Protein–RNA interactions for Protein: Q91WU4

Tmco4, Transmembrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmco4Q91WU4 Gm25239-201ENSMUST00000174915 86 ntBASIC43.02■■■■■ 4.48
Tmco4Q91WU4 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC39.87■■■■□ 3.97
Tmco4Q91WU4 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC39.19■■■■□ 3.86
Tmco4Q91WU4 Gm15042-201ENSMUST00000120212 883 ntBASIC37.42■■■■□ 3.58
Tmco4Q91WU4 Gm24109-201ENSMUST00000175489 103 ntBASIC37.42■■■■□ 3.58
Tmco4Q91WU4 Gm15045-201ENSMUST00000117359 883 ntBASIC36.66■■■■□ 3.46
Tmco4Q91WU4 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC36.32■■■■□ 3.4
Tmco4Q91WU4 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC36.29■■■■□ 3.4
Tmco4Q91WU4 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC36.27■■■■□ 3.4
Tmco4Q91WU4 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC35.95■■■■□ 3.35
Tmco4Q91WU4 Gm23366-201ENSMUST00000175022 89 ntBASIC35.83■■■■□ 3.33
Tmco4Q91WU4 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC35.76■■■■□ 3.32
Tmco4Q91WU4 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC35.69■■■■□ 3.3
Tmco4Q91WU4 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC35.09■■■■□ 3.21
Tmco4Q91WU4 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC34.95■■■■□ 3.19
Tmco4Q91WU4 AC153911.1-202ENSMUST00000218534 1034 ntBASIC34.91■■■■□ 3.18
Tmco4Q91WU4 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC34.68■■■■□ 3.14
Tmco4Q91WU4 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC34.55■■■■□ 3.12
Tmco4Q91WU4 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC34.46■■■■□ 3.11
Tmco4Q91WU4 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
Tmco4Q91WU4 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC34.41■■■■□ 3.1
Tmco4Q91WU4 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
Tmco4Q91WU4 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC34.36■■■■□ 3.09
Tmco4Q91WU4 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
Tmco4Q91WU4 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC34.17■■■■□ 3.06
Tmco4Q91WU4 Gm25238-201ENSMUST00000174914 89 ntBASIC34.06■■■■□ 3.04
Tmco4Q91WU4 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC34.05■■■■□ 3.04
Tmco4Q91WU4 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC34.01■■■■□ 3.03
Tmco4Q91WU4 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC34■■■■□ 3.03
Tmco4Q91WU4 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC33.97■■■■□ 3.03
Tmco4Q91WU4 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC33.93■■■■□ 3.02
Tmco4Q91WU4 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC33.88■■■■□ 3.01
Tmco4Q91WU4 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC33.71■■■□□ 2.99
Tmco4Q91WU4 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC33.61■■■□□ 2.97
Tmco4Q91WU4 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC33.57■■■□□ 2.96
Tmco4Q91WU4 Psd-208ENSMUST00000224556 2034 ntBASIC33.32■■■□□ 2.92
Tmco4Q91WU4 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC33.31■■■□□ 2.92
Tmco4Q91WU4 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC33.25■■■□□ 2.91
Tmco4Q91WU4 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
Tmco4Q91WU4 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC33.03■■■□□ 2.88
Tmco4Q91WU4 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
Tmco4Q91WU4 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC32.97■■■□□ 2.87
Tmco4Q91WU4 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC32.87■■■□□ 2.85
Tmco4Q91WU4 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC32.83■■■□□ 2.85
Tmco4Q91WU4 Gm27325-201ENSMUST00000175467 74 ntBASIC32.79■■■□□ 2.84
Tmco4Q91WU4 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
Tmco4Q91WU4 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC32.7■■■□□ 2.82
Tmco4Q91WU4 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC32.6■■■□□ 2.81
Tmco4Q91WU4 Gm25262-201ENSMUST00000174934 133 ntBASIC32.55■■■□□ 2.8
Tmco4Q91WU4 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Tmco4Q91WU4 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
Tmco4Q91WU4 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
Tmco4Q91WU4 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC32.29■■■□□ 2.76
Tmco4Q91WU4 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC32.25■■■□□ 2.75
Tmco4Q91WU4 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC32.25■■■□□ 2.75
Tmco4Q91WU4 Rab21-202ENSMUST00000218831 843 ntBASIC32.24■■■□□ 2.75
Tmco4Q91WU4 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Tmco4Q91WU4 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC32.2■■■□□ 2.75
Tmco4Q91WU4 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC32.15■■■□□ 2.74
Tmco4Q91WU4 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Tmco4Q91WU4 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC32.09■■■□□ 2.73
Tmco4Q91WU4 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC32.04■■■□□ 2.72
Tmco4Q91WU4 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC31.98■■■□□ 2.71
Tmco4Q91WU4 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
Tmco4Q91WU4 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC31.96■■■□□ 2.71
Tmco4Q91WU4 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC31.95■■■□□ 2.71
Tmco4Q91WU4 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
Tmco4Q91WU4 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Tmco4Q91WU4 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Tmco4Q91WU4 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC31.88■■■□□ 2.69
Tmco4Q91WU4 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC31.8■■■□□ 2.68
Tmco4Q91WU4 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
Tmco4Q91WU4 Gm26115-201ENSMUST00000175605 87 ntBASIC31.79■■■□□ 2.68
Tmco4Q91WU4 Gm8109-201ENSMUST00000194076 746 ntBASIC31.69■■■□□ 2.66
Tmco4Q91WU4 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Tmco4Q91WU4 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Tmco4Q91WU4 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Tmco4Q91WU4 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Tmco4Q91WU4 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC31.63■■■□□ 2.65
Tmco4Q91WU4 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
Tmco4Q91WU4 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC31.58■■■□□ 2.65
Tmco4Q91WU4 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC31.56■■■□□ 2.64
Tmco4Q91WU4 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC31.54■■■□□ 2.64
Tmco4Q91WU4 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Tmco4Q91WU4 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC31.47■■■□□ 2.63
Tmco4Q91WU4 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC31.46■■■□□ 2.63
Tmco4Q91WU4 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC31.45■■■□□ 2.63
Tmco4Q91WU4 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC31.41■■■□□ 2.62
Tmco4Q91WU4 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Tmco4Q91WU4 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC31.39■■■□□ 2.62
Tmco4Q91WU4 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Tmco4Q91WU4 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Tmco4Q91WU4 Gm10524-201ENSMUST00000181931 1893 ntBASIC31.25■■■□□ 2.59
Tmco4Q91WU4 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
Tmco4Q91WU4 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC31.23■■■□□ 2.59
Tmco4Q91WU4 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC31.2■■■□□ 2.58
Tmco4Q91WU4 Gm42596-201ENSMUST00000196305 1958 ntBASIC31.17■■■□□ 2.58
Tmco4Q91WU4 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Tmco4Q91WU4 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Tmco4Q91WU4 Gm17082-201ENSMUST00000166043 1091 ntBASIC31.16■■■□□ 2.58
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms