RNA–Protein interactions for RNA: ENSMUST00000176893.7

Bdnf-211, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,707 nt, Biotype protein coding, Subcellular localisation Dendrite .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-211ENSMUST00000176893 Pak3Q61036 559 aa10.29□□□□□ -0.76
Bdnf-211ENSMUST00000176893 Slc24a1Q91WD8 1130 aa10.29□□□□□ -0.76
Bdnf-211ENSMUST00000176893 Wwc1Q5SXA9 1104 aa10.29□□□□□ -0.76
Bdnf-211ENSMUST00000176893 Pds5bQ4VA53 1446 aaKnown RBP10.29□□□□□ -0.76
Bdnf-211ENSMUST00000176893 Kdm2aP59997 1161 aa10.28□□□□□ -0.76
Bdnf-211ENSMUST00000176893 Egfem1Q8C088 590 aa10.28□□□□□ -0.76
Bdnf-211ENSMUST00000176893 Mak16Q8BGS0 296 aaKnown RBP10.27□□□□□ -0.77
Bdnf-211ENSMUST00000176893 Chmp4bQ9D8B3 224 aaKnown RBP10.27□□□□□ -0.77
Bdnf-211ENSMUST00000176893 Ercc6F8VPZ5 1481 aa10.27□□□□□ -0.77
Bdnf-211ENSMUST00000176893 Skida1Q80YR3 822 aa10.27□□□□□ -0.77
Bdnf-211ENSMUST00000176893 DmtnQ9WV69 405 aa10.26□□□□□ -0.77
Bdnf-211ENSMUST00000176893 Rpap1Q80TE0 1409 aa10.26□□□□□ -0.77
Bdnf-211ENSMUST00000176893 Liat1Q810M6 228 aa10.25□□□□□ -0.77
Bdnf-211ENSMUST00000176893 WdpcpQ8C456 722 aa10.25□□□□□ -0.77
Bdnf-211ENSMUST00000176893 AU015836B2RUM3 263 aa10.24□□□□□ -0.77
Bdnf-211ENSMUST00000176893 Armcx1Q9CX83 456 aa10.24□□□□□ -0.77
Bdnf-211ENSMUST00000176893 Cdca7Q9D0M2 382 aa10.24□□□□□ -0.77
Bdnf-211ENSMUST00000176893 Washc2Q6PGL7 1334 aa10.21□□□□□ -0.77
Bdnf-211ENSMUST00000176893 IbspQ61711 324 aa10.21□□□□□ -0.78
Bdnf-211ENSMUST00000176893 Sh3bp5Q9Z131 463 aa10.21□□□□□ -0.78
Bdnf-211ENSMUST00000176893 Kcng1A2BDX4 514 aa10.2□□□□□ -0.78
Bdnf-211ENSMUST00000176893 Ppm1gQ61074 542 aa10.2□□□□□ -0.78
Bdnf-211ENSMUST00000176893 Gtf2a1Q99PM3 378 aa10.2□□□□□ -0.78
Bdnf-211ENSMUST00000176893 TprnA2AI08 749 aaKnown RBP10.19□□□□□ -0.78
Bdnf-211ENSMUST00000176893 Fam163aQ8CAA5 168 aa10.19□□□□□ -0.78
Bdnf-211ENSMUST00000176893 SetQ9EQU5 289 aaKnown RBP10.19□□□□□ -0.78
Bdnf-211ENSMUST00000176893 Mfap1aC0HKD8 439 aaKnown RBP10.18□□□□□ -0.78
Bdnf-211ENSMUST00000176893 Mfap1bC0HKD9 439 aaKnown RBP10.18□□□□□ -0.78
Bdnf-211ENSMUST00000176893 TraipQ8VIG6 470 aa10.18□□□□□ -0.78
Bdnf-211ENSMUST00000176893 BicraF8VPZ9 1578 aa10.18□□□□□ -0.78
Bdnf-211ENSMUST00000176893 Mkrn3Q60764 544 aa10.18□□□□□ -0.78
Bdnf-211ENSMUST00000176893 Rab11fip3Q8CHD8 1047 aa10.18□□□□□ -0.78
Bdnf-211ENSMUST00000176893 Exoc8Q6PGF7 716 aa10.17□□□□□ -0.78
Bdnf-211ENSMUST00000176893 Rrp9Q91WM3 475 aaKnown RBP10.17□□□□□ -0.78
Bdnf-211ENSMUST00000176893 Kdm4aQ8BW72 1064 aa10.17□□□□□ -0.78
Bdnf-211ENSMUST00000176893 Ccdc88bQ4QRL3 1481 aa10.16□□□□□ -0.78
Bdnf-211ENSMUST00000176893 Tnnt2P50752 301 aa10.15□□□□□ -0.78
Bdnf-211ENSMUST00000176893 NgefQ8CHT1 710 aa10.15□□□□□ -0.78
Bdnf-211ENSMUST00000176893 Cecr2E9Q2Z1 1453 aa10.15□□□□□ -0.78
Bdnf-211ENSMUST00000176893 Baz1aO88379 1555 aa10.15□□□□□ -0.78
Bdnf-211ENSMUST00000176893 Ccer2J3QPU5 274 aa10.15□□□□□ -0.79
Bdnf-211ENSMUST00000176893 Fam43aQ8BUP8 424 aa10.15□□□□□ -0.79
Bdnf-211ENSMUST00000176893 Brpf1B2RRD7 1212 aa10.14□□□□□ -0.79
Bdnf-211ENSMUST00000176893 Ggt6Q6PDE7 497 aa10.14□□□□□ -0.79
Bdnf-211ENSMUST00000176893 MccE9PWI3 1003 aa10.14□□□□□ -0.79
Bdnf-211ENSMUST00000176893 Chrna2Q91X60 512 aa10.12□□□□□ -0.79
Bdnf-211ENSMUST00000176893 Lmod3E9QA62 571 aa10.12□□□□□ -0.79
Bdnf-211ENSMUST00000176893 Ipo9Q91YE6 1041 aa10.12□□□□□ -0.79
Bdnf-211ENSMUST00000176893 Ncapd3Q6ZQK0 1506 aa10.1□□□□□ -0.79
Bdnf-211ENSMUST00000176893 Fkbp15Q6P9Q6 1216 aaKnown RBP10.1□□□□□ -0.79
Bdnf-211ENSMUST00000176893 Mtmr7Q9Z2C9 660 aa10.1□□□□□ -0.79
Bdnf-211ENSMUST00000176893 Atad2bE9Q166 1460 aaKnown RBP10.1□□□□□ -0.79
Bdnf-211ENSMUST00000176893 Kif15Q6P9L6 1387 aa10.09□□□□□ -0.79
Bdnf-211ENSMUST00000176893 Themis2Q91YX0 663 aa10.08□□□□□ -0.8
Bdnf-211ENSMUST00000176893 E2f4Q8R0K9 410 aa10.07□□□□□ -0.8
Bdnf-211ENSMUST00000176893 Iqcf3Q9D498 203 aa10.07□□□□□ -0.8
Bdnf-211ENSMUST00000176893 Znf704Q9ERQ3 566 aa10.07□□□□□ -0.8
Bdnf-211ENSMUST00000176893 Kdm5bQ80Y84 1544 aa10.06□□□□□ -0.8
Bdnf-211ENSMUST00000176893 Clstn1Q9EPL2 979 aa10.05□□□□□ -0.8
Bdnf-211ENSMUST00000176893 Znf526Q8BI66 675 aa10.05□□□□□ -0.8
Bdnf-211ENSMUST00000176893 Sox12Q04890 314 aa10.04□□□□□ -0.8
Bdnf-211ENSMUST00000176893 Rsph6aQ8CDR2 708 aa10.04□□□□□ -0.8
Bdnf-211ENSMUST00000176893 Phldb1Q6PDH0 1371 aaKnown RBP10.03□□□□□ -0.8
Bdnf-211ENSMUST00000176893 CanxP35564 591 aaKnown RBP10.03□□□□□ -0.8
Bdnf-211ENSMUST00000176893 Smarca2Q6DIC0 1577 aa10.02□□□□□ -0.81
Bdnf-211ENSMUST00000176893 Ncoa4Q5U4H9 625 aa10.02□□□□□ -0.81
Bdnf-211ENSMUST00000176893 Ccdc85aQ5SP85 500 aa10.02□□□□□ -0.81
Bdnf-211ENSMUST00000176893 Safb2Q80YR5 991 aaKnown RBP10.02□□□□□ -0.81
Bdnf-211ENSMUST00000176893 Klhl34A2AI76 644 aa10□□□□□ -0.81
Bdnf-211ENSMUST00000176893 Cc2d2aQ8CFW7 1633 aa9.99□□□□□ -0.81
Bdnf-211ENSMUST00000176893 Brd4Q9ESU6 1400 aaKnown RBP9.97□□□□□ -0.81
Bdnf-211ENSMUST00000176893 Neurod2Q62414 383 aa9.96□□□□□ -0.81
Bdnf-211ENSMUST00000176893 Klf15Q9EPW2 415 aa9.96□□□□□ -0.81
Bdnf-211ENSMUST00000176893 Slc4a3P16283 1227 aa9.95□□□□□ -0.82
Bdnf-211ENSMUST00000176893 Eid3Q3V124 375 aa9.95□□□□□ -0.82
Bdnf-211ENSMUST00000176893 Rbm27Q5SFM8 1060 aaKnown RBP9.95□□□□□ -0.82
Bdnf-211ENSMUST00000176893 Ssr1Q9CY50 286 aaKnown RBP9.95□□□□□ -0.82
Bdnf-211ENSMUST00000176893 1700122O11RikJ3QPW6 241 aa9.95□□□□□ -0.82
Bdnf-211ENSMUST00000176893 VaspP70460 375 aaKnown RBP9.95□□□□□ -0.82
Bdnf-211ENSMUST00000176893 Hdac6Q9Z2V5 1149 aa9.95□□□□□ -0.82
Bdnf-211ENSMUST00000176893 MafgO54790 162 aa9.94□□□□□ -0.82
Bdnf-211ENSMUST00000176893 Arhgap27A2AB59 869 aa9.94□□□□□ -0.82
Bdnf-211ENSMUST00000176893 ChgaP26339 463 aaKnown RBP9.94□□□□□ -0.82
Bdnf-211ENSMUST00000176893 Dusp27Q148W8 1138 aa9.93□□□□□ -0.82
Bdnf-211ENSMUST00000176893 Fbxo2Q80UW2 297 aa9.93□□□□□ -0.82
Bdnf-211ENSMUST00000176893 Cwc22Q8C5N3 908 aaKnown RBP9.93□□□□□ -0.82
Bdnf-211ENSMUST00000176893 Cux2P70298 1426 aa9.93□□□□□ -0.82
Bdnf-211ENSMUST00000176893 Rrp12Q6P5B0 1295 aaKnown RBP9.92□□□□□ -0.82
Bdnf-211ENSMUST00000176893 Rapgef2Q8CHG7 1496 aa9.92□□□□□ -0.82
Bdnf-211ENSMUST00000176893 Hap1O35668 628 aa9.92□□□□□ -0.82
Bdnf-211ENSMUST00000176893 Chrm1P12657 460 aa9.92□□□□□ -0.82
Bdnf-211ENSMUST00000176893 Iqgap2Q3UQ44 1575 aa9.91□□□□□ -0.82
Bdnf-211ENSMUST00000176893 Tmco4Q91WU4 631 aa9.91□□□□□ -0.82
Bdnf-211ENSMUST00000176893 Smg6P61406 1418 aaKnown RBP9.9□□□□□ -0.82
Bdnf-211ENSMUST00000176893 Golga3P55937 1487 aa9.9□□□□□ -0.83
Bdnf-211ENSMUST00000176893 Smarca4Q3TKT4 1613 aaKnown RBP9.89□□□□□ -0.83
Bdnf-211ENSMUST00000176893 FosbP13346 338 aa9.88□□□□□ -0.83
Bdnf-211ENSMUST00000176893 Trim44Q9QXA7 346 aa9.88□□□□□ -0.83
Bdnf-211ENSMUST00000176893 Apbb1Q9QXJ1 710 aa9.87□□□□□ -0.83
Bdnf-211ENSMUST00000176893 Top2bQ64511 1612 aa9.87□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 14.8 ms