Protein–RNA interactions for Protein: Q5SFM8

Rbm27, RNA-binding protein 27, mousemouse

Known RBP Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm27Q5SFM8 Gm25239-201ENSMUST00000174915 86 ntBASIC46.7■■■■■ 5.07
Rbm27Q5SFM8 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC43.03■■■■■ 4.48
Rbm27Q5SFM8 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC42.52■■■■■ 4.4
Rbm27Q5SFM8 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC41.28■■■■■ 4.2
Rbm27Q5SFM8 Gm15042-201ENSMUST00000120212 883 ntBASIC41.1■■■■■ 4.17
Rbm27Q5SFM8 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC40.5■■■■■ 4.07
Rbm27Q5SFM8 Gm24109-201ENSMUST00000175489 103 ntBASIC40.34■■■■■ 4.05
Rbm27Q5SFM8 Gm15045-201ENSMUST00000117359 883 ntBASIC40.23■■■■■ 4.03
Rbm27Q5SFM8 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC40.01■■■■■ 4
Rbm27Q5SFM8 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC39.77■■■■□ 3.96
Rbm27Q5SFM8 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC39.43■■■■□ 3.9
Rbm27Q5SFM8 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC39.16■■■■□ 3.86
Rbm27Q5SFM8 Gm23366-201ENSMUST00000175022 89 ntBASIC39.08■■■■□ 3.85
Rbm27Q5SFM8 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC38.92■■■■□ 3.82
Rbm27Q5SFM8 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC38.85■■■■□ 3.81
Rbm27Q5SFM8 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC38.53■■■■□ 3.76
Rbm27Q5SFM8 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC38.34■■■■□ 3.73
Rbm27Q5SFM8 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC38.22■■■■□ 3.71
Rbm27Q5SFM8 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC38.17■■■■□ 3.7
Rbm27Q5SFM8 Psd-208ENSMUST00000224556 2034 ntBASIC38.1■■■■□ 3.69
Rbm27Q5SFM8 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC38.07■■■■□ 3.69
Rbm27Q5SFM8 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC37.97■■■■□ 3.67
Rbm27Q5SFM8 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC37.93■■■■□ 3.66
Rbm27Q5SFM8 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC37.82■■■■□ 3.64
Rbm27Q5SFM8 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC37.8■■■■□ 3.64
Rbm27Q5SFM8 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC37.78■■■■□ 3.64
Rbm27Q5SFM8 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC37.71■■■■□ 3.63
Rbm27Q5SFM8 AC153911.1-202ENSMUST00000218534 1034 ntBASIC37.66■■■■□ 3.62
Rbm27Q5SFM8 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC37.55■■■■□ 3.6
Rbm27Q5SFM8 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC37.29■■■■□ 3.56
Rbm27Q5SFM8 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC37.28■■■■□ 3.56
Rbm27Q5SFM8 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC37.13■■■■□ 3.53
Rbm27Q5SFM8 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC37.11■■■■□ 3.53
Rbm27Q5SFM8 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC37.06■■■■□ 3.52
Rbm27Q5SFM8 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC36.99■■■■□ 3.51
Rbm27Q5SFM8 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC36.95■■■■□ 3.5
Rbm27Q5SFM8 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC36.91■■■■□ 3.5
Rbm27Q5SFM8 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC36.85■■■■□ 3.49
Rbm27Q5SFM8 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC36.81■■■■□ 3.48
Rbm27Q5SFM8 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC36.77■■■■□ 3.48
Rbm27Q5SFM8 Gm25238-201ENSMUST00000174914 89 ntBASIC36.76■■■■□ 3.48
Rbm27Q5SFM8 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC36.76■■■■□ 3.47
Rbm27Q5SFM8 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC36.61■■■■□ 3.45
Rbm27Q5SFM8 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC36.49■■■■□ 3.43
Rbm27Q5SFM8 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC36.32■■■■□ 3.4
Rbm27Q5SFM8 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC36.3■■■■□ 3.4
Rbm27Q5SFM8 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC36.24■■■■□ 3.39
Rbm27Q5SFM8 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC36.21■■■■□ 3.39
Rbm27Q5SFM8 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC36.17■■■■□ 3.38
Rbm27Q5SFM8 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC36.16■■■■□ 3.38
Rbm27Q5SFM8 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC36.1■■■■□ 3.37
Rbm27Q5SFM8 Gm27325-201ENSMUST00000175467 74 ntBASIC36.09■■■■□ 3.37
Rbm27Q5SFM8 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC36.03■■■■□ 3.36
Rbm27Q5SFM8 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC36.02■■■■□ 3.36
Rbm27Q5SFM8 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC35.81■■■■□ 3.32
Rbm27Q5SFM8 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC35.81■■■■□ 3.32
Rbm27Q5SFM8 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC35.8■■■■□ 3.32
Rbm27Q5SFM8 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC35.76■■■■□ 3.32
Rbm27Q5SFM8 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC35.72■■■■□ 3.31
Rbm27Q5SFM8 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC35.67■■■■□ 3.3
Rbm27Q5SFM8 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC35.63■■■■□ 3.29
Rbm27Q5SFM8 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC35.61■■■■□ 3.29
Rbm27Q5SFM8 Gm10524-201ENSMUST00000181931 1893 ntBASIC35.6■■■■□ 3.29
Rbm27Q5SFM8 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC35.56■■■■□ 3.28
Rbm27Q5SFM8 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC35.55■■■■□ 3.28
Rbm27Q5SFM8 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
Rbm27Q5SFM8 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC35.46■■■■□ 3.27
Rbm27Q5SFM8 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC35.46■■■■□ 3.27
Rbm27Q5SFM8 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC35.45■■■■□ 3.27
Rbm27Q5SFM8 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC35.4■■■■□ 3.26
Rbm27Q5SFM8 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC35.4■■■■□ 3.26
Rbm27Q5SFM8 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC35.4■■■■□ 3.26
Rbm27Q5SFM8 Rab21-202ENSMUST00000218831 843 ntBASIC35.27■■■■□ 3.24
Rbm27Q5SFM8 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC35.26■■■■□ 3.24
Rbm27Q5SFM8 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC35.18■■■■□ 3.22
Rbm27Q5SFM8 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC35.15■■■■□ 3.22
Rbm27Q5SFM8 Gm25262-201ENSMUST00000174934 133 ntBASIC35.12■■■■□ 3.21
Rbm27Q5SFM8 CT025624.2-201ENSMUST00000223609 1909 ntBASIC35.11■■■■□ 3.21
Rbm27Q5SFM8 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC35.11■■■■□ 3.21
Rbm27Q5SFM8 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC35.07■■■■□ 3.21
Rbm27Q5SFM8 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC35.03■■■■□ 3.2
Rbm27Q5SFM8 Gm42596-201ENSMUST00000196305 1958 ntBASIC35■■■■□ 3.19
Rbm27Q5SFM8 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC34.91■■■■□ 3.18
Rbm27Q5SFM8 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
Rbm27Q5SFM8 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC34.85■■■■□ 3.17
Rbm27Q5SFM8 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC34.83■■■■□ 3.17
Rbm27Q5SFM8 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
Rbm27Q5SFM8 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC34.77■■■■□ 3.16
Rbm27Q5SFM8 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC34.74■■■■□ 3.15
Rbm27Q5SFM8 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC34.71■■■■□ 3.15
Rbm27Q5SFM8 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC34.69■■■■□ 3.14
Rbm27Q5SFM8 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC34.65■■■■□ 3.14
Rbm27Q5SFM8 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC34.6■■■■□ 3.13
Rbm27Q5SFM8 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
Rbm27Q5SFM8 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC34.53■■■■□ 3.12
Rbm27Q5SFM8 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
Rbm27Q5SFM8 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC34.46■■■■□ 3.11
Rbm27Q5SFM8 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC34.45■■■■□ 3.11
Rbm27Q5SFM8 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.1
Rbm27Q5SFM8 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC34.41■■■■□ 3.1
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms