RNA–Protein interactions for RNA: ENST00000302118.5

PCSK9-201, Transcript of proprotein convertase subtilisin/kexin type 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCSK9, Length 3,637 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK9-201ENST00000302118 CUL7Q14999 1698 aa16.64■□□□□ 0.25
PCSK9-201ENST00000302118 HFM1A2PYH4 1435 aa16.64■□□□□ 0.25
PCSK9-201ENST00000302118 HNRNPMP52272 730 aaKnown RBP eCLIP16.63■□□□□ 0.251e-7■■■■□ 20.4
PCSK9-201ENST00000302118 JPH4Q96JJ6 628 aa16.63■□□□□ 0.25
PCSK9-201ENST00000302118 SENP3Q9H4L4 574 aaPredicted RBP16.63■□□□□ 0.25
PCSK9-201ENST00000302118 PRKRIP1Q9H875 184 aaPredicted RBP16.62■□□□□ 0.25
PCSK9-201ENST00000302118 SNAPC4Q5SXM2 1469 aa16.62■□□□□ 0.25
PCSK9-201ENST00000302118 EFCAB5A4FU69 1503 aa16.6■□□□□ 0.25
PCSK9-201ENST00000302118 CFAP43Q8NDM7 1665 aa16.6■□□□□ 0.25
PCSK9-201ENST00000302118 NPM2Q86SE8 214 aaKnown RBP16.57■□□□□ 0.24
PCSK9-201ENST00000302118 ABCA5Q8WWZ7 1642 aa16.57■□□□□ 0.24
PCSK9-201ENST00000302118 KIF7Q2M1P5 1343 aa16.56■□□□□ 0.24
PCSK9-201ENST00000302118 CCDC136Q96JN2 1154 aa16.56■□□□□ 0.24
PCSK9-201ENST00000302118 NUP155O75694 1391 aa16.56■□□□□ 0.24
PCSK9-201ENST00000302118 IFT140Q96RY7 1462 aa16.55■□□□□ 0.24
PCSK9-201ENST00000302118 CTTNBP2Q8WZ74 1663 aa16.54■□□□□ 0.24
PCSK9-201ENST00000302118 TARBP1Q13395 1621 aaKnown RBP16.54■□□□□ 0.24
PCSK9-201ENST00000302118 PRG4Q92954 1404 aaPredicted RBP16.54■□□□□ 0.24
PCSK9-201ENST00000302118 CC2D1BQ5T0F9 858 aaKnown RBP16.53■□□□□ 0.24
PCSK9-201ENST00000302118 NBR1Q14596 966 aa16.52■□□□□ 0.24
PCSK9-201ENST00000302118 ST20-MTHFSA0A0A6YYL1 179 aa16.52■□□□□ 0.24
PCSK9-201ENST00000302118 CCDC7Q96M83 1385 aa16.51■□□□□ 0.23
PCSK9-201ENST00000302118 IQGAP2Q13576 1575 aa16.51■□□□□ 0.23
PCSK9-201ENST00000302118 EPRSP07814 1512 aaKnown RBP16.5■□□□□ 0.23
PCSK9-201ENST00000302118 PPP4R2Q9NY27 417 aa16.5■□□□□ 0.23
PCSK9-201ENST00000302118 PTPN23Q9H3S7 1636 aa16.49■□□□□ 0.23
PCSK9-201ENST00000302118 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.47■□□□□ 0.235e-6■■■□□ 14.8
PCSK9-201ENST00000302118 PLB1Q6P1J6 1458 aa16.45■□□□□ 0.22
PCSK9-201ENST00000302118 GRIN2AQ12879 1464 aa16.45■□□□□ 0.22
PCSK9-201ENST00000302118 MAGI3Q5TCQ9 1506 aa16.44■□□□□ 0.22
PCSK9-201ENST00000302118 USP47Q96K76 1375 aa16.44■□□□□ 0.22
PCSK9-201ENST00000302118 EHBP1L1Q8N3D4 1523 aa16.44■□□□□ 0.22
PCSK9-201ENST00000302118 THOC2Q8NI27 1593 aaKnown RBP16.43■□□□□ 0.22
PCSK9-201ENST00000302118 ADAMTS12P58397 1594 aa16.43■□□□□ 0.22
PCSK9-201ENST00000302118 KIAA0586Q9BVV6 1533 aa16.43■□□□□ 0.22
PCSK9-201ENST00000302118 PBRM1Q86U86 1689 aa16.43■□□□□ 0.22
PCSK9-201ENST00000302118 CHGAP10645 457 aaKnown RBP16.42■□□□□ 0.22
PCSK9-201ENST00000302118 SUPT6HQ7KZ85 1726 aaKnown RBP16.42■□□□□ 0.22
PCSK9-201ENST00000302118 CNTLNQ9NXG0 1405 aa16.42■□□□□ 0.22
PCSK9-201ENST00000302118 CARMIL2Q6F5E8 1435 aa16.41■□□□□ 0.22
PCSK9-201ENST00000302118 DAPK1P53355 1430 aa16.41■□□□□ 0.22
PCSK9-201ENST00000302118 ANKRD30AQ9BXX3 1397 aa16.41■□□□□ 0.22
PCSK9-201ENST00000302118 ABCC5O15440 1437 aa16.4■□□□□ 0.22
PCSK9-201ENST00000302118 ANKRD30BQ9BXX2 1392 aa16.4■□□□□ 0.22
PCSK9-201ENST00000302118 SAMD9Q5K651 1589 aa16.39■□□□□ 0.21
PCSK9-201ENST00000302118 EIF4G3O43432 1585 aaKnown RBP16.38■□□□□ 0.21
PCSK9-201ENST00000302118 LRRIQ1Q96JM4 1722 aa16.38■□□□□ 0.21
PCSK9-201ENST00000302118 NBPF1Q3BBV0 1214 aa16.38■□□□□ 0.21
PCSK9-201ENST00000302118 KDM5BQ9UGL1 1544 aa16.38■□□□□ 0.21
PCSK9-201ENST00000302118 WDR62O43379 1518 aa16.37■□□□□ 0.21
PCSK9-201ENST00000302118 MSH5O43196 834 aa16.37■□□□□ 0.21
PCSK9-201ENST00000302118 ROCK2O75116 1388 aaKnown RBP16.36■□□□□ 0.21
PCSK9-201ENST00000302118 KDM6BO15054 1643 aa16.36■□□□□ 0.21
PCSK9-201ENST00000302118 AKNAQ7Z591 1439 aa16.36■□□□□ 0.21
PCSK9-201ENST00000302118 HECW1Q76N89 1606 aa16.35■□□□□ 0.21
PCSK9-201ENST00000302118 UGGT2Q9NYU1 1516 aa16.35■□□□□ 0.21
PCSK9-201ENST00000302118 PLIN1O60240 522 aa16.34■□□□□ 0.21
PCSK9-201ENST00000302118 DISP1Q96F81 1524 aa16.34■□□□□ 0.21
PCSK9-201ENST00000302118 ZBED9Q6R2W3 1325 aa16.34■□□□□ 0.21
PCSK9-201ENST00000302118 DENND4BO75064 1496 aaPredicted RBP16.34■□□□□ 0.21
PCSK9-201ENST00000302118 ANKRD50Q9ULJ7 1429 aa16.34■□□□□ 0.21
PCSK9-201ENST00000302118 SYNJ2O15056 1496 aa16.34■□□□□ 0.21
PCSK9-201ENST00000302118 PTPRGP23470 1445 aa16.33■□□□□ 0.2
PCSK9-201ENST00000302118 NUP153P49790 1475 aaKnown RBP16.33■□□□□ 0.2
PCSK9-201ENST00000302118 MIA2Q96PC5 1412 aa16.32■□□□□ 0.2
PCSK9-201ENST00000302118 NUDCQ9Y266 331 aa16.32■□□□□ 0.2
PCSK9-201ENST00000302118 ANP32AP39687 249 aaKnown RBP16.31■□□□□ 0.2
PCSK9-201ENST00000302118 TNNT2P45379 298 aaPredicted RBP16.3■□□□□ 0.2
PCSK9-201ENST00000302118 KIF15Q9NS87 1388 aa16.29■□□□□ 0.2
PCSK9-201ENST00000302118 CDCA7LQ96GN5 454 aa16.29■□□□□ 0.2
PCSK9-201ENST00000302118 MAGI1Q96QZ7 1491 aaPredicted RBP16.28■□□□□ 0.2
PCSK9-201ENST00000302118 SKAP1Q86WV1 359 aa16.27■□□□□ 0.2
PCSK9-201ENST00000302118 EXOC6Q8TAG9 804 aa16.27■□□□□ 0.2
PCSK9-201ENST00000302118 TROQ12816 1431 aaPredicted RBP16.27■□□□□ 0.2
PCSK9-201ENST00000302118 NCOA1Q15788 1441 aa16.26■□□□□ 0.19
PCSK9-201ENST00000302118 PANK3Q9H999 370 aa16.26■□□□□ 0.19
PCSK9-201ENST00000302118 KIAA0556O60303 1618 aa16.26■□□□□ 0.19
PCSK9-201ENST00000302118 NEUROD2Q15784 382 aa16.26■□□□□ 0.19
PCSK9-201ENST00000302118 ARHGEF11O15085 1522 aa16.25■□□□□ 0.19
PCSK9-201ENST00000302118 CEP170Q5SW79 1584 aa16.25■□□□□ 0.19
PCSK9-201ENST00000302118 RTL5Q5HYW3 569 aaPredicted RBP16.25■□□□□ 0.19
PCSK9-201ENST00000302118 RPRD2Q5VT52 1461 aaKnown RBP16.24■□□□□ 0.19
PCSK9-201ENST00000302118 WDR43Q15061 677 aaKnown RBP eCLIP16.24■□□□□ 0.19
PCSK9-201ENST00000302118 ANO8Q9HCE9 1232 aaPredicted RBP16.24■□□□□ 0.19
PCSK9-201ENST00000302118 PNISRQ8TF01 805 aaKnown RBP16.24■□□□□ 0.19
PCSK9-201ENST00000302118 KIAA1107Q9UPP5 1409 aa16.23■□□□□ 0.19
PCSK9-201ENST00000302118 RCAN3Q9UKA8 241 aa16.23■□□□□ 0.19
PCSK9-201ENST00000302118 CAMSAP2Q08AD1 1489 aa16.23■□□□□ 0.19
PCSK9-201ENST00000302118 LAS1LQ9Y4W2 734 aaKnown RBP16.23■□□□□ 0.19
PCSK9-201ENST00000302118 ZBTB47Q9UFB7 747 aaPredicted RBP16.22■□□□□ 0.19
PCSK9-201ENST00000302118 KNSTRNQ9Y448 316 aa16.22■□□□□ 0.19
PCSK9-201ENST00000302118 CCDC146Q8IYE0 955 aa16.21■□□□□ 0.19
PCSK9-201ENST00000302118 RAPGEF6Q8TEU7 1601 aa16.2■□□□□ 0.18
PCSK9-201ENST00000302118 C9orf84Q5VXU9 1444 aa16.2■□□□□ 0.18
PCSK9-201ENST00000302118 NUTM2DQ5VT03 806 aaPredicted RBP16.2■□□□□ 0.18
PCSK9-201ENST00000302118 AFAP1Q8N556 730 aa16.2■□□□□ 0.18
PCSK9-201ENST00000302118 RTN4Q9NQC3 1192 aaKnown RBP16.19■□□□□ 0.18
PCSK9-201ENST00000302118 DAXXQ9UER7 740 aaPredicted RBP16.19■□□□□ 0.18
PCSK9-201ENST00000302118 ROCK1Q13464 1354 aa16.19■□□□□ 0.18
PCSK9-201ENST00000302118 GPATCH8Q9UKJ3 1502 aaKnown RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms