RNA–Protein interactions for RNA: ENSMUST00000176172.7

Cux1-206, Transcript of Homeobox protein cut-like 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Cux1, Length 4,882 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1-206ENSMUST00000176172 Rhox8Q6VSS7 320 aa29.94■■■□□ 2.38
Cux1-206ENSMUST00000176172 Rpgrip1Q9EPQ2 1331 aa27.17■■□□□ 1.94
Cux1-206ENSMUST00000176172 Ccdc136Q3TVA9 1136 aa26.54■■□□□ 1.84
Cux1-206ENSMUST00000176172 Ehmt2Q9Z148 1263 aaKnown RBP26.54■■□□□ 1.84
Cux1-206ENSMUST00000176172 Esf1Q3V1V3 845 aaKnown RBP26.38■■□□□ 1.81
Cux1-206ENSMUST00000176172 Cngb1E1AZ71 1325 aa26.26■■□□□ 1.79
Cux1-206ENSMUST00000176172 Trim41Q5NCC3 630 aa26.15■■□□□ 1.78
Cux1-206ENSMUST00000176172 NischQ80TM9 1593 aa26.08■■□□□ 1.77
Cux1-206ENSMUST00000176172 Las1lA2BE28 776 aaKnown RBP26■■□□□ 1.75
Cux1-206ENSMUST00000176172 Gab3Q8BSM5 595 aa25.94■■□□□ 1.74
Cux1-206ENSMUST00000176172 Wdr66E9Q743 1299 aa25.89■■□□□ 1.74
Cux1-206ENSMUST00000176172 Zeb1Q64318 1117 aa25.83■■□□□ 1.73
Cux1-206ENSMUST00000176172 Ube2uB1AUC4 352 aa25.79■■□□□ 1.72
Cux1-206ENSMUST00000176172 Npm2Q80W85 207 aa25.77■■□□□ 1.72
Cux1-206ENSMUST00000176172 Myt1lP97500 1187 aa25.54■■□□□ 1.68
Cux1-206ENSMUST00000176172 Pelp1Q9DBD5 1123 aaKnown RBP25.34■■□□□ 1.65
Cux1-206ENSMUST00000176172 Acin1Q9JIX8 1338 aaKnown RBP25.13■■□□□ 1.61
Cux1-206ENSMUST00000176172 NefmP08553 848 aa25.13■■□□□ 1.61
Cux1-206ENSMUST00000176172 UbtfP25976 765 aaKnown RBP25.01■■□□□ 1.59
Cux1-206ENSMUST00000176172 HrcG5E8J6 738 aa24.98■■□□□ 1.59
Cux1-206ENSMUST00000176172 Stra8P70278 393 aa24.77■■□□□ 1.56
Cux1-206ENSMUST00000176172 Ccdc180J3QNE4 1664 aa24.73■■□□□ 1.55
Cux1-206ENSMUST00000176172 Il27Q8K3I6 234 aa24.71■■□□□ 1.55
Cux1-206ENSMUST00000176172 CenpbP27790 599 aa24.67■■□□□ 1.54
Cux1-206ENSMUST00000176172 Zcchc6Q5BLK4 1491 aaKnown RBP24.48■■□□□ 1.51
Cux1-206ENSMUST00000176172 Slc24a1Q91WD8 1130 aa24.45■■□□□ 1.5
Cux1-206ENSMUST00000176172 Abcc9P70170 1546 aa24.35■■□□□ 1.49
Cux1-206ENSMUST00000176172 Rtl1Q7M732 1744 aa24.33■■□□□ 1.49
Cux1-206ENSMUST00000176172 Cdk11bP24788 784 aaKnown RBP24.32■■□□□ 1.48
Cux1-206ENSMUST00000176172 Fam50aQ9WV03 339 aaKnown RBP24.29■■□□□ 1.48
Cux1-206ENSMUST00000176172 Ap3b1Q9Z1T1 1105 aa24.2■■□□□ 1.46
Cux1-206ENSMUST00000176172 Anp32bQ9EST5 272 aaKnown RBP24.19■■□□□ 1.46
Cux1-206ENSMUST00000176172 Pcgf6Q99NA9 353 aa24.16■■□□□ 1.46
Cux1-206ENSMUST00000176172 NclP09405 707 aaKnown RBP24.14■■□□□ 1.45
Cux1-206ENSMUST00000176172 NrdcQ8BHG1 1161 aa24.13■■□□□ 1.45
Cux1-206ENSMUST00000176172 Amer1Q7TS75 1132 aa24.07■■□□□ 1.44
Cux1-206ENSMUST00000176172 Neurod1Q60867 357 aa24.06■■□□□ 1.44
Cux1-206ENSMUST00000176172 Nop58Q6DFW4 536 aaKnown RBP24.05■■□□□ 1.44
Cux1-206ENSMUST00000176172 Tnnt3Q9QZ47 272 aa24.02■■□□□ 1.44
Cux1-206ENSMUST00000176172 Gm35339A0A140LHH9 1649 aa24■■□□□ 1.43
Cux1-206ENSMUST00000176172 TonslQ6NZL6 1363 aa23.92■■□□□ 1.42
Cux1-206ENSMUST00000176172 Os9Q8K2C7 672 aa23.88■■□□□ 1.41
Cux1-206ENSMUST00000176172 NeflP08551 543 aa23.83■■□□□ 1.4
Cux1-206ENSMUST00000176172 Npm1Q61937 292 aaKnown RBP23.82■■□□□ 1.4
Cux1-206ENSMUST00000176172 Mier1Q5UAK0 511 aa23.77■■□□□ 1.4
Cux1-206ENSMUST00000176172 Ppargc1bQ8VHJ7 1014 aa23.77■■□□□ 1.4
Cux1-206ENSMUST00000176172 Supt5hO55201 1082 aaKnown RBP23.73■■□□□ 1.39
Cux1-206ENSMUST00000176172 Abcc8B2RUS7 1588 aa23.71■■□□□ 1.39
Cux1-206ENSMUST00000176172 Eif5bQ05D44 1216 aaKnown RBP23.7■■□□□ 1.38
Cux1-206ENSMUST00000176172 Myt1Q8CFC2 1127 aa23.62■■□□□ 1.37
Cux1-206ENSMUST00000176172 Lmod2Q3UHZ5 550 aa23.62■■□□□ 1.37
Cux1-206ENSMUST00000176172 Plekhg3Q4VAC9 1341 aa23.57■■□□□ 1.36
Cux1-206ENSMUST00000176172 4933416C03RikQ3V063 378 aa23.49■■□□□ 1.35
Cux1-206ENSMUST00000176172 Ttbk1Q6PCN3 1308 aa23.45■■□□□ 1.34
Cux1-206ENSMUST00000176172 ClspnQ80YR7 1315 aa23.43■■□□□ 1.34
Cux1-206ENSMUST00000176172 Brd4Q9ESU6 1400 aaKnown RBP23.42■■□□□ 1.34
Cux1-206ENSMUST00000176172 Zbtb7cQ8VCZ7 619 aa23.41■■□□□ 1.34
Cux1-206ENSMUST00000176172 Hnrnpul2Q00PI9 745 aaKnown RBP23.4■■□□□ 1.34
Cux1-206ENSMUST00000176172 4930567H17RikQ3V0K5 233 aa23.3■■□□□ 1.32
Cux1-206ENSMUST00000176172 Rtl5Q5DTT4 599 aa23.26■■□□□ 1.31
Cux1-206ENSMUST00000176172 Clip1Q922J3 1391 aa23.25■■□□□ 1.31
Cux1-206ENSMUST00000176172 Cep164Q5DU05 1446 aa23.22■■□□□ 1.31
Cux1-206ENSMUST00000176172 Gm13697A2AK42 830 aa23.19■■□□□ 1.3
Cux1-206ENSMUST00000176172 Chic1Q8CBW7 227 aa23.18■■□□□ 1.3
Cux1-206ENSMUST00000176172 Eid3Q3V124 375 aa23.17■■□□□ 1.3
Cux1-206ENSMUST00000176172 Hdac5Q9Z2V6 1113 aa23.16■■□□□ 1.3
Cux1-206ENSMUST00000176172 Ccer2J3QPU5 274 aa23.16■■□□□ 1.3
Cux1-206ENSMUST00000176172 Ifnlr1Q8CGK5 535 aa23.13■■□□□ 1.29
Cux1-206ENSMUST00000176172 Erich6D3Z6S9 713 aa23.08■■□□□ 1.29
Cux1-206ENSMUST00000176172 Zbtb4Q5F293 982 aa23.05■■□□□ 1.28
Cux1-206ENSMUST00000176172 Dcaf1Q80TR8 1506 aa23.05■■□□□ 1.28
Cux1-206ENSMUST00000176172 Anp32aO35381 247 aa23.03■■□□□ 1.28
Cux1-206ENSMUST00000176172 Fkbp15Q6P9Q6 1216 aaKnown RBP23.01■■□□□ 1.27
Cux1-206ENSMUST00000176172 Nlrp6Q91WS2 869 aa23■■□□□ 1.27
Cux1-206ENSMUST00000176172 Ubl4bQ9CQ84 188 aa22.99■■□□□ 1.27
Cux1-206ENSMUST00000176172 Atp1b4Q99ME6 356 aa22.98■■□□□ 1.27
Cux1-206ENSMUST00000176172 Mapk8ip2Q9ERE9 830 aa22.97■■□□□ 1.27
Cux1-206ENSMUST00000176172 Sall2Q9QX96 1004 aa22.94■■□□□ 1.26
Cux1-206ENSMUST00000176172 Rb1cc1Q9ESK9 1588 aa22.92■■□□□ 1.26
Cux1-206ENSMUST00000176172 Prdm10Q3UTQ7 1184 aa22.83■■□□□ 1.25
Cux1-206ENSMUST00000176172 Gm13695A2AK44 830 aa22.82■■□□□ 1.24
Cux1-206ENSMUST00000176172 Anks4bQ8K3X6 423 aa22.78■■□□□ 1.24
Cux1-206ENSMUST00000176172 Polr3glQ8R0C0 218 aa22.76■■□□□ 1.23
Cux1-206ENSMUST00000176172 BlmO88700 1416 aa22.76■■□□□ 1.23
Cux1-206ENSMUST00000176172 DaxxO35613 739 aa22.74■■□□□ 1.23
Cux1-206ENSMUST00000176172 Chic2Q9D9G3 165 aa22.74■■□□□ 1.23
Cux1-206ENSMUST00000176172 Clstn2Q9ER65 966 aa22.74■■□□□ 1.23
Cux1-206ENSMUST00000176172 Upf2A2AT37 1269 aaKnown RBP22.67■■□□□ 1.22
Cux1-206ENSMUST00000176172 Setd5Q5XJV7 1441 aa22.65■■□□□ 1.22
Cux1-206ENSMUST00000176172 NacadQ5SWP3 1504 aa22.64■■□□□ 1.21
Cux1-206ENSMUST00000176172 Mrs2Q5NCE8 434 aa22.59■■□□□ 1.21
Cux1-206ENSMUST00000176172 Calr4Q3TQS0 420 aa22.57■■□□□ 1.2
Cux1-206ENSMUST00000176172 Csrnp3P59055 597 aa22.53■■□□□ 1.2
Cux1-206ENSMUST00000176172 Aplp2Q06335 707 aa22.53■■□□□ 1.2
Cux1-206ENSMUST00000176172 Golga3P55937 1487 aa22.51■■□□□ 1.19
Cux1-206ENSMUST00000176172 Rsf1E9PWW9 1441 aaKnown RBP22.48■■□□□ 1.19
Cux1-206ENSMUST00000176172 Gm38655A0A286YDK6 273 aa22.48■■□□□ 1.19
Cux1-206ENSMUST00000176172 Kif15Q6P9L6 1387 aa22.45■■□□□ 1.19
Cux1-206ENSMUST00000176172 Ppp4r2Q0VGB7 417 aa22.45■■□□□ 1.18
Cux1-206ENSMUST00000176172 Rad21Q61550 635 aaKnown RBP22.45■■□□□ 1.18
Retrieved 100 of 22,080 RNA–protein pairs in 23.6 ms