RNA–Protein interactions for RNA: ENSMUST00000159592.7

Ssh1-204, Transcript of Protein phosphatase Slingshot homolog 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ssh1, Length 8,436 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssh1-204ENSMUST00000159592 Mak16Q8BGS0 296 aaKnown RBP17.16■□□□□ 0.34
Ssh1-204ENSMUST00000159592 Mphosph9A6H5Y1 991 aa17.16■□□□□ 0.34
Ssh1-204ENSMUST00000159592 Ercc6F8VPZ5 1481 aa17.16■□□□□ 0.34
Ssh1-204ENSMUST00000159592 Fyco1Q8VDC1 1437 aa17.15■□□□□ 0.34
Ssh1-204ENSMUST00000159592 NudcO35685 332 aaKnown RBP17.14■□□□□ 0.34
Ssh1-204ENSMUST00000159592 Znf316Q6PGE4 1016 aa17.14■□□□□ 0.33
Ssh1-204ENSMUST00000159592 Smg6P61406 1418 aaKnown RBP17.14■□□□□ 0.33
Ssh1-204ENSMUST00000159592 Hsp90b1P08113 802 aaKnown RBP17.14■□□□□ 0.33
Ssh1-204ENSMUST00000159592 Tmf1B9EKI3 1091 aa17.13■□□□□ 0.33
Ssh1-204ENSMUST00000159592 Pcmtd1P59913 357 aa17.13■□□□□ 0.33
Ssh1-204ENSMUST00000159592 Ecm2Q5FW85 670 aa17.13■□□□□ 0.33
Ssh1-204ENSMUST00000159592 Safb2Q80YR5 991 aaKnown RBP17.13■□□□□ 0.33
Ssh1-204ENSMUST00000159592 Mfap1aC0HKD8 439 aaKnown RBP17.11■□□□□ 0.33
Ssh1-204ENSMUST00000159592 Mfap1bC0HKD9 439 aaKnown RBP17.11■□□□□ 0.33
Ssh1-204ENSMUST00000159592 Ifit1bl1D3Z6F0 470 aa17.11■□□□□ 0.33
Ssh1-204ENSMUST00000159592 CrbnQ8C7D2 445 aa17.1■□□□□ 0.33
Ssh1-204ENSMUST00000159592 Cluap1Q8R3P7 413 aa17.1■□□□□ 0.33
Ssh1-204ENSMUST00000159592 Kif27Q7M6Z4 1394 aa17.09■□□□□ 0.33
Ssh1-204ENSMUST00000159592 Map4P27546 1125 aaKnown RBP17.09■□□□□ 0.33
Ssh1-204ENSMUST00000159592 Trak1Q6PD31 939 aa17.09■□□□□ 0.33
Ssh1-204ENSMUST00000159592 NgefQ8CHT1 710 aa17.08■□□□□ 0.33
Ssh1-204ENSMUST00000159592 Aebp1Q640N1 1128 aa17.08■□□□□ 0.32
Ssh1-204ENSMUST00000159592 Rapgef2Q8CHG7 1496 aa17.08■□□□□ 0.32
Ssh1-204ENSMUST00000159592 CntlnA2AM05 1397 aa17.08■□□□□ 0.32
Ssh1-204ENSMUST00000159592 MccE9PWI3 1003 aa17.07■□□□□ 0.32
Ssh1-204ENSMUST00000159592 Cabp1Q9JLK7 227 aa17.06■□□□□ 0.32
Ssh1-204ENSMUST00000159592 Golga2Q921M4 999 aa17.06■□□□□ 0.32
Ssh1-204ENSMUST00000159592 PnnO35691 725 aaKnown RBP17.05■□□□□ 0.32
Ssh1-204ENSMUST00000159592 Rrp12Q6P5B0 1295 aaKnown RBP17.05■□□□□ 0.32
Ssh1-204ENSMUST00000159592 Iqcf3Q9D498 203 aa17.05■□□□□ 0.32
Ssh1-204ENSMUST00000159592 PrkcshO08795 521 aa17.05■□□□□ 0.32
Ssh1-204ENSMUST00000159592 MsnP26041 577 aaKnown RBP17.05■□□□□ 0.32
Ssh1-204ENSMUST00000159592 Znf330Q922H9 316 aa17.05■□□□□ 0.32
Ssh1-204ENSMUST00000159592 Pes1Q9EQ61 584 aaKnown RBP17.05■□□□□ 0.32
Ssh1-204ENSMUST00000159592 Tmco5bQ80X59 307 aa17.04■□□□□ 0.32
Ssh1-204ENSMUST00000159592 Rtn4Q99P72 1162 aaKnown RBP17.04■□□□□ 0.32
Ssh1-204ENSMUST00000159592 U2surpQ6NV83 1029 aaKnown RBP17.03■□□□□ 0.32
Ssh1-204ENSMUST00000159592 SlkO54988 1233 aa17.02■□□□□ 0.32
Ssh1-204ENSMUST00000159592 Plin1Q8CGN5 517 aa17.02■□□□□ 0.32
Ssh1-204ENSMUST00000159592 GorabQ8BRM2 368 aa17.02■□□□□ 0.31
Ssh1-204ENSMUST00000159592 HnrnpuQ8VEK3 800 aaKnown RBP17■□□□□ 0.31
Ssh1-204ENSMUST00000159592 Dcaf11Q91VU6 549 aa17■□□□□ 0.31
Ssh1-204ENSMUST00000159592 U2af1Q9D883 239 aaKnown RBP16.99■□□□□ 0.31
Ssh1-204ENSMUST00000159592 Synj1Q8CHC4 1574 aa16.99■□□□□ 0.31
Ssh1-204ENSMUST00000159592 Clstn1Q9EPL2 979 aa16.98■□□□□ 0.31
Ssh1-204ENSMUST00000159592 Gtf2e1Q9D0D5 440 aa16.97■□□□□ 0.31
Ssh1-204ENSMUST00000159592 PtmsQ9D0J8 101 aaKnown RBP16.97■□□□□ 0.31
Ssh1-204ENSMUST00000159592 Rock2P70336 1388 aa16.97■□□□□ 0.31
Ssh1-204ENSMUST00000159592 Senp3Q9EP97 568 aaKnown RBP16.97■□□□□ 0.31
Ssh1-204ENSMUST00000159592 Sh3bp5Q9Z131 463 aa16.97■□□□□ 0.31
Ssh1-204ENSMUST00000159592 Znf326O88291 580 aa16.96■□□□□ 0.3
Ssh1-204ENSMUST00000159592 Rpap1Q80TE0 1409 aa16.95■□□□□ 0.3
Ssh1-204ENSMUST00000159592 Smarca2Q6DIC0 1577 aa16.95■□□□□ 0.3
Ssh1-204ENSMUST00000159592 Ksr2Q3UVC0 959 aa16.94■□□□□ 0.3
Ssh1-204ENSMUST00000159592 Usp47Q8BY87 1376 aa16.92■□□□□ 0.3
Ssh1-204ENSMUST00000159592 Stk26Q99JT2 416 aa16.92■□□□□ 0.3
Ssh1-204ENSMUST00000159592 Gpatch11Q3UFS4 262 aa16.92■□□□□ 0.3
Ssh1-204ENSMUST00000159592 Mre11Q61216 706 aa16.91■□□□□ 0.3
Ssh1-204ENSMUST00000159592 Cc2d2aQ8CFW7 1633 aa16.91■□□□□ 0.3
Ssh1-204ENSMUST00000159592 CgnP59242 1191 aa16.9■□□□□ 0.3
Ssh1-204ENSMUST00000159592 Sart3Q9JLI8 962 aaKnown RBP16.9■□□□□ 0.3
Ssh1-204ENSMUST00000159592 Ddrgk1Q80WW9 315 aa16.9■□□□□ 0.3
Ssh1-204ENSMUST00000159592 Plekhh2Q8C115 1491 aa16.89■□□□□ 0.29
Ssh1-204ENSMUST00000159592 Rassf8Q8CJ96 419 aa16.89■□□□□ 0.29
Ssh1-204ENSMUST00000159592 4933402E13RikQ9D4D2 429 aa16.88■□□□□ 0.29
Ssh1-204ENSMUST00000159592 Gm973E9Q295 1059 aa16.88■□□□□ 0.29
Ssh1-204ENSMUST00000159592 Rtf1A2AQ19 715 aaKnown RBP16.87■□□□□ 0.29
Ssh1-204ENSMUST00000159592 VgfQ0VGU4 617 aa16.87■□□□□ 0.29
Ssh1-204ENSMUST00000159592 Kiaa0754Q69ZZ9 979 aa16.87■□□□□ 0.29
Ssh1-204ENSMUST00000159592 Slc4a1apE9PX68 744 aa16.87■□□□□ 0.29
Ssh1-204ENSMUST00000159592 Ylpm1Q9R0I7 1386 aaKnown RBP16.87■□□□□ 0.29
Ssh1-204ENSMUST00000159592 Znf710Q3U288 666 aa16.86■□□□□ 0.29
Ssh1-204ENSMUST00000159592 Pknox2Q8BG99 474 aa16.86■□□□□ 0.29
Ssh1-204ENSMUST00000159592 Srcin1Q9QWI6 1250 aa16.86■□□□□ 0.29
Ssh1-204ENSMUST00000159592 Cecr2E9Q2Z1 1453 aa16.86■□□□□ 0.29
Ssh1-204ENSMUST00000159592 Nup155Q99P88 1391 aaKnown RBP16.86■□□□□ 0.29
Ssh1-204ENSMUST00000159592 Becn1O88597 448 aa16.86■□□□□ 0.29
Ssh1-204ENSMUST00000159592 Rsph3aQ3UFY4 516 aa16.86■□□□□ 0.29
Ssh1-204ENSMUST00000159592 Pank3Q8R2W9 370 aa16.85■□□□□ 0.29
Ssh1-204ENSMUST00000159592 CftrP26361 1476 aa16.85■□□□□ 0.29
Ssh1-204ENSMUST00000159592 Ccar1Q8CH18 1146 aaKnown RBP16.85■□□□□ 0.29
Ssh1-204ENSMUST00000159592 Plcd4Q8K3R3 807 aa16.85■□□□□ 0.29
Ssh1-204ENSMUST00000159592 RdxP26043 583 aaKnown RBP16.84■□□□□ 0.29
Ssh1-204ENSMUST00000159592 Eif2s2Q99L45 331 aaKnown RBP16.84■□□□□ 0.29
Ssh1-204ENSMUST00000159592 Calcoco2A2A6M5 331 aa16.84■□□□□ 0.29
Ssh1-204ENSMUST00000159592 Birc3O08863 600 aa16.83■□□□□ 0.28
Ssh1-204ENSMUST00000159592 Cttnbp2B9EJA2 1648 aa16.82■□□□□ 0.28
Ssh1-204ENSMUST00000159592 Iffo2Q8R2V2 512 aa16.81■□□□□ 0.28
Ssh1-204ENSMUST00000159592 Ccnb3Q810T2 1396 aa16.81■□□□□ 0.28
Ssh1-204ENSMUST00000159592 Zfp777B9EKF4 885 aa16.81■□□□□ 0.28
Ssh1-204ENSMUST00000159592 Ush1cQ9ES64 910 aa16.8■□□□□ 0.28
Ssh1-204ENSMUST00000159592 Ak7Q9D2H2 614 aa16.8■□□□□ 0.28
Ssh1-204ENSMUST00000159592 Anapc15P60007 132 aa16.8■□□□□ 0.28
Ssh1-204ENSMUST00000159592 Cald1E9QA15 768 aaKnown RBP16.8■□□□□ 0.28
Ssh1-204ENSMUST00000159592 Pak3Q61036 559 aa16.79■□□□□ 0.28
Ssh1-204ENSMUST00000159592 Tnnt1O88346 262 aa16.79■□□□□ 0.28
Ssh1-204ENSMUST00000159592 Trim30aP15533 496 aa16.79■□□□□ 0.28
Ssh1-204ENSMUST00000159592 UacaQ8CGB3 1411 aa16.78■□□□□ 0.28
Ssh1-204ENSMUST00000159592 Rfx1P48377 963 aa16.78■□□□□ 0.28
Ssh1-204ENSMUST00000159592 Inpp5dQ9ES52 1191 aa16.78■□□□□ 0.28
Retrieved 100 of 22,080 RNA–protein pairs in 14.2 ms