RNA–Protein interactions for RNA: ENST00000220478.7

SCG3-201, Transcript of secretogranin III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG3, Length 3,315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-201ENST00000220478 CFAP44Q96MT7 982 aa10.79□□□□□ -0.68
SCG3-201ENST00000220478 NCOA1Q15788 1441 aa10.79□□□□□ -0.68
SCG3-201ENST00000220478 TONSLQ96HA7 1378 aa10.78□□□□□ -0.68
SCG3-201ENST00000220478 PRKRIP1Q9H875 184 aaPredicted RBP10.78□□□□□ -0.68
SCG3-201ENST00000220478 FOXD4L1Q9NU39 408 aa10.78□□□□□ -0.68
SCG3-201ENST00000220478 HECW1Q76N89 1606 aa10.78□□□□□ -0.68
SCG3-201ENST00000220478 KDM6BO15054 1643 aa10.77□□□□□ -0.68
SCG3-201ENST00000220478 HSPA5P11021 654 aaKnown RBP10.77□□□□□ -0.69
SCG3-201ENST00000220478 NAIPQ13075 1403 aa10.77□□□□□ -0.69
SCG3-201ENST00000220478 FAM50AQ14320 339 aaKnown RBP10.76□□□□□ -0.69
SCG3-201ENST00000220478 GCC2Q8IWJ2 1684 aa10.76□□□□□ -0.69
SCG3-201ENST00000220478 DHX37Q8IY37 1157 aaKnown RBP10.75□□□□□ -0.69
SCG3-201ENST00000220478 PRDM2Q13029 1718 aa10.75□□□□□ -0.69
SCG3-201ENST00000220478 FGD6Q6ZV73 1430 aa10.75□□□□□ -0.69
SCG3-201ENST00000220478 IGF1RP08069 1367 aa10.75□□□□□ -0.69
SCG3-201ENST00000220478 CNKSR2Q8WXI2 1034 aa10.74□□□□□ -0.69
SCG3-201ENST00000220478 SPATA31E1Q6ZUB1 1445 aa10.74□□□□□ -0.69
SCG3-201ENST00000220478 CCDC7Q96M83 1385 aa10.73□□□□□ -0.69
SCG3-201ENST00000220478 FYCO1Q9BQS8 1478 aa10.73□□□□□ -0.69
SCG3-201ENST00000220478 CCDC9Q9Y3X0 531 aaKnown RBP10.73□□□□□ -0.69
SCG3-201ENST00000220478 BCORL1Q5H9F3 1711 aa10.72□□□□□ -0.69
SCG3-201ENST00000220478 ZBTB47Q9UFB7 747 aaPredicted RBP10.72□□□□□ -0.69
SCG3-201ENST00000220478 BRPF3Q9ULD4 1205 aa10.72□□□□□ -0.69
SCG3-201ENST00000220478 FAM9BQ8IZU0 186 aa10.71□□□□□ -0.69
SCG3-201ENST00000220478 SNAPC4Q5SXM2 1469 aa10.71□□□□□ -0.7
SCG3-201ENST00000220478 DHX29Q7Z478 1369 aaKnown RBP10.71□□□□□ -0.7
SCG3-201ENST00000220478 ANP32AP39687 249 aaKnown RBP10.71□□□□□ -0.7
SCG3-201ENST00000220478 FGD5Q6ZNL6 1462 aa10.7□□□□□ -0.7
SCG3-201ENST00000220478 RTL5Q5HYW3 569 aaPredicted RBP10.69□□□□□ -0.7
SCG3-201ENST00000220478 CASKIN1Q8WXD9 1431 aa10.68□□□□□ -0.7
SCG3-201ENST00000220478 PABPN1Q86U42 306 aaKnown RBP eCLIP10.68□□□□□ -0.7
SCG3-201ENST00000220478 TEX14Q8IWB6 1497 aa10.68□□□□□ -0.7
SCG3-201ENST00000220478 ARID3AQ99856 593 aa10.68□□□□□ -0.7
SCG3-201ENST00000220478 USP35Q9P2H5 1018 aa10.68□□□□□ -0.7
SCG3-201ENST00000220478 MRS2Q9HD23 443 aa10.67□□□□□ -0.7
SCG3-201ENST00000220478 NUDCQ9Y266 331 aa10.67□□□□□ -0.7
SCG3-201ENST00000220478 LAS1LQ9Y4W2 734 aaKnown RBP10.67□□□□□ -0.7
SCG3-201ENST00000220478 FHOD3Q2V2M9 1422 aa10.67□□□□□ -0.7
SCG3-201ENST00000220478 ARHGEF11O15085 1522 aa10.67□□□□□ -0.7
SCG3-201ENST00000220478 NEFMP07197 916 aa10.66□□□□□ -0.7
SCG3-201ENST00000220478 CTTNBP2Q8WZ74 1663 aa10.66□□□□□ -0.7
SCG3-201ENST00000220478 CFTRP13569 1480 aa10.66□□□□□ -0.7
SCG3-201ENST00000220478 KIF7Q2M1P5 1343 aa10.65□□□□□ -0.7
SCG3-201ENST00000220478 HSP90B1P14625 803 aaKnown RBP10.64□□□□□ -0.71
SCG3-201ENST00000220478 BACH2Q9BYV9 841 aa10.64□□□□□ -0.71
SCG3-201ENST00000220478 BRD2P25440 801 aaKnown RBP10.64□□□□□ -0.71
SCG3-201ENST00000220478 PDE4CQ08493 712 aa10.64□□□□□ -0.71
SCG3-201ENST00000220478 EFCAB5A4FU69 1503 aa10.63□□□□□ -0.71
SCG3-201ENST00000220478 MAGI3Q5TCQ9 1506 aa10.63□□□□□ -0.71
SCG3-201ENST00000220478 NBPF8Q3BBV2 869 aa10.63□□□□□ -0.71
SCG3-201ENST00000220478 CARMIL1Q5VZK9 1371 aa10.63□□□□□ -0.71
SCG3-201ENST00000220478 HMGXB3Q12766 1538 aa10.63□□□□□ -0.71
SCG3-201ENST00000220478 FMN1Q68DA7 1419 aa10.63□□□□□ -0.71
SCG3-201ENST00000220478 EIF4G2P78344 907 aaKnown RBP eCLIP10.62□□□□□ -0.71
SCG3-201ENST00000220478 TRHP20396 242 aaPredicted RBP10.62□□□□□ -0.71
SCG3-201ENST00000220478 PDE4AP27815 886 aa10.62□□□□□ -0.71
SCG3-201ENST00000220478 E9PCH4 1651 aa10.61□□□□□ -0.71
SCG3-201ENST00000220478 UGGT2Q9NYU1 1516 aa10.61□□□□□ -0.71
SCG3-201ENST00000220478 SUPT6HQ7KZ85 1726 aaKnown RBP10.6□□□□□ -0.71
SCG3-201ENST00000220478 LRPPRCP42704 1394 aaKnown RBP10.6□□□□□ -0.71
SCG3-201ENST00000220478 DCAF11Q8TEB1 546 aa10.6□□□□□ -0.71
SCG3-201ENST00000220478 MYOM3Q5VTT5 1437 aa10.6□□□□□ -0.71
SCG3-201ENST00000220478 SAMD9Q5K651 1589 aa10.6□□□□□ -0.71
SCG3-201ENST00000220478 TCOF1Q13428 1488 aaKnown RBP10.6□□□□□ -0.71
SCG3-201ENST00000220478 MBD5Q9P267 1494 aa10.6□□□□□ -0.71
SCG3-201ENST00000220478 HMGB1P09429 215 aaKnown RBP10.6□□□□□ -0.71
SCG3-201ENST00000220478 GSE1Q14687 1217 aa10.6□□□□□ -0.71
SCG3-201ENST00000220478 L3MBTL2Q969R5 705 aa10.6□□□□□ -0.71
SCG3-201ENST00000220478 FRAT1Q92837 279 aaPredicted RBP10.59□□□□□ -0.71
SCG3-201ENST00000220478 RPRD2Q5VT52 1461 aaKnown RBP10.59□□□□□ -0.71
SCG3-201ENST00000220478 KDM5CP41229 1560 aa10.59□□□□□ -0.71
SCG3-201ENST00000220478 SKAP1Q86WV1 359 aa10.59□□□□□ -0.71
SCG3-201ENST00000220478 NPM1P06748 294 aaKnown RBP eCLIP10.58□□□□□ -0.72
SCG3-201ENST00000220478 GRIN2BQ13224 1484 aa10.58□□□□□ -0.72
SCG3-201ENST00000220478 EXOC6Q8TAG9 804 aa10.58□□□□□ -0.72
SCG3-201ENST00000220478 VIRMAQ69YN4 1812 aaKnown RBP10.58□□□□□ -0.72
SCG3-201ENST00000220478 SENP3-EIF4A1A0A087X0R7 540 aa10.58□□□□□ -0.72
SCG3-201ENST00000220478 NFKBIBQ15653 356 aa10.57□□□□□ -0.72
SCG3-201ENST00000220478 P3H3Q8IVL6 736 aa10.57□□□□□ -0.72
SCG3-201ENST00000220478 PNISRQ8TF01 805 aaKnown RBP10.57□□□□□ -0.72
SCG3-201ENST00000220478 BBXQ8WY36 941 aaPredicted RBP10.57□□□□□ -0.72
SCG3-201ENST00000220478 TCERG1O14776 1098 aaKnown RBP10.57□□□□□ -0.72
SCG3-201ENST00000220478 ANKRD30BQ9BXX2 1392 aa10.56□□□□□ -0.72
SCG3-201ENST00000220478 NECTIN2Q92692 538 aa10.56□□□□□ -0.72
SCG3-201ENST00000220478 ZBTB7CA1YPR0 619 aa10.55□□□□□ -0.72
SCG3-201ENST00000220478 RRP1P56182 461 aaKnown RBP10.55□□□□□ -0.72
SCG3-201ENST00000220478 PKD2Q13563 968 aa10.55□□□□□ -0.72
SCG3-201ENST00000220478 THOC2Q8NI27 1593 aaKnown RBP10.54□□□□□ -0.72
SCG3-201ENST00000220478 PPM1GO15355 546 aaPredicted RBP10.54□□□□□ -0.72
SCG3-201ENST00000220478 MS4A1P11836 297 aa10.54□□□□□ -0.72
SCG3-201ENST00000220478 EHBP1L1Q8N3D4 1523 aa10.54□□□□□ -0.72
SCG3-201ENST00000220478 MIA2Q96PC5 1412 aa10.54□□□□□ -0.72
SCG3-201ENST00000220478 KIF14Q15058 1648 aa10.53□□□□□ -0.72
SCG3-201ENST00000220478 MAPK8IP2Q13387 824 aaPredicted RBP10.52□□□□□ -0.73
SCG3-201ENST00000220478 TAF7LQ5H9L4 462 aa10.52□□□□□ -0.73
SCG3-201ENST00000220478 CC2D2AQ9P2K1 1620 aa10.51□□□□□ -0.73
SCG3-201ENST00000220478 SLC4A3P48751 1232 aa10.51□□□□□ -0.73
SCG3-201ENST00000220478 FAM43AQ8N2R8 423 aa10.51□□□□□ -0.73
SCG3-201ENST00000220478 CUL7Q14999 1698 aa10.51□□□□□ -0.73
SCG3-201ENST00000220478 MPHOSPH9Q99550 1183 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms