12P58397 1594 aa7.02□□□□□ -1.29
CAST-201ENST00000309190 SOX12O15370 315 aa7.02□□□□□ -1.29
CAST-201ENST00000309190 NCOA2Q15596 1464 aa7.02□□□□□ -1.29
CAST-201ENST00000309190 EPRSP07814 1512 aaKnown RBP7.02□□□□□ -1.29
CAST-201ENST00000309190 CHD1O14646 1710 aa7.02□□□□□ -1.29
CAST-201ENST00000309190 PTPN23Q9H3S7 1636 aa7.02□□□□□ -1.29
CAST-201ENST00000309190 MPHOSPH9Q99550 1183 aa7.01□□□□□ -1.29
CAST-201ENST00000309190 FYCO1Q9BQS8 1478 aa7.01□□□□□ -1.29
CAST-201ENST00000309190 PPP1R15AO75807 674 aaPredicted RBP7.01□□□□□ -1.29
CAST-201ENST00000309190 ASXL2Q76L83 1435 aa7.01□□□□□ -1.29
CAST-201ENST00000309190 HSPA2P54652 639 aa7.01□□□□□ -1.29
CAST-201ENST00000309190 DDX10Q13206 875 aaKnown RBP7.01□□□□□ -1.29
CAST-201ENST00000309190 NUP153P49790 1475 aaKnown RBP7□□□□□ -1.29
CAST-201ENST00000309190 MAGI3Q5TCQ9 1506 aa7□□□□□ -1.29
CAST-201ENST00000309190 PLCB2Q00722 1185 aa7□□□□□ -1.29
CAST-201ENST00000309190 NUP160Q12769 1436 aa7□□□□□ -1.29
CAST-201ENST00000309190 CD109Q6YHK3 1445 aa7□□□□□ -1.29
CAST-201ENST00000309190 PBRM1Q86U86 1689 aa7□□□□□ -1.29
CAST-201ENST00000309190 CASKIN1Q8WXD9 1431 aa6.99□□□□□ -1.29
CAST-201ENST00000309190 C14orf37Q86TY3 774 aa6.99□□□□□ -1.29
CAST-201ENST00000309190 SALL2Q9Y467 1007 aaPredicted RBP6.99□□□□□ -1.29
CAST-201ENST00000309190 KDM6BO15054 1643 aa6.99□□□□□ -1.29
CAST-201ENST00000309190 ZBTB7CA1YPR0 619 aa6.98□□□□□ -1.29
CAST-201ENST00000309190 TMEM132EQ6IEE7 984 aa6.98□□□□□ -1.29
CAST-201ENST00000309190 ARHGAP5Q13017 1502 aa6.98□□□□□ -1.29
CAST-201ENST00000309190 CROCC2H7BZ55 1655 aa6.98□□□□□ -1.29
CAST-201ENST00000309190 PPP6R1Q9UPN7 881 aa6.98□□□□□ -1.29
CAST-201ENST00000309190 TCOF1Q13428 1488 aaKnown RBP6.98□□□□□ -1.29
CAST-201ENST00000309190 CCDC18Q5T9S5 1454 aa6.98□□□□□ -1.29
CAST-201ENST00000309190 TNNT2P45379 298 aaPredicted RBP6.98□□□□□ -1.29
CAST-201ENST00000309190 PTPRKQ15262 1439 aa6.97□□□□□ -1.29
CAST-201ENST00000309190 LMOD2Q6P5Q4 547 aa6.97□□□□□ -1.29
CAST-201ENST00000309190 E9PCH4 1651 aa6.97□□□□□ -1.29
CAST-201ENST00000309190 TONSLQ96HA7 1378 aa6.97□□□□□ -1.29
CAST-201ENST00000309190 FGD6Q6ZV73 1430 aa6.97□□□□□ -1.29
CAST-201ENST00000309190 L3MBTL2Q969R5 705 aa6.97□□□□□ -1.29
CAST-201ENST00000309190 SLC26A8Q96RN1 970 aa6.97□□□□□ -1.29
CAST-201ENST00000309190 UGGT2Q9NYU1 1516 aa6.97□□□□□ -1.29
CAST-201ENST00000309190 KIF15Q9NS87 1388 aa6.96□□□□□ -1.3
CAST-201ENST00000309190 NPM3O75607 178 aaKnown RBP6.96□□□□□ -1.3
CAST-201ENST00000309190 ARXQ96QS3 562 aa6.96□□□□□ -1.3
CAST-201ENST00000309190 TROQ12816 1431 aaPredicted RBP6.95□□□□□ -1.3
CAST-201ENST00000309190 TSPOAP1O95153 1857 aa6.95□□□□□ -1.3
CAST-201ENST00000309190 PODXL2Q9NZ53 605 aa6.95□□□□□ -1.3
CAST-201ENST00000309190 KDM4FA0A1W2PPD8 638 aa6.95□□□□□ -1.3
CAST-201ENST00000309190 TMC1Q8TDI8 760 aa6.95□□□□□ -1.3
CAST-201ENST00000309190 TRAPPC8Q9Y2L5 1435 aa6.94□□□□□ -1.3
CAST-201ENST00000309190 MYOM3Q5VTT5 1437 aa6.94□□□□□ -1.3
CAST-201ENST00000309190 TRAK1Q9UPV9 953 aa6.94□□□□□ -1.3
CAST-201ENST00000309190 CFAP65Q6ZU64 1925 aaKnown RBP6.94□□□□□ -1.3
CAST-201ENST00000309190 ADCY10Q96PN6 1610 aa6.94□□□□□ -1.3
CAST-201ENST00000309190 SETD5Q9C0A6 1442 aa6.93□□□□□ -1.3
CAST-201ENST00000309190 AKNAQ7Z591 1439 aa6.92□□□□□ -1.3
CAST-201ENST00000309190 SUPT6HQ7KZ85 1726 aaKnown RBP6.92□□□□□ -1.3
CAST-201ENST00000309190 KIAA0556O60303 1618 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms