RNA–Protein interactions for RNA: ENSMUST00000114252.7

Col11a2-202, Transcript of Collagen alpha-2(XI) chain, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Col11a2, Length 5,620 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2-202ENSMUST00000114252 Rtn4Q99P72 1162 aaKnown RBP20.58■□□□□ 0.89
Col11a2-202ENSMUST00000114252 Cnga1P29974 684 aa20.57■□□□□ 0.88
Col11a2-202ENSMUST00000114252 Stk24Q99KH8 431 aa20.57■□□□□ 0.88
Col11a2-202ENSMUST00000114252 Rundc1Q0VDN7 615 aa20.55■□□□□ 0.88
Col11a2-202ENSMUST00000114252 Arhgap27A2AB59 869 aa20.54■□□□□ 0.88
Col11a2-202ENSMUST00000114252 Sh3bp5Q9Z131 463 aa20.54■□□□□ 0.88
Col11a2-202ENSMUST00000114252 Zfp777B9EKF4 885 aa20.54■□□□□ 0.88
Col11a2-202ENSMUST00000114252 Clstn1Q9EPL2 979 aa20.54■□□□□ 0.88
Col11a2-202ENSMUST00000114252 Sin3aQ60520 1274 aaKnown RBP20.53■□□□□ 0.88
Col11a2-202ENSMUST00000114252 Zscan21Q07231 555 aa20.52■□□□□ 0.88
Col11a2-202ENSMUST00000114252 Taok2Q6ZQ29 1240 aa20.52■□□□□ 0.88
Col11a2-202ENSMUST00000114252 Mak16Q8BGS0 296 aaKnown RBP20.52■□□□□ 0.87
Col11a2-202ENSMUST00000114252 Gtf3c3Q3TMP1 882 aa20.51■□□□□ 0.87
Col11a2-202ENSMUST00000114252 Fhad1A6PWD2 1420 aa20.5■□□□□ 0.87
Col11a2-202ENSMUST00000114252 NgefQ8CHT1 710 aa20.49■□□□□ 0.87
Col11a2-202ENSMUST00000114252 Mfap1aC0HKD8 439 aaKnown RBP20.49■□□□□ 0.87
Col11a2-202ENSMUST00000114252 Mfap1bC0HKD9 439 aaKnown RBP20.49■□□□□ 0.87
Col11a2-202ENSMUST00000114252 Pkd2O35245 966 aa20.48■□□□□ 0.87
Col11a2-202ENSMUST00000114252 Pds5bQ4VA53 1446 aaKnown RBP20.48■□□□□ 0.87
Col11a2-202ENSMUST00000114252 Nolc1E9Q5C9 702 aaKnown RBP20.47■□□□□ 0.87
Col11a2-202ENSMUST00000114252 Ddrgk1Q80WW9 315 aa20.45■□□□□ 0.86
Col11a2-202ENSMUST00000114252 Cluap1Q8R3P7 413 aa20.45■□□□□ 0.86
Col11a2-202ENSMUST00000114252 Kiaa0754Q69ZZ9 979 aa20.44■□□□□ 0.86
Col11a2-202ENSMUST00000114252 Tmf1B9EKI3 1091 aa20.43■□□□□ 0.86
Col11a2-202ENSMUST00000114252 ChgaP26339 463 aaKnown RBP20.43■□□□□ 0.86
Col11a2-202ENSMUST00000114252 Anapc15P60007 132 aa20.43■□□□□ 0.86
Col11a2-202ENSMUST00000114252 Rassf8Q8CJ96 419 aa20.43■□□□□ 0.86
Col11a2-202ENSMUST00000114252 RdxP26043 583 aaKnown RBP20.43■□□□□ 0.86
Col11a2-202ENSMUST00000114252 SlkO54988 1233 aa20.42■□□□□ 0.86
Col11a2-202ENSMUST00000114252 Sart3Q9JLI8 962 aaKnown RBP20.42■□□□□ 0.86
Col11a2-202ENSMUST00000114252 CgnP59242 1191 aa20.42■□□□□ 0.86
Col11a2-202ENSMUST00000114252 U2surpQ6NV83 1029 aaKnown RBP20.42■□□□□ 0.86
Col11a2-202ENSMUST00000114252 Tmco5bQ80X59 307 aa20.4■□□□□ 0.86
Col11a2-202ENSMUST00000114252 4933402E13RikQ9D4D2 429 aa20.4■□□□□ 0.86
Col11a2-202ENSMUST00000114252 Golga2Q921M4 999 aa20.38■□□□□ 0.85
Col11a2-202ENSMUST00000114252 Map4P27546 1125 aaKnown RBP20.38■□□□□ 0.85
Col11a2-202ENSMUST00000114252 Iffo2Q8R2V2 512 aa20.37■□□□□ 0.85
Col11a2-202ENSMUST00000114252 VgfQ0VGU4 617 aa20.37■□□□□ 0.85
Col11a2-202ENSMUST00000114252 Pde3bQ61409 1100 aa20.36■□□□□ 0.85
Col11a2-202ENSMUST00000114252 Cald1E9QA15 768 aaKnown RBP20.36■□□□□ 0.85
Col11a2-202ENSMUST00000114252 Becn1O88597 448 aa20.36■□□□□ 0.85
Col11a2-202ENSMUST00000114252 Rtf1A2AQ19 715 aaKnown RBP20.36■□□□□ 0.85
Col11a2-202ENSMUST00000114252 U2af1Q9D883 239 aaKnown RBP20.35■□□□□ 0.85
Col11a2-202ENSMUST00000114252 GorabQ8BRM2 368 aa20.35■□□□□ 0.85
Col11a2-202ENSMUST00000114252 Ifit1bl1D3Z6F0 470 aa20.33■□□□□ 0.85
Col11a2-202ENSMUST00000114252 Trim30aP15533 496 aa20.33■□□□□ 0.85
Col11a2-202ENSMUST00000114252 Gpatch11Q3UFS4 262 aa20.33■□□□□ 0.85
Col11a2-202ENSMUST00000114252 Znf330Q922H9 316 aa20.33■□□□□ 0.85
Col11a2-202ENSMUST00000114252 Gtf2e1Q9D0D5 440 aa20.33■□□□□ 0.85
Col11a2-202ENSMUST00000114252 R3hcc1Q8BSI6 488 aa20.32■□□□□ 0.84
Col11a2-202ENSMUST00000114252 CrbnQ8C7D2 445 aa20.31■□□□□ 0.84
Col11a2-202ENSMUST00000114252 Smarce1O54941 411 aaKnown RBP20.3■□□□□ 0.84
Col11a2-202ENSMUST00000114252 SetQ9EQU5 289 aaKnown RBP20.3■□□□□ 0.84
Col11a2-202ENSMUST00000114252 CntlnA2AM05 1397 aa20.3■□□□□ 0.84
Col11a2-202ENSMUST00000114252 Mphosph9A6H5Y1 991 aa20.3■□□□□ 0.84
Col11a2-202ENSMUST00000114252 Plin1Q8CGN5 517 aa20.28■□□□□ 0.84
Col11a2-202ENSMUST00000114252 Dcaf11Q91VU6 549 aa20.28■□□□□ 0.84
Col11a2-202ENSMUST00000114252 MecomP14404 1042 aa20.27■□□□□ 0.84
Col11a2-202ENSMUST00000114252 Cep162Q6ZQ06 1403 aa20.26■□□□□ 0.83
Col11a2-202ENSMUST00000114252 Tpm3-rs7D3Z2H9 248 aa20.25■□□□□ 0.83
Col11a2-202ENSMUST00000114252 Ush1cQ9ES64 910 aa20.25■□□□□ 0.83
Col11a2-202ENSMUST00000114252 Cspp1B2RX88 1205 aa20.25■□□□□ 0.83
Col11a2-202ENSMUST00000114252 Map7d2A2AG50 781 aa20.25■□□□□ 0.83
Col11a2-202ENSMUST00000114252 CrebrfQ8CDG5 640 aaKnown RBP20.25■□□□□ 0.83
Col11a2-202ENSMUST00000114252 Trak1Q6PD31 939 aa20.25■□□□□ 0.83
Col11a2-202ENSMUST00000114252 Ecm2Q5FW85 670 aa20.25■□□□□ 0.83
Col11a2-202ENSMUST00000114252 Kif27Q7M6Z4 1394 aa20.24■□□□□ 0.83
Col11a2-202ENSMUST00000114252 Atp6v1dP57746 247 aa20.24■□□□□ 0.83
Col11a2-202ENSMUST00000114252 Rsph3aQ3UFY4 516 aa20.24■□□□□ 0.83
Col11a2-202ENSMUST00000114252 Baz1bQ9Z277 1479 aa20.24■□□□□ 0.83
Col11a2-202ENSMUST00000114252 Mre11Q61216 706 aa20.23■□□□□ 0.83
Col11a2-202ENSMUST00000114252 Ksr2Q3UVC0 959 aa20.23■□□□□ 0.83
Col11a2-202ENSMUST00000114252 Ccar1Q8CH18 1146 aaKnown RBP20.22■□□□□ 0.83
Col11a2-202ENSMUST00000114252 Sycp2Q9CUU3 1500 aa20.22■□□□□ 0.83
Col11a2-202ENSMUST00000114252 Q3TQI7 289 aaKnown RBP20.22■□□□□ 0.83
Col11a2-202ENSMUST00000114252 Fyco1Q8VDC1 1437 aa20.21■□□□□ 0.83
Col11a2-202ENSMUST00000114252 Arhgap35Q91YM2 1499 aa20.21■□□□□ 0.83
Col11a2-202ENSMUST00000114252 Rock2P70336 1388 aa20.2■□□□□ 0.82
Col11a2-202ENSMUST00000114252 Pknox2Q8BG99 474 aa20.19■□□□□ 0.82
Col11a2-202ENSMUST00000114252 Ylpm1Q9R0I7 1386 aaKnown RBP20.18■□□□□ 0.82
Col11a2-202ENSMUST00000114252 Stk26Q99JT2 416 aa20.18■□□□□ 0.82
Col11a2-202ENSMUST00000114252 Ccdc88bQ4QRL3 1481 aa20.17■□□□□ 0.82
Col11a2-202ENSMUST00000114252 Cabp1Q9JLK7 227 aa20.17■□□□□ 0.82
Col11a2-202ENSMUST00000114252 Eif4g2Q62448 906 aaKnown RBP20.16■□□□□ 0.82
Col11a2-202ENSMUST00000114252 Aebp1Q640N1 1128 aa20.16■□□□□ 0.82
Col11a2-202ENSMUST00000114252 Smg6P61406 1418 aaKnown RBP20.16■□□□□ 0.82
Col11a2-202ENSMUST00000114252 Birc3O08863 600 aa20.15■□□□□ 0.82
Col11a2-202ENSMUST00000114252 Tnnt1O88346 262 aa20.15■□□□□ 0.82
Col11a2-202ENSMUST00000114252 Fbxo2Q80UW2 297 aa20.15■□□□□ 0.82
Col11a2-202ENSMUST00000114252 Sf3a1Q8K4Z5 791 aaKnown RBP20.14■□□□□ 0.82
Col11a2-202ENSMUST00000114252 Brpf1B2RRD7 1212 aa20.14■□□□□ 0.81
Col11a2-202ENSMUST00000114252 Cgnl1Q6AW69 1298 aa20.12■□□□□ 0.81
Col11a2-202ENSMUST00000114252 Ccdc146E9Q9F7 977 aa20.11■□□□□ 0.81
Col11a2-202ENSMUST00000114252 Tpm3P21107 285 aaKnown RBP20.11■□□□□ 0.81
Col11a2-202ENSMUST00000114252 Spag9Q58A65 1321 aaKnown RBP20.11■□□□□ 0.81
Col11a2-202ENSMUST00000114252 Senp3Q9EP97 568 aaKnown RBP20.11■□□□□ 0.81
Col11a2-202ENSMUST00000114252 Nol10Q5RJG1 687 aaKnown RBP20.11■□□□□ 0.81
Col11a2-202ENSMUST00000114252 Srcin1Q9QWI6 1250 aa20.11■□□□□ 0.81
Col11a2-202ENSMUST00000114252 Fmn1Q05860 1466 aa20.1■□□□□ 0.81
Col11a2-202ENSMUST00000114252 Ccer1Q9CQL2 403 aa20.1■□□□□ 0.81
Retrieved 100 of 22,080 RNA–protein pairs in 8.2 ms