RNA–Protein interactions for RNA: ENSMUST00000176893.7

Bdnf-211, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,707 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-211ENSMUST00000176893 Ube2uB1AUC4 352 aa14.36□□□□□ -0.11
Bdnf-211ENSMUST00000176893 DiexfQ8BTT6 772 aaKnown RBP13.91□□□□□ -0.18
Bdnf-211ENSMUST00000176893 Ttbk1Q6PCN3 1308 aa13.73□□□□□ -0.21
Bdnf-211ENSMUST00000176893 Ehmt2Q9Z148 1263 aaKnown RBP13.48□□□□□ -0.25
Bdnf-211ENSMUST00000176893 Rhox8Q6VSS7 320 aa13.28□□□□□ -0.28
Bdnf-211ENSMUST00000176893 CatipB9EKE5 520 aa13.11□□□□□ -0.31
Bdnf-211ENSMUST00000176893 Amer1Q7TS75 1132 aa13.04□□□□□ -0.32
Bdnf-211ENSMUST00000176893 Plppr3Q7TPB0 716 aa13.01□□□□□ -0.33
Bdnf-211ENSMUST00000176893 ArxO35085 564 aa13.01□□□□□ -0.33
Bdnf-211ENSMUST00000176893 Rpgrip1Q9EPQ2 1331 aa12.93□□□□□ -0.34
Bdnf-211ENSMUST00000176893 Bcl11aQ9QYE3 773 aa12.57□□□□□ -0.4
Bdnf-211ENSMUST00000176893 Las1lA2BE28 776 aaKnown RBP12.51□□□□□ -0.41
Bdnf-211ENSMUST00000176893 Ppargc1bQ8VHJ7 1014 aa12.46□□□□□ -0.41
Bdnf-211ENSMUST00000176893 Myt1Q8CFC2 1127 aa12.43□□□□□ -0.42
Bdnf-211ENSMUST00000176893 Arid3aQ62431 601 aa12.41□□□□□ -0.42
Bdnf-211ENSMUST00000176893 Pcgf6Q99NA9 353 aa12.38□□□□□ -0.43
Bdnf-211ENSMUST00000176893 Q8BT18 775 aa12.38□□□□□ -0.43
Bdnf-211ENSMUST00000176893 CenpbP27790 599 aa12.35□□□□□ -0.43
Bdnf-211ENSMUST00000176893 Slc4a1apE9PX68 744 aa12.28□□□□□ -0.44
Bdnf-211ENSMUST00000176893 Kcna4Q61423 654 aa12.27□□□□□ -0.44
Bdnf-211ENSMUST00000176893 Acin1Q9JIX8 1338 aaKnown RBP12.26□□□□□ -0.45
Bdnf-211ENSMUST00000176893 UbtfP25976 765 aaKnown RBP12.22□□□□□ -0.45
Bdnf-211ENSMUST00000176893 Aplp2Q06335 707 aa12.11□□□□□ -0.47
Bdnf-211ENSMUST00000176893 Rtl1Q7M732 1744 aa12.05□□□□□ -0.48
Bdnf-211ENSMUST00000176893 Gtf3c5Q8R2T8 520 aa12.01□□□□□ -0.49
Bdnf-211ENSMUST00000176893 Abcc9P70170 1546 aa12□□□□□ -0.49
Bdnf-211ENSMUST00000176893 Taok2Q6ZQ29 1240 aa11.99□□□□□ -0.49
Bdnf-211ENSMUST00000176893 Prdm10Q3UTQ7 1184 aa11.99□□□□□ -0.49
Bdnf-211ENSMUST00000176893 Ccdc180J3QNE4 1664 aa11.99□□□□□ -0.49
Bdnf-211ENSMUST00000176893 NischQ80TM9 1593 aa11.98□□□□□ -0.49
Bdnf-211ENSMUST00000176893 Eif5bQ05D44 1216 aaKnown RBP11.96□□□□□ -0.5
Bdnf-211ENSMUST00000176893 Neurod1Q60867 357 aa11.95□□□□□ -0.5
Bdnf-211ENSMUST00000176893 BccipQ9CWI3 316 aa11.91□□□□□ -0.5
Bdnf-211ENSMUST00000176893 Ncbp3Q8BZR9 615 aaKnown RBP11.91□□□□□ -0.5
Bdnf-211ENSMUST00000176893 Vsig10D3YX43 558 aa11.89□□□□□ -0.51
Bdnf-211ENSMUST00000176893 Cngb1E1AZ71 1325 aa11.87□□□□□ -0.51
Bdnf-211ENSMUST00000176893 Trim41Q5NCC3 630 aa11.86□□□□□ -0.51
Bdnf-211ENSMUST00000176893 Prdm16A2A935 1275 aa11.84□□□□□ -0.51
Bdnf-211ENSMUST00000176893 Mapk8ip2Q9ERE9 830 aa11.83□□□□□ -0.52
Bdnf-211ENSMUST00000176893 Supt5hO55201 1082 aaKnown RBP11.82□□□□□ -0.52
Bdnf-211ENSMUST00000176893 4930567H17RikQ3V0K5 233 aa11.8□□□□□ -0.52
Bdnf-211ENSMUST00000176893 Pelp1Q9DBD5 1123 aaKnown RBP11.8□□□□□ -0.52
Bdnf-211ENSMUST00000176893 TimelessQ9R1X4 1197 aa11.8□□□□□ -0.52
Bdnf-211ENSMUST00000176893 1700123L14RikQ3V2K7 440 aa11.78□□□□□ -0.52
Bdnf-211ENSMUST00000176893 Ripply1Q2WG77 201 aa11.76□□□□□ -0.53
Bdnf-211ENSMUST00000176893 Rsph4aQ8BYM7 716 aa11.76□□□□□ -0.53
Bdnf-211ENSMUST00000176893 Gm35339A0A140LHH9 1649 aa11.74□□□□□ -0.53
Bdnf-211ENSMUST00000176893 PrkcshO08795 521 aa11.73□□□□□ -0.53
Bdnf-211ENSMUST00000176893 Dcaf1Q80TR8 1506 aa11.67□□□□□ -0.54
Bdnf-211ENSMUST00000176893 Fam71e1A1L3C1 212 aa11.64□□□□□ -0.55
Bdnf-211ENSMUST00000176893 Npm2Q80W85 207 aa11.6□□□□□ -0.55
Bdnf-211ENSMUST00000176893 Znf326O88291 580 aa11.6□□□□□ -0.55
Bdnf-211ENSMUST00000176893 Csrnp3P59055 597 aa11.57□□□□□ -0.56
Bdnf-211ENSMUST00000176893 Pknox2Q8BG99 474 aa11.56□□□□□ -0.56
Bdnf-211ENSMUST00000176893 HrcG5E8J6 738 aa11.53□□□□□ -0.56
Bdnf-211ENSMUST00000176893 Zcchc6Q5BLK4 1491 aaKnown RBP11.52□□□□□ -0.57
Bdnf-211ENSMUST00000176893 Gm38655A0A286YDK6 273 aa11.51□□□□□ -0.57
Bdnf-211ENSMUST00000176893 Os9Q8K2C7 672 aa11.5□□□□□ -0.57
Bdnf-211ENSMUST00000176893 Zbtb7cQ8VCZ7 619 aa11.5□□□□□ -0.57
Bdnf-211ENSMUST00000176893 Znf316Q6PGE4 1016 aa11.48□□□□□ -0.57
Bdnf-211ENSMUST00000176893 Anks4bQ8K3X6 423 aa11.47□□□□□ -0.57
Bdnf-211ENSMUST00000176893 Zeb1Q64318 1117 aa11.43□□□□□ -0.58
Bdnf-211ENSMUST00000176893 Ecm2Q5FW85 670 aa11.43□□□□□ -0.58
Bdnf-211ENSMUST00000176893 Cdk11bP24788 784 aaKnown RBP11.41□□□□□ -0.58
Bdnf-211ENSMUST00000176893 Chic1Q8CBW7 227 aa11.38□□□□□ -0.59
Bdnf-211ENSMUST00000176893 Esf1Q3V1V3 845 aaKnown RBP11.35□□□□□ -0.59
Bdnf-211ENSMUST00000176893 Plcd4Q8K3R3 807 aa11.34□□□□□ -0.59
Bdnf-211ENSMUST00000176893 Abcc8B2RUS7 1588 aa11.34□□□□□ -0.59
Bdnf-211ENSMUST00000176893 Ube2q2Q8K2Z8 378 aa11.32□□□□□ -0.6
Bdnf-211ENSMUST00000176893 NefmP08553 848 aa11.32□□□□□ -0.6
Bdnf-211ENSMUST00000176893 Podxl2Q8CAE9 603 aa11.31□□□□□ -0.6
Bdnf-211ENSMUST00000176893 Fbxo3Q9DC63 480 aa11.28□□□□□ -0.6
Bdnf-211ENSMUST00000176893 Rangap1P46061 589 aaKnown RBP11.26□□□□□ -0.61
Bdnf-211ENSMUST00000176893 Sall2Q9QX96 1004 aa11.25□□□□□ -0.61
Bdnf-211ENSMUST00000176893 NclP09405 707 aaKnown RBP11.24□□□□□ -0.61
Bdnf-211ENSMUST00000176893 Irx6Q9ER75 438 aa11.23□□□□□ -0.61
Bdnf-211ENSMUST00000176893 Samd1D3YXK1 519 aa11.18□□□□□ -0.62
Bdnf-211ENSMUST00000176893 AcrbpQ3V140 540 aa11.17□□□□□ -0.62
Bdnf-211ENSMUST00000176893 NrdcQ8BHG1 1161 aa11.17□□□□□ -0.62
Bdnf-211ENSMUST00000176893 Ifnlr1Q8CGK5 535 aa11.17□□□□□ -0.62
Bdnf-211ENSMUST00000176893 Arid4bA2CG63 1314 aaKnown RBP11.16□□□□□ -0.62
Bdnf-211ENSMUST00000176893 Wdr66E9Q743 1299 aa11.16□□□□□ -0.62
Bdnf-211ENSMUST00000176893 Skap1Q3UUV5 355 aa11.15□□□□□ -0.62
Bdnf-211ENSMUST00000176893 Scaf1Q5U4C3 1256 aaKnown RBP11.13□□□□□ -0.63
Bdnf-211ENSMUST00000176893 Rtl5Q5DTT4 599 aa11.12□□□□□ -0.63
Bdnf-211ENSMUST00000176893 Nop58Q6DFW4 536 aaKnown RBP11.09□□□□□ -0.63
Bdnf-211ENSMUST00000176893 Gtf3c3Q3TMP1 882 aa11.08□□□□□ -0.64
Bdnf-211ENSMUST00000176893 Igsf3Q6ZQA6 1194 aa11.08□□□□□ -0.64
Bdnf-211ENSMUST00000176893 Tshz2Q68FE9 1030 aa11.07□□□□□ -0.64
Bdnf-211ENSMUST00000176893 4933416C03RikQ3V063 378 aa11.04□□□□□ -0.64
Bdnf-211ENSMUST00000176893 Ccdc136Q3TVA9 1136 aa11.04□□□□□ -0.64
Bdnf-211ENSMUST00000176893 DaxxO35613 739 aa11.03□□□□□ -0.64
Bdnf-211ENSMUST00000176893 Fgd1P52734 960 aa11.02□□□□□ -0.65
Bdnf-211ENSMUST00000176893 Cers3Q1A3B0 383 aa11.01□□□□□ -0.65
Bdnf-211ENSMUST00000176893 Kiaa1211Q5PR69 1207 aa11□□□□□ -0.65
Bdnf-211ENSMUST00000176893 Hdac5Q9Z2V6 1113 aa10.99□□□□□ -0.65
Bdnf-211ENSMUST00000176893 MyclP10166 368 aa10.98□□□□□ -0.65
Bdnf-211ENSMUST00000176893 Anp32bQ9EST5 272 aaKnown RBP10.98□□□□□ -0.65
Bdnf-211ENSMUST00000176893 Ciz1Q8VEH2 845 aa10.97□□□□□ -0.65
Bdnf-211ENSMUST00000176893 Gm13697A2AK42 830 aa10.94□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 29.7 ms