RNA–Protein interactions for RNA: ENSMUST00000194038.1

Pcdha8-201, Transcript of Protocadherin alpha 8, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha8, Length 5,338 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8-201ENSMUST00000194038 Ddrgk1Q80WW9 315 aa18.09■□□□□ 0.49
Pcdha8-201ENSMUST00000194038 Stag3O70576 1240 aa18.09■□□□□ 0.49
Pcdha8-201ENSMUST00000194038 Znf316Q6PGE4 1016 aa18.09■□□□□ 0.49
Pcdha8-201ENSMUST00000194038 Cep162Q6ZQ06 1403 aa18.08■□□□□ 0.49
Pcdha8-201ENSMUST00000194038 Safb2Q80YR5 991 aaKnown RBP18.08■□□□□ 0.48
Pcdha8-201ENSMUST00000194038 Nolc1E9Q5C9 702 aaKnown RBP18.07■□□□□ 0.48
Pcdha8-201ENSMUST00000194038 Sin3aQ60520 1274 aaKnown RBP18.07■□□□□ 0.48
Pcdha8-201ENSMUST00000194038 Plppr3Q7TPB0 716 aa18.07■□□□□ 0.48
Pcdha8-201ENSMUST00000194038 Tmf1B9EKI3 1091 aa18.05■□□□□ 0.48
Pcdha8-201ENSMUST00000194038 Arhgap27A2AB59 869 aa18.03■□□□□ 0.48
Pcdha8-201ENSMUST00000194038 Baz1bQ9Z277 1479 aa18.03■□□□□ 0.48
Pcdha8-201ENSMUST00000194038 Pcmtd1P59913 357 aa18.03■□□□□ 0.48
Pcdha8-201ENSMUST00000194038 CntlnA2AM05 1397 aa18.02■□□□□ 0.48
Pcdha8-201ENSMUST00000194038 1700019A02RikA0A087WPV9 146 aa18.02■□□□□ 0.47
Pcdha8-201ENSMUST00000194038 Fyco1Q8VDC1 1437 aa18.01■□□□□ 0.47
Pcdha8-201ENSMUST00000194038 Stk24Q99KH8 431 aa18■□□□□ 0.47
Pcdha8-201ENSMUST00000194038 RdxP26043 583 aaKnown RBP18■□□□□ 0.47
Pcdha8-201ENSMUST00000194038 Arhgap35Q91YM2 1499 aa18■□□□□ 0.47
Pcdha8-201ENSMUST00000194038 Mfap1aC0HKD8 439 aaKnown RBP17.99■□□□□ 0.47
Pcdha8-201ENSMUST00000194038 Mfap1bC0HKD9 439 aaKnown RBP17.99■□□□□ 0.47
Pcdha8-201ENSMUST00000194038 Pde3bQ61409 1100 aa17.99■□□□□ 0.47
Pcdha8-201ENSMUST00000194038 Ccdc88bQ4QRL3 1481 aa17.98■□□□□ 0.47
Pcdha8-201ENSMUST00000194038 Sart3Q9JLI8 962 aaKnown RBP17.98■□□□□ 0.47
Pcdha8-201ENSMUST00000194038 Map4P27546 1125 aaKnown RBP17.98■□□□□ 0.47
Pcdha8-201ENSMUST00000194038 VgfQ0VGU4 617 aa17.97■□□□□ 0.47
Pcdha8-201ENSMUST00000194038 Cnga1P29974 684 aa17.97■□□□□ 0.47
Pcdha8-201ENSMUST00000194038 Becn1O88597 448 aa17.97■□□□□ 0.47
Pcdha8-201ENSMUST00000194038 Golga2Q921M4 999 aa17.96■□□□□ 0.47
Pcdha8-201ENSMUST00000194038 ChgaP26339 463 aaKnown RBP17.96■□□□□ 0.47
Pcdha8-201ENSMUST00000194038 Mphosph9A6H5Y1 991 aa17.96■□□□□ 0.47
Pcdha8-201ENSMUST00000194038 Sh3bp5Q9Z131 463 aa17.95■□□□□ 0.46
Pcdha8-201ENSMUST00000194038 SlkO54988 1233 aa17.94■□□□□ 0.46
Pcdha8-201ENSMUST00000194038 Kiaa0754Q69ZZ9 979 aa17.94■□□□□ 0.46
Pcdha8-201ENSMUST00000194038 Mre11Q61216 706 aa17.94■□□□□ 0.46
Pcdha8-201ENSMUST00000194038 Kif27Q7M6Z4 1394 aa17.93■□□□□ 0.46
Pcdha8-201ENSMUST00000194038 Taok2Q6ZQ29 1240 aa17.93■□□□□ 0.46
Pcdha8-201ENSMUST00000194038 Fmn1Q05860 1466 aa17.93■□□□□ 0.46
Pcdha8-201ENSMUST00000194038 Ercc6F8VPZ5 1481 aa17.93■□□□□ 0.46
Pcdha8-201ENSMUST00000194038 Cald1E9QA15 768 aaKnown RBP17.92■□□□□ 0.46
Pcdha8-201ENSMUST00000194038 Smarce1O54941 411 aaKnown RBP17.92■□□□□ 0.46
Pcdha8-201ENSMUST00000194038 Cluap1Q8R3P7 413 aa17.92■□□□□ 0.46
Pcdha8-201ENSMUST00000194038 Smg6P61406 1418 aaKnown RBP17.92■□□□□ 0.46
Pcdha8-201ENSMUST00000194038 Gtf2e1Q9D0D5 440 aa17.91■□□□□ 0.46
Pcdha8-201ENSMUST00000194038 R3hcc1Q8BSI6 488 aa17.89■□□□□ 0.45
Pcdha8-201ENSMUST00000194038 Ush1cQ9ES64 910 aa17.89■□□□□ 0.45
Pcdha8-201ENSMUST00000194038 U2af1Q9D883 239 aaKnown RBP17.89■□□□□ 0.45
Pcdha8-201ENSMUST00000194038 Ifit1bl1D3Z6F0 470 aa17.89■□□□□ 0.45
Pcdha8-201ENSMUST00000194038 Trim30aP15533 496 aa17.88■□□□□ 0.45
Pcdha8-201ENSMUST00000194038 Atp6v1dP57746 247 aa17.88■□□□□ 0.45
Pcdha8-201ENSMUST00000194038 Rock2P70336 1388 aa17.88■□□□□ 0.45
Pcdha8-201ENSMUST00000194038 Map7d2A2AG50 781 aa17.88■□□□□ 0.45
Pcdha8-201ENSMUST00000194038 Cspp1B2RX88 1205 aa17.88■□□□□ 0.45
Pcdha8-201ENSMUST00000194038 Rsph3aQ3UFY4 516 aa17.88■□□□□ 0.45
Pcdha8-201ENSMUST00000194038 Tmco5bQ80X59 307 aa17.88■□□□□ 0.45
Pcdha8-201ENSMUST00000194038 Rtf1A2AQ19 715 aaKnown RBP17.86■□□□□ 0.45
Pcdha8-201ENSMUST00000194038 CgnP59242 1191 aa17.86■□□□□ 0.45
Pcdha8-201ENSMUST00000194038 Rassf8Q8CJ96 419 aa17.86■□□□□ 0.45
Pcdha8-201ENSMUST00000194038 Iffo2Q8R2V2 512 aa17.86■□□□□ 0.45
Pcdha8-201ENSMUST00000194038 U2surpQ6NV83 1029 aaKnown RBP17.86■□□□□ 0.45
Pcdha8-201ENSMUST00000194038 Anapc15P60007 132 aa17.85■□□□□ 0.45
Pcdha8-201ENSMUST00000194038 Trak1Q6PD31 939 aa17.85■□□□□ 0.45
Pcdha8-201ENSMUST00000194038 Aebp1Q640N1 1128 aa17.85■□□□□ 0.45
Pcdha8-201ENSMUST00000194038 Ylpm1Q9R0I7 1386 aaKnown RBP17.85■□□□□ 0.45
Pcdha8-201ENSMUST00000194038 CrbnQ8C7D2 445 aa17.85■□□□□ 0.45
Pcdha8-201ENSMUST00000194038 Ccar1Q8CH18 1146 aaKnown RBP17.85■□□□□ 0.45
Pcdha8-201ENSMUST00000194038 Pknox2Q8BG99 474 aa17.84■□□□□ 0.45
Pcdha8-201ENSMUST00000194038 Rtn4Q99P72 1162 aaKnown RBP17.84■□□□□ 0.45
Pcdha8-201ENSMUST00000194038 GorabQ8BRM2 368 aa17.84■□□□□ 0.45
Pcdha8-201ENSMUST00000194038 SetQ9EQU5 289 aaKnown RBP17.84■□□□□ 0.45
Pcdha8-201ENSMUST00000194038 Dcaf11Q91VU6 549 aa17.83■□□□□ 0.44
Pcdha8-201ENSMUST00000194038 NgefQ8CHT1 710 aa17.82■□□□□ 0.44
Pcdha8-201ENSMUST00000194038 Cabp1Q9JLK7 227 aa17.8■□□□□ 0.44
Pcdha8-201ENSMUST00000194038 Cgnl1Q6AW69 1298 aa17.8■□□□□ 0.44
Pcdha8-201ENSMUST00000194038 Glipr1l2Q9CQ35 332 aa17.79■□□□□ 0.44
Pcdha8-201ENSMUST00000194038 Clstn1Q9EPL2 979 aa17.79■□□□□ 0.44
Pcdha8-201ENSMUST00000194038 Tpm3-rs7D3Z2H9 248 aa17.79■□□□□ 0.44
Pcdha8-201ENSMUST00000194038 Znf330Q922H9 316 aa17.79■□□□□ 0.44
Pcdha8-201ENSMUST00000194038 Ksr2Q3UVC0 959 aa17.79■□□□□ 0.44
Pcdha8-201ENSMUST00000194038 MecomP14404 1042 aa17.77■□□□□ 0.44
Pcdha8-201ENSMUST00000194038 Gpatch11Q3UFS4 262 aa17.77■□□□□ 0.43
Pcdha8-201ENSMUST00000194038 AampJ3QN89 436 aa17.75■□□□□ 0.43
Pcdha8-201ENSMUST00000194038 Srcin1Q9QWI6 1250 aa17.75■□□□□ 0.43
Pcdha8-201ENSMUST00000194038 Kdm5dQ62240 1548 aa17.74■□□□□ 0.43
Pcdha8-201ENSMUST00000194038 Fbxo2Q80UW2 297 aa17.73■□□□□ 0.43
Pcdha8-201ENSMUST00000194038 Q3TQI7 289 aaKnown RBP17.73■□□□□ 0.43
Pcdha8-201ENSMUST00000194038 Stard8Q8K031 1019 aa17.71■□□□□ 0.43
Pcdha8-201ENSMUST00000194038 St18Q80TY4 1045 aa17.71■□□□□ 0.43
Pcdha8-201ENSMUST00000194038 Sf3a1Q8K4Z5 791 aaKnown RBP17.71■□□□□ 0.43
Pcdha8-201ENSMUST00000194038 PrkcshO08795 521 aa17.7■□□□□ 0.42
Pcdha8-201ENSMUST00000194038 Spag9Q58A65 1321 aaKnown RBP17.7■□□□□ 0.42
Pcdha8-201ENSMUST00000194038 Pdcl3Q8BVF2 240 aa17.7■□□□□ 0.42
Pcdha8-201ENSMUST00000194038 Nup155Q99P88 1391 aaKnown RBP17.7■□□□□ 0.42
Pcdha8-201ENSMUST00000194038 Eif4g2Q62448 906 aaKnown RBP17.7■□□□□ 0.42
Pcdha8-201ENSMUST00000194038 Casq1O09165 405 aa17.7■□□□□ 0.42
Pcdha8-201ENSMUST00000194038 CrebrfQ8CDG5 640 aaKnown RBP17.69■□□□□ 0.42
Pcdha8-201ENSMUST00000194038 Slc4a1apE9PX68 744 aa17.69■□□□□ 0.42
Pcdha8-201ENSMUST00000194038 UacaQ8CGB3 1411 aa17.69■□□□□ 0.42
Pcdha8-201ENSMUST00000194038 Rock1P70335 1354 aa17.68■□□□□ 0.42
Pcdha8-201ENSMUST00000194038 Plekhh2Q8C115 1491 aa17.68■□□□□ 0.42
Pcdha8-201ENSMUST00000194038 Tpm3P21107 285 aaKnown RBP17.66■□□□□ 0.42
Retrieved 100 of 22,080 RNA–protein pairs in 26.4 ms