RNA–Protein interactions for RNA: ENSMUST00000176172.7

Cux1-206, Transcript of Homeobox protein cut-like 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Cux1, Length 4,882 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1-206ENSMUST00000176172 Armcx1Q9CX83 456 aa21.46■■□□□ 1.03
Cux1-206ENSMUST00000176172 HnrnpuQ8VEK3 800 aaKnown RBP21.45■■□□□ 1.02
Cux1-206ENSMUST00000176172 Crybg2B7ZCC2 1516 aa21.45■■□□□ 1.02
Cux1-206ENSMUST00000176172 Speer4f1Q9D5Q6 258 aa21.45■■□□□ 1.02
Cux1-206ENSMUST00000176172 CftrP26361 1476 aa21.44■■□□□ 1.02
Cux1-206ENSMUST00000176172 Baz1bQ9Z277 1479 aa21.44■■□□□ 1.02
Cux1-206ENSMUST00000176172 Ppp1r18Q8BQ30 594 aa21.44■■□□□ 1.02
Cux1-206ENSMUST00000176172 Chmp5Q9D7S9 219 aa21.44■■□□□ 1.02
Cux1-206ENSMUST00000176172 Mak16Q8BGS0 296 aaKnown RBP21.44■■□□□ 1.02
Cux1-206ENSMUST00000176172 Sycp2Q9CUU3 1500 aa21.44■■□□□ 1.02
Cux1-206ENSMUST00000176172 Cux2P70298 1426 aa21.44■■□□□ 1.02
Cux1-206ENSMUST00000176172 SafbD3YXK2 937 aaKnown RBP21.43■■□□□ 1.02
Cux1-206ENSMUST00000176172 Hsp90b1P08113 802 aaKnown RBP21.43■■□□□ 1.02
Cux1-206ENSMUST00000176172 Dhx57Q6P5D3 1388 aaKnown RBP21.42■■□□□ 1.02
Cux1-206ENSMUST00000176172 Pes1Q9EQ61 584 aaKnown RBP21.42■■□□□ 1.02
Cux1-206ENSMUST00000176172 Rtn4Q99P72 1162 aaKnown RBP21.41■■□□□ 1.02
Cux1-206ENSMUST00000176172 Carmil1Q6EDY6 1374 aa21.39■■□□□ 1.02
Cux1-206ENSMUST00000176172 Casc1Q6TDU8 730 aa21.39■■□□□ 1.01
Cux1-206ENSMUST00000176172 Rtf1A2AQ19 715 aaKnown RBP21.38■■□□□ 1.01
Cux1-206ENSMUST00000176172 Stk26Q99JT2 416 aa21.38■■□□□ 1.01
Cux1-206ENSMUST00000176172 U2af1Q9D883 239 aaKnown RBP21.38■■□□□ 1.01
Cux1-206ENSMUST00000176172 PnnO35691 725 aaKnown RBP21.37■■□□□ 1.01
Cux1-206ENSMUST00000176172 Srcin1Q9QWI6 1250 aa21.36■■□□□ 1.01
Cux1-206ENSMUST00000176172 Slc4a3P16283 1227 aa21.36■■□□□ 1.01
Cux1-206ENSMUST00000176172 Supt16hQ920B9 1047 aa21.36■■□□□ 1.01
Cux1-206ENSMUST00000176172 MccE9PWI3 1003 aa21.35■■□□□ 1.01
Cux1-206ENSMUST00000176172 Nup155Q99P88 1391 aaKnown RBP21.34■■□□□ 1.01
Cux1-206ENSMUST00000176172 Dcaf11Q91VU6 549 aa21.33■■□□□ 1.01
Cux1-206ENSMUST00000176172 Golga2Q921M4 999 aa21.33■■□□□ 1.01
Cux1-206ENSMUST00000176172 Sart3Q9JLI8 962 aaKnown RBP21.32■■□□□ 1
Cux1-206ENSMUST00000176172 Phldb1Q6PDH0 1371 aaKnown RBP21.32■■□□□ 1
Cux1-206ENSMUST00000176172 U2surpQ6NV83 1029 aaKnown RBP21.31■■□□□ 1
Cux1-206ENSMUST00000176172 Rock2P70336 1388 aa21.3■■□□□ 1
Cux1-206ENSMUST00000176172 Kif3bQ61771 747 aa21.3■■□□□ 1
Cux1-206ENSMUST00000176172 EspnQ9ET47 871 aa21.29■■□□□ 1
Cux1-206ENSMUST00000176172 Stard8Q8K031 1019 aa21.29■■□□□ 1
Cux1-206ENSMUST00000176172 Pde3bQ61409 1100 aa21.28■■□□□ 1
Cux1-206ENSMUST00000176172 Rsph4aQ8BYM7 716 aa21.28■■□□□ 1
Cux1-206ENSMUST00000176172 Plekhh2Q8C115 1491 aa21.28■■□□□ 1
Cux1-206ENSMUST00000176172 Tmco5bQ80X59 307 aa21.27■■□□□ 1
Cux1-206ENSMUST00000176172 PtmsQ9D0J8 101 aaKnown RBP21.26■□□□□ 0.99
Cux1-206ENSMUST00000176172 Birc3O08863 600 aa21.25■□□□□ 0.99
Cux1-206ENSMUST00000176172 Dnai1Q8C0M8 701 aa21.24■□□□□ 0.99
Cux1-206ENSMUST00000176172 Eif4g2Q62448 906 aaKnown RBP21.24■□□□□ 0.99
Cux1-206ENSMUST00000176172 Sart1Q9Z315 806 aaKnown RBP21.24■□□□□ 0.99
Cux1-206ENSMUST00000176172 Cecr2E9Q2Z1 1453 aa21.24■□□□□ 0.99
Cux1-206ENSMUST00000176172 Rapgef2Q8CHG7 1496 aa21.23■□□□□ 0.99
Cux1-206ENSMUST00000176172 Plin1Q8CGN5 517 aa21.23■□□□□ 0.99
Cux1-206ENSMUST00000176172 Psme1P97371 249 aa21.22■□□□□ 0.99
Cux1-206ENSMUST00000176172 UacaQ8CGB3 1411 aa21.22■□□□□ 0.99
Cux1-206ENSMUST00000176172 Ccnb3Q810T2 1396 aa21.22■□□□□ 0.99
Cux1-206ENSMUST00000176172 Atad2bE9Q166 1460 aaKnown RBP21.21■□□□□ 0.99
Cux1-206ENSMUST00000176172 Txndc2Q6P902 515 aa21.21■□□□□ 0.99
Cux1-206ENSMUST00000176172 Sh3bp5Q9Z131 463 aa21.21■□□□□ 0.99
Cux1-206ENSMUST00000176172 Q3TQI7 289 aaKnown RBP21.21■□□□□ 0.99
Cux1-206ENSMUST00000176172 Spryd3E9Q9B3 442 aa21.2■□□□□ 0.98
Cux1-206ENSMUST00000176172 LrpprcQ6PB66 1392 aaKnown RBP21.19■□□□□ 0.98
Cux1-206ENSMUST00000176172 Slc4a1apE9PX68 744 aa21.18■□□□□ 0.98
Cux1-206ENSMUST00000176172 Adam1bQ8R534 806 aa21.17■□□□□ 0.98
Cux1-206ENSMUST00000176172 HdgfP51859 237 aaKnown RBP21.15■□□□□ 0.98
Cux1-206ENSMUST00000176172 Spag9Q58A65 1321 aaKnown RBP21.15■□□□□ 0.98
Cux1-206ENSMUST00000176172 Rassf8Q8CJ96 419 aa21.14■□□□□ 0.97
Cux1-206ENSMUST00000176172 Cluap1Q8R3P7 413 aa21.14■□□□□ 0.97
Cux1-206ENSMUST00000176172 Clstn1Q9EPL2 979 aa21.13■□□□□ 0.97
Cux1-206ENSMUST00000176172 Ccar1Q8CH18 1146 aaKnown RBP21.12■□□□□ 0.97
Cux1-206ENSMUST00000176172 Fan1Q69ZT1 1020 aa21.12■□□□□ 0.97
Cux1-206ENSMUST00000176172 Smarca2Q6DIC0 1577 aa21.12■□□□□ 0.97
Cux1-206ENSMUST00000176172 Ksr2Q3UVC0 959 aa21.12■□□□□ 0.97
Cux1-206ENSMUST00000176172 Ipo8Q7TMY7 1010 aa21.12■□□□□ 0.97
Cux1-206ENSMUST00000176172 CrbnQ8C7D2 445 aa21.11■□□□□ 0.97
Cux1-206ENSMUST00000176172 CenpjQ569L8 1344 aa21.11■□□□□ 0.97
Cux1-206ENSMUST00000176172 Irx3P81067 507 aa21.1■□□□□ 0.97
Cux1-206ENSMUST00000176172 Utp14aQ640M1 767 aaKnown RBP21.09■□□□□ 0.97
Cux1-206ENSMUST00000176172 Gm973E9Q295 1059 aa21.08■□□□□ 0.97
Cux1-206ENSMUST00000176172 Znf316Q6PGE4 1016 aa21.08■□□□□ 0.97
Cux1-206ENSMUST00000176172 Znf330Q922H9 316 aa21.08■□□□□ 0.97
Cux1-206ENSMUST00000176172 Usp47Q8BY87 1376 aa21.08■□□□□ 0.97
Cux1-206ENSMUST00000176172 Nol10Q5RJG1 687 aaKnown RBP21.07■□□□□ 0.96
Cux1-206ENSMUST00000176172 Synj1Q8CHC4 1574 aa21.07■□□□□ 0.96
Cux1-206ENSMUST00000176172 Sox12Q04890 314 aa21.07■□□□□ 0.96
Cux1-206ENSMUST00000176172 AU015836B2RUM3 263 aa21.06■□□□□ 0.96
Cux1-206ENSMUST00000176172 Ipo9Q91YE6 1041 aa21.06■□□□□ 0.96
Cux1-206ENSMUST00000176172 Dhx29Q6PGC1 1365 aaKnown RBP21.05■□□□□ 0.96
Cux1-206ENSMUST00000176172 MecomP14404 1042 aa21.04■□□□□ 0.96
Cux1-206ENSMUST00000176172 Ecm2Q5FW85 670 aa21.04■□□□□ 0.96
Cux1-206ENSMUST00000176172 Pank3Q8R2W9 370 aa21.04■□□□□ 0.96
Cux1-206ENSMUST00000176172 Anapc15P60007 132 aa21.04■□□□□ 0.96
Cux1-206ENSMUST00000176172 Iffo2Q8R2V2 512 aa21.04■□□□□ 0.96
Cux1-206ENSMUST00000176172 Tnnt1O88346 262 aa21.03■□□□□ 0.96
Cux1-206ENSMUST00000176172 Mfap1aC0HKD8 439 aaKnown RBP21.02■□□□□ 0.96
Cux1-206ENSMUST00000176172 Mfap1bC0HKD9 439 aaKnown RBP21.02■□□□□ 0.96
Cux1-206ENSMUST00000176172 Smg6P61406 1418 aaKnown RBP21.02■□□□□ 0.95
Cux1-206ENSMUST00000176172 Dnttip2Q8R2M2 758 aaKnown RBP21.01■□□□□ 0.95
Cux1-206ENSMUST00000176172 Tsen2Q6P7W5 460 aa21.01■□□□□ 0.95
Cux1-206ENSMUST00000176172 WrnO09053 1401 aa21■□□□□ 0.95
Cux1-206ENSMUST00000176172 Erich6bQ9D4S6 220 aa20.99■□□□□ 0.95
Cux1-206ENSMUST00000176172 Ggt6Q6PDE7 497 aa20.98■□□□□ 0.95
Cux1-206ENSMUST00000176172 Smarca4Q3TKT4 1613 aaKnown RBP20.97■□□□□ 0.95
Cux1-206ENSMUST00000176172 Pcmtd1P59913 357 aa20.97■□□□□ 0.95
Cux1-206ENSMUST00000176172 Fam184bQ0KK56 942 aa20.95■□□□□ 0.94
Retrieved 100 of 22,080 RNA–protein pairs in 8.3 ms