RNA–Protein interactions for RNA: ENST00000276431.8

TNFRSF10B-201, Transcript of TNF receptor superfamily member 10b, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TNFRSF10B, Length 4,146 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF10B-201ENST00000276431 TOPBP1Q92547 1522 aa15.34■□□□□ 0.05
TNFRSF10B-201ENST00000276431 POLA1P09884 1462 aaPredicted RBP15.34■□□□□ 0.05
TNFRSF10B-201ENST00000276431 PDE4AP27815 886 aa15.33■□□□□ 0.04
TNFRSF10B-201ENST00000276431 ARXQ96QS3 562 aa15.33■□□□□ 0.04
TNFRSF10B-201ENST00000276431 DNMBPQ6XZF7 1577 aa15.31■□□□□ 0.04
TNFRSF10B-201ENST00000276431 NAIPQ13075 1403 aa15.3■□□□□ 0.04
TNFRSF10B-201ENST00000276431 BRPF3Q9ULD4 1205 aa15.3■□□□□ 0.04
TNFRSF10B-201ENST00000276431 GAPVD1Q14C86 1478 aa15.29■□□□□ 0.04
TNFRSF10B-201ENST00000276431 RCAN3Q9UKA8 241 aa15.29■□□□□ 0.04
TNFRSF10B-201ENST00000276431 CASKIN1Q8WXD9 1431 aa15.29■□□□□ 0.04
TNFRSF10B-201ENST00000276431 PCF11O94913 1555 aaKnown RBP15.28■□□□□ 0.04
TNFRSF10B-201ENST00000276431 HFM1A2PYH4 1435 aa15.28■□□□□ 0.04
TNFRSF10B-201ENST00000276431 ABCA10Q8WWZ4 1543 aa15.28■□□□□ 0.04
TNFRSF10B-201ENST00000276431 CARD11Q9BXL7 1154 aa15.27■□□□□ 0.04
TNFRSF10B-201ENST00000276431 CHMP7Q8WUX9 453 aaPredicted RBP15.26■□□□□ 0.03
TNFRSF10B-201ENST00000276431 FYCO1Q9BQS8 1478 aa15.26■□□□□ 0.03
TNFRSF10B-201ENST00000276431 PPM1GO15355 546 aaPredicted RBP15.26■□□□□ 0.03
TNFRSF10B-201ENST00000276431 RRP1P56182 461 aaKnown RBP15.25■□□□□ 0.03
TNFRSF10B-201ENST00000276431 MAP3K1Q13233 1512 aa15.25■□□□□ 0.03
TNFRSF10B-201ENST00000276431 RGS3P49796 1198 aa15.24■□□□□ 0.03
TNFRSF10B-201ENST00000276431 EFCAB5A4FU69 1503 aa15.24■□□□□ 0.03
TNFRSF10B-201ENST00000276431 TCERG1O14776 1098 aaKnown RBP15.24■□□□□ 0.03
TNFRSF10B-201ENST00000276431 CC2D1BQ5T0F9 858 aaKnown RBP15.23■□□□□ 0.03
TNFRSF10B-201ENST00000276431 CDCA7LQ96GN5 454 aa15.23■□□□□ 0.03
TNFRSF10B-201ENST00000276431 ZNF644Q9H582 1327 aaPredicted RBP15.23■□□□□ 0.03
TNFRSF10B-201ENST00000276431 NCOA2Q15596 1464 aa15.22■□□□□ 0.03
TNFRSF10B-201ENST00000276431 MYOM3Q5VTT5 1437 aa15.21■□□□□ 0.03
TNFRSF10B-201ENST00000276431 PNISRQ8TF01 805 aaKnown RBP15.21■□□□□ 0.02
TNFRSF10B-201ENST00000276431 RGL3Q3MIN7 710 aa15.2■□□□□ 0.02
TNFRSF10B-201ENST00000276431 SMG6Q86US8 1419 aaKnown RBP15.2■□□□□ 0.02
TNFRSF10B-201ENST00000276431 PKD2Q13563 968 aa15.19■□□□□ 0.02
TNFRSF10B-201ENST00000276431 ST20-MTHFSA0A0A6YYL1 179 aa15.18■□□□□ 0.02
TNFRSF10B-201ENST00000276431 NCOA1Q15788 1441 aa15.18■□□□□ 0.02
TNFRSF10B-201ENST00000276431 CRBNQ96SW2 442 aa15.17■□□□□ 0.02
TNFRSF10B-201ENST00000276431 USP47Q96K76 1375 aa15.17■□□□□ 0.02
TNFRSF10B-201ENST00000276431 BACH2Q9BYV9 841 aa15.17■□□□□ 0.02
TNFRSF10B-201ENST00000276431 DCAF11Q8TEB1 546 aa15.16■□□□□ 0.02
TNFRSF10B-201ENST00000276431 GSE1Q14687 1217 aa15.16■□□□□ 0.02
TNFRSF10B-201ENST00000276431 DDRGK1Q96HY6 314 aa15.16■□□□□ 0.02
TNFRSF10B-201ENST00000276431 PRDM2Q13029 1718 aa15.15■□□□□ 0.02
TNFRSF10B-201ENST00000276431 PTPN23Q9H3S7 1636 aa15.15■□□□□ 0.02
TNFRSF10B-201ENST00000276431 NFKBIBQ15653 356 aa15.15■□□□□ 0.02
TNFRSF10B-201ENST00000276431 CFDP1Q9UEE9 299 aaPredicted RBP15.15■□□□□ 0.02
TNFRSF10B-201ENST00000276431 LAMC3Q9Y6N6 1575 aa15.15■□□□□ 0.02
TNFRSF10B-201ENST00000276431 CUL7Q14999 1698 aa15.15■□□□□ 0.02
TNFRSF10B-201ENST00000276431 DNAJC5BQ9UF47 199 aa15.15■□□□□ 0.02
TNFRSF10B-201ENST00000276431 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.14■□□□□ 0.01
TNFRSF10B-201ENST00000276431 FRAT1Q92837 279 aaPredicted RBP15.14■□□□□ 0.01
TNFRSF10B-201ENST00000276431 URB2Q14146 1524 aaKnown RBP15.13■□□□□ 0.01
TNFRSF10B-201ENST00000276431 ERCC6Q03468 1493 aa15.13■□□□□ 0.01
TNFRSF10B-201ENST00000276431 USP35Q9P2H5 1018 aa15.12■□□□□ 0.01
TNFRSF10B-201ENST00000276431 PLEKHD1A6NEE1 506 aa15.1■□□□□ 0.01
TNFRSF10B-201ENST00000276431 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.09■□□□□ 0.011e-7■■■■□ 24.6
TNFRSF10B-201ENST00000276431 FRAT2O75474 233 aaPredicted RBP15.08■□□□□ 0
TNFRSF10B-201ENST00000276431 TSPY4P0CV99 314 aa15.08■□□□□ 0
TNFRSF10B-201ENST00000276431 TSPY10P0CW01 314 aa15.08■□□□□ 0
TNFRSF10B-201ENST00000276431 C20orf194Q5TEA3 1177 aa15.08■□□□□ 0
TNFRSF10B-201ENST00000276431 MYBBP1AQ9BQG0 1328 aaKnown RBP15.08■□□□□ 0
TNFRSF10B-201ENST00000276431 SLKQ9H2G2 1235 aaPredicted RBP15.07■□□□□ 0
TNFRSF10B-201ENST00000276431 ANKRD30BQ9BXX2 1392 aa15.06■□□□□ 0
TNFRSF10B-201ENST00000276431 CANXP27824 592 aaKnown RBP15.05■□□□□ 0
TNFRSF10B-201ENST00000276431 SPRYD3Q8NCJ5 442 aa15.05■□□□□ -0
TNFRSF10B-201ENST00000276431 MS4A1P11836 297 aa15.05■□□□□ -0
TNFRSF10B-201ENST00000276431 NLRP13Q86W25 1043 aa15.05■□□□□ -0
TNFRSF10B-201ENST00000276431 RALBP1Q15311 655 aa15.04■□□□□ -0
TNFRSF10B-201ENST00000276431 KIF15Q9NS87 1388 aa15.04■□□□□ -0
TNFRSF10B-201ENST00000276431 WDR43Q15061 677 aaKnown RBP eCLIP15.03■□□□□ -0
TNFRSF10B-201ENST00000276431 GRIN2BQ13224 1484 aa15.03■□□□□ -0
TNFRSF10B-201ENST00000276431 EHBP1L1Q8N3D4 1523 aa15.03■□□□□ -0
TNFRSF10B-201ENST00000276431 RNF123Q5XPI4 1314 aa15.03■□□□□ -0
TNFRSF10B-201ENST00000276431 DHX29Q7Z478 1369 aaKnown RBP15.02■□□□□ -0
TNFRSF10B-201ENST00000276431 KTN1Q86UP2 1357 aaKnown RBP15.01□□□□□ -0.01
TNFRSF10B-201ENST00000276431 KDM5BQ9UGL1 1544 aa15□□□□□ -0.01
TNFRSF10B-201ENST00000276431 CFAP43Q8NDM7 1665 aa15□□□□□ -0.01
TNFRSF10B-201ENST00000276431 MRC2Q9UBG0 1479 aa15□□□□□ -0.01
TNFRSF10B-201ENST00000276431 NUP155O75694 1391 aa14.99□□□□□ -0.01
TNFRSF10B-201ENST00000276431 CARMIL2Q6F5E8 1435 aa14.99□□□□□ -0.01
TNFRSF10B-201ENST00000276431 SUPT6HQ7KZ85 1726 aaKnown RBP14.99□□□□□ -0.01
TNFRSF10B-201ENST00000276431 GZF1Q9H116 711 aaPredicted RBP14.98□□□□□ -0.01
TNFRSF10B-201ENST00000276431 CCDC146Q8IYE0 955 aa14.98□□□□□ -0.01
TNFRSF10B-201ENST00000276431 ROCK2O75116 1388 aaKnown RBP14.98□□□□□ -0.01
TNFRSF10B-201ENST00000276431 CTTNBP2Q8WZ74 1663 aa14.98□□□□□ -0.01
TNFRSF10B-201ENST00000276431 PDE3BQ13370 1112 aa14.97□□□□□ -0.01
TNFRSF10B-201ENST00000276431 PANK3Q9H999 370 aa14.97□□□□□ -0.01
TNFRSF10B-201ENST00000276431 NEUROD2Q15784 382 aa14.97□□□□□ -0.01
TNFRSF10B-201ENST00000276431 FAM161AQ3B820 660 aa14.97□□□□□ -0.01
TNFRSF10B-201ENST00000276431 RPRD2Q5VT52 1461 aaKnown RBP14.96□□□□□ -0.01
TNFRSF10B-201ENST00000276431 KDM6BO15054 1643 aa14.96□□□□□ -0.01
TNFRSF10B-201ENST00000276431 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.96□□□□□ -0.01
TNFRSF10B-201ENST00000276431 JPH4Q96JJ6 628 aa14.96□□□□□ -0.01
TNFRSF10B-201ENST00000276431 DENND4BO75064 1496 aaPredicted RBP14.95□□□□□ -0.02
TNFRSF10B-201ENST00000276431 SNAPC4Q5SXM2 1469 aa14.95□□□□□ -0.02
TNFRSF10B-201ENST00000276431 NBPF1Q3BBV0 1214 aa14.95□□□□□ -0.02
TNFRSF10B-201ENST00000276431 HECW1Q76N89 1606 aa14.95□□□□□ -0.02
TNFRSF10B-201ENST00000276431 ADAMTS8Q9UP79 889 aa14.94□□□□□ -0.02
TNFRSF10B-201ENST00000276431 BRD4O60885 1362 aaPredicted RBP14.94□□□□□ -0.02
TNFRSF10B-201ENST00000276431 IQGAP2Q13576 1575 aa14.94□□□□□ -0.02
TNFRSF10B-201ENST00000276431 ARID4BQ4LE39 1312 aaPredicted RBP14.94□□□□□ -0.02
TNFRSF10B-201ENST00000276431 EPRSP07814 1512 aaKnown RBP14.94□□□□□ -0.02
TNFRSF10B-201ENST00000276431 CDK13Q14004 1512 aaKnown RBP14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms