RNA–Protein interactions for RNA: ENSMUST00000200963.3

Scn8a-208, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 5 BASIC

Gene Scn8a, Length 5,814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-208ENSMUST00000200963 Rundc1Q0VDN7 615 aa14.92□□□□□ -0.02
Scn8a-208ENSMUST00000200963 Sart3Q9JLI8 962 aaKnown RBP14.91□□□□□ -0.02
Scn8a-208ENSMUST00000200963 Tnnt1O88346 262 aa14.91□□□□□ -0.02
Scn8a-208ENSMUST00000200963 Ggt6Q6PDE7 497 aa14.91□□□□□ -0.02
Scn8a-208ENSMUST00000200963 Supt16hQ920B9 1047 aa14.9□□□□□ -0.02
Scn8a-208ENSMUST00000200963 NacadQ5SWP3 1504 aa14.9□□□□□ -0.02
Scn8a-208ENSMUST00000200963 Mak16Q8BGS0 296 aaKnown RBP14.9□□□□□ -0.02
Scn8a-208ENSMUST00000200963 Q8BT18 775 aa14.9□□□□□ -0.02
Scn8a-208ENSMUST00000200963 Map4P27546 1125 aaKnown RBP14.89□□□□□ -0.03
Scn8a-208ENSMUST00000200963 Irx3P81067 507 aa14.89□□□□□ -0.03
Scn8a-208ENSMUST00000200963 Tnnt2P50752 301 aa14.88□□□□□ -0.03
Scn8a-208ENSMUST00000200963 Tmco5bQ80X59 307 aa14.88□□□□□ -0.03
Scn8a-208ENSMUST00000200963 Ifit1bl1D3Z6F0 470 aa14.88□□□□□ -0.03
Scn8a-208ENSMUST00000200963 Iffo2Q8R2V2 512 aa14.88□□□□□ -0.03
Scn8a-208ENSMUST00000200963 Gtf2e1Q9D0D5 440 aa14.88□□□□□ -0.03
Scn8a-208ENSMUST00000200963 Nol10Q5RJG1 687 aaKnown RBP14.88□□□□□ -0.03
Scn8a-208ENSMUST00000200963 CgnP59242 1191 aa14.87□□□□□ -0.03
Scn8a-208ENSMUST00000200963 Chmp5Q9D7S9 219 aa14.87□□□□□ -0.03
Scn8a-208ENSMUST00000200963 Tmf1B9EKI3 1091 aa14.86□□□□□ -0.03
Scn8a-208ENSMUST00000200963 Q3TQI7 289 aaKnown RBP14.86□□□□□ -0.03
Scn8a-208ENSMUST00000200963 Tcerg1Q8CGF7 1100 aaKnown RBP14.86□□□□□ -0.03
Scn8a-208ENSMUST00000200963 Calcoco2A2A6M5 331 aa14.86□□□□□ -0.03
Scn8a-208ENSMUST00000200963 U2af1Q9D883 239 aaKnown RBP14.86□□□□□ -0.03
Scn8a-208ENSMUST00000200963 PtmsQ9D0J8 101 aaKnown RBP14.85□□□□□ -0.03
Scn8a-208ENSMUST00000200963 Pkd2O35245 966 aa14.85□□□□□ -0.03
Scn8a-208ENSMUST00000200963 Dnai1Q8C0M8 701 aa14.85□□□□□ -0.03
Scn8a-208ENSMUST00000200963 AU015836B2RUM3 263 aa14.84□□□□□ -0.03
Scn8a-208ENSMUST00000200963 Znf330Q922H9 316 aa14.84□□□□□ -0.03
Scn8a-208ENSMUST00000200963 EspnQ9ET47 871 aa14.84□□□□□ -0.03
Scn8a-208ENSMUST00000200963 Birc3O08863 600 aa14.84□□□□□ -0.03
Scn8a-208ENSMUST00000200963 Cluap1Q8R3P7 413 aa14.84□□□□□ -0.03
Scn8a-208ENSMUST00000200963 Exoc6Q8R313 802 aa14.84□□□□□ -0.03
Scn8a-208ENSMUST00000200963 MecomP14404 1042 aa14.83□□□□□ -0.04
Scn8a-208ENSMUST00000200963 MsnP26041 577 aaKnown RBP14.83□□□□□ -0.04
Scn8a-208ENSMUST00000200963 Sox12Q04890 314 aa14.83□□□□□ -0.04
Scn8a-208ENSMUST00000200963 Mfap1aC0HKD8 439 aaKnown RBP14.82□□□□□ -0.04
Scn8a-208ENSMUST00000200963 Mfap1bC0HKD9 439 aaKnown RBP14.82□□□□□ -0.04
Scn8a-208ENSMUST00000200963 Senp3Q9EP97 568 aaKnown RBP14.82□□□□□ -0.04
Scn8a-208ENSMUST00000200963 Pde3bQ61409 1100 aa14.82□□□□□ -0.04
Scn8a-208ENSMUST00000200963 Kif27Q7M6Z4 1394 aa14.82□□□□□ -0.04
Scn8a-208ENSMUST00000200963 Baz1aO88379 1555 aa14.82□□□□□ -0.04
Scn8a-208ENSMUST00000200963 Tpm3-rs7D3Z2H9 248 aa14.81□□□□□ -0.04
Scn8a-208ENSMUST00000200963 Psme1P97371 249 aa14.81□□□□□ -0.04
Scn8a-208ENSMUST00000200963 Golga2Q921M4 999 aa14.8□□□□□ -0.04
Scn8a-208ENSMUST00000200963 Dcaf11Q91VU6 549 aa14.79□□□□□ -0.04
Scn8a-208ENSMUST00000200963 Dnai2A2AC93 623 aa14.79□□□□□ -0.04
Scn8a-208ENSMUST00000200963 Arid3cA6PWV5 409 aa14.78□□□□□ -0.04
Scn8a-208ENSMUST00000200963 Sin3aQ60520 1274 aaKnown RBP14.78□□□□□ -0.04
Scn8a-208ENSMUST00000200963 R3hcc1Q8BSI6 488 aa14.77□□□□□ -0.04
Scn8a-208ENSMUST00000200963 CrebrfQ8CDG5 640 aaKnown RBP14.77□□□□□ -0.05
Scn8a-208ENSMUST00000200963 Spag9Q58A65 1321 aaKnown RBP14.77□□□□□ -0.05
Scn8a-208ENSMUST00000200963 Zscan21Q07231 555 aa14.77□□□□□ -0.05
Scn8a-208ENSMUST00000200963 Ipo8Q7TMY7 1010 aa14.77□□□□□ -0.05
Scn8a-208ENSMUST00000200963 GorabQ8BRM2 368 aa14.76□□□□□ -0.05
Scn8a-208ENSMUST00000200963 Bcl11aQ9QYE3 773 aa14.76□□□□□ -0.05
Scn8a-208ENSMUST00000200963 Trak1Q6PD31 939 aa14.76□□□□□ -0.05
Scn8a-208ENSMUST00000200963 Brpf1B2RRD7 1212 aa14.75□□□□□ -0.05
Scn8a-208ENSMUST00000200963 Chmp3Q9CQ10 224 aa14.75□□□□□ -0.05
Scn8a-208ENSMUST00000200963 AknaQ80VW7 1404 aa14.74□□□□□ -0.05
Scn8a-208ENSMUST00000200963 Cald1E9QA15 768 aaKnown RBP14.74□□□□□ -0.05
Scn8a-208ENSMUST00000200963 Ipo9Q91YE6 1041 aa14.74□□□□□ -0.05
Scn8a-208ENSMUST00000200963 Txndc2Q6P902 515 aa14.74□□□□□ -0.05
Scn8a-208ENSMUST00000200963 Mical1Q8VDP3 1048 aa14.73□□□□□ -0.05
Scn8a-208ENSMUST00000200963 Rock2P70336 1388 aa14.73□□□□□ -0.05
Scn8a-208ENSMUST00000200963 Smarce1O54941 411 aaKnown RBP14.73□□□□□ -0.05
Scn8a-208ENSMUST00000200963 Pibf1E9Q6K3 756 aa14.73□□□□□ -0.05
Scn8a-208ENSMUST00000200963 Isy1Q69ZQ2 285 aaKnown RBP14.72□□□□□ -0.05
Scn8a-208ENSMUST00000200963 CrbnQ8C7D2 445 aa14.72□□□□□ -0.05
Scn8a-208ENSMUST00000200963 RdxP26043 583 aaKnown RBP14.72□□□□□ -0.05
Scn8a-208ENSMUST00000200963 Kiaa0754Q69ZZ9 979 aa14.71□□□□□ -0.05
Scn8a-208ENSMUST00000200963 Mphosph9A6H5Y1 991 aa14.7□□□□□ -0.06
Scn8a-208ENSMUST00000200963 Rpap1Q80TE0 1409 aa14.7□□□□□ -0.06
Scn8a-208ENSMUST00000200963 Ksr2Q3UVC0 959 aa14.7□□□□□ -0.06
Scn8a-208ENSMUST00000200963 Lemd3Q9WU40 921 aa14.69□□□□□ -0.06
Scn8a-208ENSMUST00000200963 Gpatch11Q3UFS4 262 aa14.68□□□□□ -0.06
Scn8a-208ENSMUST00000200963 HdgfP51859 237 aaKnown RBP14.68□□□□□ -0.06
Scn8a-208ENSMUST00000200963 Aebp1Q640N1 1128 aa14.68□□□□□ -0.06
Scn8a-208ENSMUST00000200963 SetQ9EQU5 289 aaKnown RBP14.68□□□□□ -0.06
Scn8a-208ENSMUST00000200963 MlecQ6ZQI3 291 aaKnown RBP14.67□□□□□ -0.06
Scn8a-208ENSMUST00000200963 Ccar1Q8CH18 1146 aaKnown RBP14.67□□□□□ -0.06
Scn8a-208ENSMUST00000200963 Cabp1Q9JLK7 227 aa14.67□□□□□ -0.06
Scn8a-208ENSMUST00000200963 Tpd52l1O54818 204 aa14.66□□□□□ -0.06
Scn8a-208ENSMUST00000200963 Rrp12Q6P5B0 1295 aaKnown RBP14.66□□□□□ -0.06
Scn8a-208ENSMUST00000200963 Noc3lQ8VI84 807 aaKnown RBP14.65□□□□□ -0.06
Scn8a-208ENSMUST00000200963 SlkO54988 1233 aa14.65□□□□□ -0.06
Scn8a-208ENSMUST00000200963 Vps53Q8CCB4 832 aa14.65□□□□□ -0.06
Scn8a-208ENSMUST00000200963 Fyco1Q8VDC1 1437 aa14.65□□□□□ -0.06
Scn8a-208ENSMUST00000200963 Ccer1Q9CQL2 403 aa14.64□□□□□ -0.07
Scn8a-208ENSMUST00000200963 Arhgap35Q91YM2 1499 aa14.64□□□□□ -0.07
Scn8a-208ENSMUST00000200963 Tpm3P21107 285 aaKnown RBP14.63□□□□□ -0.07
Scn8a-208ENSMUST00000200963 Slc4a10Q5DTL9 1118 aa14.63□□□□□ -0.07
Scn8a-208ENSMUST00000200963 Ccdc146E9Q9F7 977 aa14.63□□□□□ -0.07
Scn8a-208ENSMUST00000200963 Srcin1Q9QWI6 1250 aa14.63□□□□□ -0.07
Scn8a-208ENSMUST00000200963 Nup155Q99P88 1391 aaKnown RBP14.62□□□□□ -0.07
Scn8a-208ENSMUST00000200963 Trim30aP15533 496 aa14.61□□□□□ -0.07
Scn8a-208ENSMUST00000200963 Atp6v1dP57746 247 aa14.61□□□□□ -0.07
Scn8a-208ENSMUST00000200963 Kif3bQ61771 747 aa14.61□□□□□ -0.07
Scn8a-208ENSMUST00000200963 Ccdc47Q9D024 483 aaKnown RBP14.61□□□□□ -0.07
Scn8a-208ENSMUST00000200963 Slc4a1apE9PX68 744 aa14.6□□□□□ -0.07
Scn8a-208ENSMUST00000200963 Pak3Q61036 559 aa14.6□□□□□ -0.07
Retrieved 100 of 22,080 RNA–protein pairs in 27.8 ms