RNA–Protein interactions for RNA: ENST00000243052.7

PDE1B-201, Transcript of phosphodiesterase 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE1B, Length 3,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-201ENST00000243052 TOPBP1Q92547 1522 aa21.53■■□□□ 1.04
PDE1B-201ENST00000243052 USP35Q9P2H5 1018 aa21.52■■□□□ 1.04
PDE1B-201ENST00000243052 HFM1A2PYH4 1435 aa21.52■■□□□ 1.04
PDE1B-201ENST00000243052 C11orf95C9JLR9 678 aaPredicted RBP21.52■■□□□ 1.04
PDE1B-201ENST00000243052 PDE4AP27815 886 aa21.52■■□□□ 1.04
PDE1B-201ENST00000243052 VSIG10Q8N0Z9 540 aa21.52■■□□□ 1.04
PDE1B-201ENST00000243052 MYOM3Q5VTT5 1437 aa21.51■■□□□ 1.03
PDE1B-201ENST00000243052 SKAP1Q86WV1 359 aa21.51■■□□□ 1.03
PDE1B-201ENST00000243052 PRKRIP1Q9H875 184 aaPredicted RBP21.51■■□□□ 1.03
PDE1B-201ENST00000243052 CC2D2AQ9P2K1 1620 aa21.47■■□□□ 1.03
PDE1B-201ENST00000243052 CFAP43Q8NDM7 1665 aa21.46■■□□□ 1.03
PDE1B-201ENST00000243052 NFKBIBQ15653 356 aa21.46■■□□□ 1.03
PDE1B-201ENST00000243052 ZNF644Q9H582 1327 aaPredicted RBP21.46■■□□□ 1.03
PDE1B-201ENST00000243052 ABCA10Q8WWZ4 1543 aa21.45■■□□□ 1.02
PDE1B-201ENST00000243052 GLIPR1L2Q4G1C9 344 aa21.44■■□□□ 1.02
PDE1B-201ENST00000243052 NUDCQ9Y266 331 aa21.44■■□□□ 1.02
PDE1B-201ENST00000243052 WASHC2CQ9Y4E1 1318 aa21.43■■□□□ 1.02
PDE1B-201ENST00000243052 EFCAB5A4FU69 1503 aa21.43■■□□□ 1.02
PDE1B-201ENST00000243052 EXOC6Q8TAG9 804 aa21.43■■□□□ 1.02
PDE1B-201ENST00000243052 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.43■■□□□ 1.02
PDE1B-201ENST00000243052 FBLN2P98095 1184 aa21.42■■□□□ 1.02
PDE1B-201ENST00000243052 NBPF8Q3BBV2 869 aa21.42■■□□□ 1.02
PDE1B-201ENST00000243052 PTPN23Q9H3S7 1636 aa21.41■■□□□ 1.02
PDE1B-201ENST00000243052 RSPH6AQ9H0K4 717 aa21.41■■□□□ 1.02
PDE1B-201ENST00000243052 GAPVD1Q14C86 1478 aa21.41■■□□□ 1.02
PDE1B-201ENST00000243052 DNMBPQ6XZF7 1577 aa21.41■■□□□ 1.02
PDE1B-201ENST00000243052 KDM2AQ9Y2K7 1162 aa21.38■■□□□ 1.01
PDE1B-201ENST00000243052 SNAPC4Q5SXM2 1469 aa21.38■■□□□ 1.01
PDE1B-201ENST00000243052 TCERG1O14776 1098 aaKnown RBP21.36■■□□□ 1.01
PDE1B-201ENST00000243052 NAP1L5Q96NT1 182 aaPredicted RBP21.35■■□□□ 1.01
PDE1B-201ENST00000243052 ARID4BQ4LE39 1312 aaPredicted RBP21.35■■□□□ 1.01
PDE1B-201ENST00000243052 CCDC7Q96M83 1385 aa21.33■■□□□ 1.01
PDE1B-201ENST00000243052 BACH2Q9BYV9 841 aa21.33■■□□□ 1
PDE1B-201ENST00000243052 FRAT2O75474 233 aaPredicted RBP21.32■■□□□ 1
PDE1B-201ENST00000243052 DDRGK1Q96HY6 314 aa21.32■■□□□ 1
PDE1B-201ENST00000243052 ZMYND15Q9H091 742 aa21.32■■□□□ 1
PDE1B-201ENST00000243052 KIF7Q2M1P5 1343 aa21.32■■□□□ 1
PDE1B-201ENST00000243052 URB2Q14146 1524 aaKnown RBP21.31■■□□□ 1
PDE1B-201ENST00000243052 TMC1Q8TDI8 760 aa21.31■■□□□ 1
PDE1B-201ENST00000243052 CNTLNQ9NXG0 1405 aa21.3■■□□□ 1
PDE1B-201ENST00000243052 CDK13Q14004 1512 aaKnown RBP21.3■■□□□ 1
PDE1B-201ENST00000243052 CFDP1Q9UEE9 299 aaPredicted RBP21.28■■□□□ 1
PDE1B-201ENST00000243052 PRDM2Q13029 1718 aa21.28■■□□□ 1
PDE1B-201ENST00000243052 DCAF11Q8TEB1 546 aa21.27■■□□□ 1
PDE1B-201ENST00000243052 PLIN1O60240 522 aa21.27■■□□□ 1
PDE1B-201ENST00000243052 GRIN2BQ13224 1484 aa21.26■□□□□ 0.99
PDE1B-201ENST00000243052 SUPT6HQ7KZ85 1726 aaKnown RBP21.25■□□□□ 0.99
PDE1B-201ENST00000243052 PKD2Q13563 968 aa21.24■□□□□ 0.99
PDE1B-201ENST00000243052 CUL7Q14999 1698 aa21.24■□□□□ 0.99
PDE1B-201ENST00000243052 EHBP1L1Q8N3D4 1523 aa21.24■□□□□ 0.99
PDE1B-201ENST00000243052 MAGI3Q5TCQ9 1506 aa21.23■□□□□ 0.99
PDE1B-201ENST00000243052 CTTNBP2Q8WZ74 1663 aa21.23■□□□□ 0.99
PDE1B-201ENST00000243052 FAM43AQ8N2R8 423 aa21.22■□□□□ 0.99
PDE1B-201ENST00000243052 PDS5BQ9NTI5 1447 aa21.22■□□□□ 0.99
PDE1B-201ENST00000243052 SMG6Q86US8 1419 aaKnown RBP21.21■□□□□ 0.99
PDE1B-201ENST00000243052 RRP1P56182 461 aaKnown RBP21.2■□□□□ 0.98
PDE1B-201ENST00000243052 KDM6BO15054 1643 aa21.2■□□□□ 0.98
PDE1B-201ENST00000243052 CARD11Q9BXL7 1154 aa21.19■□□□□ 0.98
PDE1B-201ENST00000243052 HSP90AA2PQ14568 343 aaPredicted RBP21.18■□□□□ 0.98
PDE1B-201ENST00000243052 RCAN3Q9UKA8 241 aa21.18■□□□□ 0.98
PDE1B-201ENST00000243052 PLEKHG5O94827 1062 aa21.17■□□□□ 0.98
PDE1B-201ENST00000243052 EPRSP07814 1512 aaKnown RBP21.17■□□□□ 0.98
PDE1B-201ENST00000243052 RGS3P49796 1198 aa21.17■□□□□ 0.98
PDE1B-201ENST00000243052 UGGT2Q9NYU1 1516 aa21.17■□□□□ 0.98
PDE1B-201ENST00000243052 DENND4BO75064 1496 aaPredicted RBP21.14■□□□□ 0.97
PDE1B-201ENST00000243052 RGL3Q3MIN7 710 aa21.14■□□□□ 0.97
PDE1B-201ENST00000243052 ANKRD30BQ9BXX2 1392 aa21.14■□□□□ 0.97
PDE1B-201ENST00000243052 KDM5BQ9UGL1 1544 aa21.14■□□□□ 0.97
PDE1B-201ENST00000243052 NCOA1Q15788 1441 aa21.13■□□□□ 0.97
PDE1B-201ENST00000243052 RRAGDQ9NQL2 400 aaPredicted RBP21.13■□□□□ 0.97
PDE1B-201ENST00000243052 PODXL2Q9NZ53 605 aa21.13■□□□□ 0.97
PDE1B-201ENST00000243052 SLKQ9H2G2 1235 aaPredicted RBP21.12■□□□□ 0.97
PDE1B-201ENST00000243052 POGKQ9P215 609 aa21.12■□□□□ 0.97
PDE1B-201ENST00000243052 HSP90AA1P07900 732 aaKnown RBP21.11■□□□□ 0.97
PDE1B-201ENST00000243052 CHMP7Q8WUX9 453 aaPredicted RBP21.11■□□□□ 0.97
PDE1B-201ENST00000243052 USP47Q96K76 1375 aa21.11■□□□□ 0.97
PDE1B-201ENST00000243052 PNNQ9H307 717 aaKnown RBP21.11■□□□□ 0.97
PDE1B-201ENST00000243052 THOC2Q8NI27 1593 aaKnown RBP21.1■□□□□ 0.97
PDE1B-201ENST00000243052 MS4A1P11836 297 aa21.1■□□□□ 0.97
PDE1B-201ENST00000243052 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.1■□□□□ 0.97
PDE1B-201ENST00000243052 DAPK1P53355 1430 aa21.09■□□□□ 0.97
PDE1B-201ENST00000243052 GZF1Q9H116 711 aaPredicted RBP21.09■□□□□ 0.97
PDE1B-201ENST00000243052 LRRIQ1Q96JM4 1722 aa21.08■□□□□ 0.97
PDE1B-201ENST00000243052 ST20-MTHFSA0A0A6YYL1 179 aa21.07■□□□□ 0.96
PDE1B-201ENST00000243052 ABCC5O15440 1437 aa21.07■□□□□ 0.96
PDE1B-201ENST00000243052 SAMD9Q5K651 1589 aa21.07■□□□□ 0.96
PDE1B-201ENST00000243052 CRBNQ96SW2 442 aa21.07■□□□□ 0.96
PDE1B-201ENST00000243052 PRG4Q92954 1404 aaPredicted RBP21.05■□□□□ 0.96
PDE1B-201ENST00000243052 CDCA7LQ96GN5 454 aa21.05■□□□□ 0.96
PDE1B-201ENST00000243052 MIA2Q96PC5 1412 aa21.05■□□□□ 0.96
PDE1B-201ENST00000243052 RNF123Q5XPI4 1314 aa21.05■□□□□ 0.96
PDE1B-201ENST00000243052 NUP155O75694 1391 aa21.04■□□□□ 0.96
PDE1B-201ENST00000243052 TSPY4P0CV99 314 aa21.04■□□□□ 0.96
PDE1B-201ENST00000243052 TSPY10P0CW01 314 aa21.04■□□□□ 0.96
PDE1B-201ENST00000243052 HECW1Q76N89 1606 aa21.04■□□□□ 0.96
PDE1B-201ENST00000243052 LAMC3Q9Y6N6 1575 aa21.03■□□□□ 0.96
PDE1B-201ENST00000243052 RPRD2Q5VT52 1461 aaKnown RBP21.03■□□□□ 0.96
PDE1B-201ENST00000243052 SPRYD3Q8NCJ5 442 aa21.02■□□□□ 0.96
PDE1B-201ENST00000243052 A0A0U1RQG5 324 aaPredicted RBP21.01■□□□□ 0.95
PDE1B-201ENST00000243052 TCOF1Q13428 1488 aaKnown RBP21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms