RNA–Protein interactions for RNA: ENST00000283629.7

UBP1-202, Transcript of upstream binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBP1, Length 4,148 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-202ENST00000283629 SENP3Q9H4L4 574 aaPredicted RBP24.86■■□□□ 1.57
UBP1-202ENST00000283629 FGD6Q6ZV73 1430 aa24.85■■□□□ 1.57
UBP1-202ENST00000283629 PKD2Q13563 968 aa24.83■■□□□ 1.57
UBP1-202ENST00000283629 PAK3O75914 559 aaPredicted RBP24.83■■□□□ 1.56
UBP1-202ENST00000283629 CCDC18Q5T9S5 1454 aa24.82■■□□□ 1.56
UBP1-202ENST00000283629 BIVM-ERCC5R4GMW8 1640 aa24.82■■□□□ 1.56
UBP1-202ENST00000283629 CARD11Q9BXL7 1154 aa24.8■■□□□ 1.56
UBP1-202ENST00000283629 TIAM1Q13009 1591 aa24.79■■□□□ 1.56
UBP1-202ENST00000283629 CASKIN1Q8WXD9 1431 aa24.78■■□□□ 1.56
UBP1-202ENST00000283629 TRIM44Q96DX7 344 aaPredicted RBP24.77■■□□□ 1.56
UBP1-202ENST00000283629 CHGAP10645 457 aaKnown RBP24.77■■□□□ 1.56
UBP1-202ENST00000283629 JPH4Q96JJ6 628 aa24.76■■□□□ 1.55
UBP1-202ENST00000283629 SLC4A3P48751 1232 aa24.76■■□□□ 1.55
UBP1-202ENST00000283629 DCAF11Q8TEB1 546 aa24.76■■□□□ 1.55
UBP1-202ENST00000283629 HNRNPMP52272 730 aaKnown RBP eCLIP24.74■■□□□ 1.551e-6■■■■□ 26.3
UBP1-202ENST00000283629 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.72■■□□□ 1.55
UBP1-202ENST00000283629 NCOA2Q15596 1464 aa24.72■■□□□ 1.55
UBP1-202ENST00000283629 MYOM3Q5VTT5 1437 aa24.69■■□□□ 1.54
UBP1-202ENST00000283629 BECN1Q14457 450 aa24.68■■□□□ 1.54
UBP1-202ENST00000283629 VSIG10Q8N0Z9 540 aa24.67■■□□□ 1.54
UBP1-202ENST00000283629 PCF11O94913 1555 aaKnown RBP24.67■■□□□ 1.54
UBP1-202ENST00000283629 WDR97A6NE52 1622 aa24.65■■□□□ 1.54
UBP1-202ENST00000283629 SPRYD3Q8NCJ5 442 aa24.64■■□□□ 1.54
UBP1-202ENST00000283629 FYCO1Q9BQS8 1478 aa24.64■■□□□ 1.53
UBP1-202ENST00000283629 DNMBPQ6XZF7 1577 aa24.64■■□□□ 1.53
UBP1-202ENST00000283629 NUP155O75694 1391 aa24.63■■□□□ 1.53
UBP1-202ENST00000283629 GZF1Q9H116 711 aaPredicted RBP24.63■■□□□ 1.53
UBP1-202ENST00000283629 ABCA10Q8WWZ4 1543 aa24.63■■□□□ 1.53
UBP1-202ENST00000283629 SLKQ9H2G2 1235 aaPredicted RBP24.62■■□□□ 1.53
UBP1-202ENST00000283629 BRPF3Q9ULD4 1205 aa24.62■■□□□ 1.53
UBP1-202ENST00000283629 WDR43Q15061 677 aaKnown RBP eCLIP24.6■■□□□ 1.53
UBP1-202ENST00000283629 URB2Q14146 1524 aaKnown RBP24.59■■□□□ 1.53
UBP1-202ENST00000283629 GSE1Q14687 1217 aa24.59■■□□□ 1.53
UBP1-202ENST00000283629 ARID3AQ99856 593 aa24.59■■□□□ 1.53
UBP1-202ENST00000283629 PNNQ9H307 717 aaKnown RBP24.58■■□□□ 1.53
UBP1-202ENST00000283629 UACAQ9BZF9 1416 aa24.58■■□□□ 1.52
UBP1-202ENST00000283629 TCERG1O14776 1098 aaKnown RBP24.56■■□□□ 1.52
UBP1-202ENST00000283629 CC2D1BQ5T0F9 858 aaKnown RBP24.54■■□□□ 1.52
UBP1-202ENST00000283629 CARMIL2Q6F5E8 1435 aa24.54■■□□□ 1.52
UBP1-202ENST00000283629 PDE4AP27815 886 aa24.54■■□□□ 1.52
UBP1-202ENST00000283629 WASHC2AQ641Q2 1341 aa24.52■■□□□ 1.52
UBP1-202ENST00000283629 NUDCQ9Y266 331 aa24.51■■□□□ 1.51
UBP1-202ENST00000283629 USP35Q9P2H5 1018 aa24.5■■□□□ 1.51
UBP1-202ENST00000283629 CDK13Q14004 1512 aaKnown RBP24.5■■□□□ 1.51
UBP1-202ENST00000283629 RCAN3Q9UKA8 241 aa24.49■■□□□ 1.51
UBP1-202ENST00000283629 NBPF8Q3BBV2 869 aa24.47■■□□□ 1.51
UBP1-202ENST00000283629 NCLP19338 710 aaKnown RBP24.47■■□□□ 1.51
UBP1-202ENST00000283629 ANKRD30AQ9BXX3 1397 aa24.47■■□□□ 1.51
UBP1-202ENST00000283629 NAIPQ13075 1403 aa24.46■■□□□ 1.51
UBP1-202ENST00000283629 EFCAB5A4FU69 1503 aa24.46■■□□□ 1.51
UBP1-202ENST00000283629 PTPRKQ15262 1439 aa24.46■■□□□ 1.51
UBP1-202ENST00000283629 PRDM2Q13029 1718 aa24.46■■□□□ 1.51
UBP1-202ENST00000283629 CCDC184Q52MB2 194 aa24.46■■□□□ 1.51
UBP1-202ENST00000283629 PRKRIP1Q9H875 184 aaPredicted RBP24.44■■□□□ 1.5
UBP1-202ENST00000283629 EXOC6Q8TAG9 804 aa24.44■■□□□ 1.5
UBP1-202ENST00000283629 HFM1A2PYH4 1435 aa24.44■■□□□ 1.5
UBP1-202ENST00000283629 RSPH6AQ9H0K4 717 aa24.43■■□□□ 1.5
UBP1-202ENST00000283629 ST20-MTHFSA0A0A6YYL1 179 aa24.43■■□□□ 1.5
UBP1-202ENST00000283629 GRIN2BQ13224 1484 aa24.43■■□□□ 1.5
UBP1-202ENST00000283629 PRG4Q92954 1404 aaPredicted RBP24.43■■□□□ 1.5
UBP1-202ENST00000283629 HSP90AA2PQ14568 343 aaPredicted RBP24.43■■□□□ 1.5
UBP1-202ENST00000283629 NPM1P06748 294 aaKnown RBP eCLIP24.42■■□□□ 1.5
UBP1-202ENST00000283629 MAPKBP1O60336 1514 aa24.41■■□□□ 1.5
UBP1-202ENST00000283629 L1TD1Q5T7N2 865 aaKnown RBP24.41■■□□□ 1.5
UBP1-202ENST00000283629 PLIN1O60240 522 aa24.39■■□□□ 1.5
UBP1-202ENST00000283629 ZNF608Q9ULD9 1512 aaPredicted RBP24.38■■□□□ 1.49
UBP1-202ENST00000283629 FRAT1Q92837 279 aaPredicted RBP24.37■■□□□ 1.49
UBP1-202ENST00000283629 NEUROD2Q15784 382 aa24.37■■□□□ 1.49
UBP1-202ENST00000283629 C11orf95C9JLR9 678 aaPredicted RBP24.37■■□□□ 1.49
UBP1-202ENST00000283629 ZBTB7CA1YPR0 619 aa24.36■■□□□ 1.49
UBP1-202ENST00000283629 KIF7Q2M1P5 1343 aa24.35■■□□□ 1.49
UBP1-202ENST00000283629 AMER1Q5JTC6 1135 aaPredicted RBP24.34■■□□□ 1.49
UBP1-202ENST00000283629 NFKBIBQ15653 356 aa24.33■■□□□ 1.49
UBP1-202ENST00000283629 ZBED9Q6R2W3 1325 aa24.33■■□□□ 1.49
UBP1-202ENST00000283629 DNTTIP2Q5QJE6 756 aaKnown RBP24.33■■□□□ 1.49
UBP1-202ENST00000283629 TPRNQ4KMQ1 711 aa24.33■■□□□ 1.48
UBP1-202ENST00000283629 EPRSP07814 1512 aaKnown RBP24.33■■□□□ 1.48
UBP1-202ENST00000283629 SNAPC4Q5SXM2 1469 aa24.32■■□□□ 1.48
UBP1-202ENST00000283629 ROCK2O75116 1388 aaKnown RBP24.32■■□□□ 1.48
UBP1-202ENST00000283629 PTPRGP23470 1445 aa24.32■■□□□ 1.48
UBP1-202ENST00000283629 PKNOX2Q96KN3 472 aa24.32■■□□□ 1.48
UBP1-202ENST00000283629 MRC2Q9UBG0 1479 aa24.32■■□□□ 1.48
UBP1-202ENST00000283629 MAP3K1Q13233 1512 aa24.31■■□□□ 1.48
UBP1-202ENST00000283629 LAMC3Q9Y6N6 1575 aa24.3■■□□□ 1.48
UBP1-202ENST00000283629 TNNT2P45379 298 aaPredicted RBP24.29■■□□□ 1.48
UBP1-202ENST00000283629 USP47Q96K76 1375 aa24.28■■□□□ 1.48
UBP1-202ENST00000283629 CCDC7Q96M83 1385 aa24.28■■□□□ 1.48
UBP1-202ENST00000283629 KNSTRNQ9Y448 316 aa24.27■■□□□ 1.48
UBP1-202ENST00000283629 EHBP1L1Q8N3D4 1523 aa24.27■■□□□ 1.48
UBP1-202ENST00000283629 PTMAP06454 111 aaKnown RBP24.26■■□□□ 1.47
UBP1-202ENST00000283629 PLPPR3Q6T4P5 718 aa24.26■■□□□ 1.47
UBP1-202ENST00000283629 GOLGA6L22H0YM25 854 aa24.25■■□□□ 1.47
UBP1-202ENST00000283629 GOLGA6L3A6NEY3 463 aa24.25■■□□□ 1.47
UBP1-202ENST00000283629 CUL7Q14999 1698 aa24.24■■□□□ 1.47
UBP1-202ENST00000283629 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.24■■□□□ 1.475e-10■■■■□ 19.8
UBP1-202ENST00000283629 PLB1Q6P1J6 1458 aa24.23■■□□□ 1.47
UBP1-202ENST00000283629 ANKRD50Q9ULJ7 1429 aa24.21■■□□□ 1.47
UBP1-202ENST00000283629 SUPT6HQ7KZ85 1726 aaKnown RBP24.2■■□□□ 1.47
UBP1-202ENST00000283629 EFCAB2Q5VUJ9 269 aa24.2■■□□□ 1.46
UBP1-202ENST00000283629 IQGAP2Q13576 1575 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms