RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.94■□□□□ 0.62
PCDHB3-201ENST00000231130 HMGXB3Q12766 1538 aa18.9■□□□□ 0.62
PCDHB3-201ENST00000231130 SKAP1Q86WV1 359 aa18.89■□□□□ 0.61
PCDHB3-201ENST00000231130 KDM5BQ9UGL1 1544 aa18.89■□□□□ 0.61
PCDHB3-201ENST00000231130 KDM2AQ9Y2K7 1162 aa18.89■□□□□ 0.61
PCDHB3-201ENST00000231130 EXOC6Q8TAG9 804 aa18.89■□□□□ 0.61
PCDHB3-201ENST00000231130 ZNF777Q9ULD5 760 aaPredicted RBP18.88■□□□□ 0.61
PCDHB3-201ENST00000231130 ZNF644Q9H582 1327 aaPredicted RBP18.87■□□□□ 0.61
PCDHB3-201ENST00000231130 NCOA1Q15788 1441 aa18.87■□□□□ 0.61
PCDHB3-201ENST00000231130 DAXXQ9UER7 740 aaPredicted RBP18.83■□□□□ 0.6
PCDHB3-201ENST00000231130 FANCD2Q9BXW9 1451 aa18.83■□□□□ 0.6
PCDHB3-201ENST00000231130 VSIG10Q8N0Z9 540 aa18.82■□□□□ 0.6
PCDHB3-201ENST00000231130 PLIN1O60240 522 aa18.81■□□□□ 0.6
PCDHB3-201ENST00000231130 GLIPR1L2Q4G1C9 344 aa18.81■□□□□ 0.6
PCDHB3-201ENST00000231130 DENND4BO75064 1496 aaPredicted RBP18.8■□□□□ 0.6
PCDHB3-201ENST00000231130 KDM6BO15054 1643 aa18.8■□□□□ 0.6
PCDHB3-201ENST00000231130 PPM1GO15355 546 aaPredicted RBP18.79■□□□□ 0.6
PCDHB3-201ENST00000231130 SMG6Q86US8 1419 aaKnown RBP18.79■□□□□ 0.6
PCDHB3-201ENST00000231130 SLC4A3P48751 1232 aa18.79■□□□□ 0.6
PCDHB3-201ENST00000231130 SNAPC4Q5SXM2 1469 aa18.79■□□□□ 0.6
PCDHB3-201ENST00000231130 PDE4AP27815 886 aa18.78■□□□□ 0.6
PCDHB3-201ENST00000231130 GSE1Q14687 1217 aa18.78■□□□□ 0.6
PCDHB3-201ENST00000231130 PNISRQ8TF01 805 aaKnown RBP18.77■□□□□ 0.6
PCDHB3-201ENST00000231130 EFCAB5A4FU69 1503 aa18.77■□□□□ 0.6
PCDHB3-201ENST00000231130 POLA1P09884 1462 aaPredicted RBP18.77■□□□□ 0.6
PCDHB3-201ENST00000231130 CARD11Q9BXL7 1154 aa18.76■□□□□ 0.59
PCDHB3-201ENST00000231130 USP35Q9P2H5 1018 aa18.76■□□□□ 0.59
PCDHB3-201ENST00000231130 USP47Q96K76 1375 aa18.74■□□□□ 0.59
PCDHB3-201ENST00000231130 RCAN3Q9UKA8 241 aa18.74■□□□□ 0.59
PCDHB3-201ENST00000231130 RRP1P56182 461 aaKnown RBP18.74■□□□□ 0.59
PCDHB3-201ENST00000231130 NESP48681 1621 aa18.74■□□□□ 0.59
PCDHB3-201ENST00000231130 ANKRD30BQ9BXX2 1392 aa18.73■□□□□ 0.59
PCDHB3-201ENST00000231130 CDCA7LQ96GN5 454 aa18.73■□□□□ 0.59
PCDHB3-201ENST00000231130 PKD2Q13563 968 aa18.73■□□□□ 0.59
PCDHB3-201ENST00000231130 RSPH6AQ9H0K4 717 aa18.72■□□□□ 0.59
PCDHB3-201ENST00000231130 FRAT1Q92837 279 aaPredicted RBP18.72■□□□□ 0.59
PCDHB3-201ENST00000231130 ST20-MTHFSA0A0A6YYL1 179 aa18.7■□□□□ 0.58
PCDHB3-201ENST00000231130 ARXQ96QS3 562 aa18.7■□□□□ 0.58
PCDHB3-201ENST00000231130 SUPT6HQ7KZ85 1726 aaKnown RBP18.7■□□□□ 0.58
PCDHB3-201ENST00000231130 MAGI3Q5TCQ9 1506 aa18.7■□□□□ 0.58
PCDHB3-201ENST00000231130 DHX29Q7Z478 1369 aaKnown RBP18.69■□□□□ 0.58
PCDHB3-201ENST00000231130 TOPBP1Q92547 1522 aa18.68■□□□□ 0.58
PCDHB3-201ENST00000231130 CDK13Q14004 1512 aaKnown RBP18.67■□□□□ 0.58
PCDHB3-201ENST00000231130 CC2D1BQ5T0F9 858 aaKnown RBP18.67■□□□□ 0.58
PCDHB3-201ENST00000231130 WASHC2CQ9Y4E1 1318 aa18.67■□□□□ 0.58
PCDHB3-201ENST00000231130 ABCA10Q8WWZ4 1543 aa18.67■□□□□ 0.58
PCDHB3-201ENST00000231130 TCERG1O14776 1098 aaKnown RBP18.67■□□□□ 0.58
PCDHB3-201ENST00000231130 ZMYND15Q9H091 742 aa18.67■□□□□ 0.58
PCDHB3-201ENST00000231130 GRIN2BQ13224 1484 aa18.67■□□□□ 0.58
PCDHB3-201ENST00000231130 RPRD2Q5VT52 1461 aaKnown RBP18.65■□□□□ 0.58
PCDHB3-201ENST00000231130 RNF123Q5XPI4 1314 aa18.65■□□□□ 0.58
PCDHB3-201ENST00000231130 EHBP1L1Q8N3D4 1523 aa18.65■□□□□ 0.58
PCDHB3-201ENST00000231130 DCAF11Q8TEB1 546 aa18.65■□□□□ 0.58
PCDHB3-201ENST00000231130 BACH2Q9BYV9 841 aa18.64■□□□□ 0.58
PCDHB3-201ENST00000231130 SPATA31E1Q6ZUB1 1445 aa18.64■□□□□ 0.57
PCDHB3-201ENST00000231130 PLEKHG5O94827 1062 aa18.64■□□□□ 0.57
PCDHB3-201ENST00000231130 NFKBIBQ15653 356 aa18.64■□□□□ 0.57
PCDHB3-201ENST00000231130 RGL3Q3MIN7 710 aa18.64■□□□□ 0.57
PCDHB3-201ENST00000231130 UGGT2Q9NYU1 1516 aa18.64■□□□□ 0.57
PCDHB3-201ENST00000231130 CFDP1Q9UEE9 299 aaPredicted RBP18.63■□□□□ 0.57
PCDHB3-201ENST00000231130 LRRIQ1Q96JM4 1722 aa18.62■□□□□ 0.57
PCDHB3-201ENST00000231130 CRBNQ96SW2 442 aa18.61■□□□□ 0.57
PCDHB3-201ENST00000231130 NAP1L5Q96NT1 182 aaPredicted RBP18.61■□□□□ 0.57
PCDHB3-201ENST00000231130 PODXL2Q9NZ53 605 aa18.61■□□□□ 0.57
PCDHB3-201ENST00000231130 CTTNBP2Q8WZ74 1663 aa18.6■□□□□ 0.57
PCDHB3-201ENST00000231130 TEX14Q8IWB6 1497 aa18.59■□□□□ 0.57
PCDHB3-201ENST00000231130 GAPVD1Q14C86 1478 aa18.59■□□□□ 0.57
PCDHB3-201ENST00000231130 MYBBP1AQ9BQG0 1328 aaKnown RBP18.58■□□□□ 0.56
PCDHB3-201ENST00000231130 RGS3P49796 1198 aa18.58■□□□□ 0.56
PCDHB3-201ENST00000231130 HECW1Q76N89 1606 aa18.57■□□□□ 0.56
PCDHB3-201ENST00000231130 DAPK1P53355 1430 aa18.56■□□□□ 0.56
PCDHB3-201ENST00000231130 DNMBPQ6XZF7 1577 aa18.56■□□□□ 0.56
PCDHB3-201ENST00000231130 C20orf194Q5TEA3 1177 aa18.56■□□□□ 0.56
PCDHB3-201ENST00000231130 EPRSP07814 1512 aaKnown RBP18.55■□□□□ 0.56
PCDHB3-201ENST00000231130 KIF15Q9NS87 1388 aa18.55■□□□□ 0.56
PCDHB3-201ENST00000231130 ABCC5O15440 1437 aa18.55■□□□□ 0.56
PCDHB3-201ENST00000231130 ARID4BQ4LE39 1312 aaPredicted RBP18.55■□□□□ 0.56
PCDHB3-201ENST00000231130 DDRGK1Q96HY6 314 aa18.53■□□□□ 0.56
PCDHB3-201ENST00000231130 CUL7Q14999 1698 aa18.52■□□□□ 0.56
PCDHB3-201ENST00000231130 RALBP1Q15311 655 aa18.51■□□□□ 0.55
PCDHB3-201ENST00000231130 THOC2Q8NI27 1593 aaKnown RBP18.51■□□□□ 0.55
PCDHB3-201ENST00000231130 HSP90AA2PQ14568 343 aaPredicted RBP18.51■□□□□ 0.55
PCDHB3-201ENST00000231130 NUP155O75694 1391 aa18.51■□□□□ 0.55
PCDHB3-201ENST00000231130 PRDM2Q13029 1718 aa18.51■□□□□ 0.55
PCDHB3-201ENST00000231130 TCOF1Q13428 1488 aaKnown RBP18.51■□□□□ 0.55
PCDHB3-201ENST00000231130 CC2D2AQ9P2K1 1620 aa18.51■□□□□ 0.55
PCDHB3-201ENST00000231130 NLRP13Q86W25 1043 aa18.51■□□□□ 0.55
PCDHB3-201ENST00000231130 FAM43AQ8N2R8 423 aa18.51■□□□□ 0.55
PCDHB3-201ENST00000231130 DNAJC5BQ9UF47 199 aa18.51■□□□□ 0.55
PCDHB3-201ENST00000231130 MIA2Q96PC5 1412 aa18.5■□□□□ 0.55
PCDHB3-201ENST00000231130 FRAT2O75474 233 aaPredicted RBP18.5■□□□□ 0.55
PCDHB3-201ENST00000231130 BCORL1Q5H9F3 1711 aa18.49■□□□□ 0.55
PCDHB3-201ENST00000231130 FBLN2P98095 1184 aa18.49■□□□□ 0.55
PCDHB3-201ENST00000231130 GCC2Q8IWJ2 1684 aa18.49■□□□□ 0.55
PCDHB3-201ENST00000231130 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.49■□□□□ 0.55
PCDHB3-201ENST00000231130 MS4A1P11836 297 aa18.47■□□□□ 0.55
PCDHB3-201ENST00000231130 NBPF1Q3BBV0 1214 aa18.47■□□□□ 0.55
PCDHB3-201ENST00000231130 PDS5BQ9NTI5 1447 aa18.47■□□□□ 0.55
PCDHB3-201ENST00000231130 SAMD9Q5K651 1589 aa18.47■□□□□ 0.55
PCDHB3-201ENST00000231130 ROCK2O75116 1388 aaKnown RBP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms