RNA–Protein interactions for RNA: ENSMUST00000108909.8

Scn8a-204, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 5 BASIC

Gene Scn8a, Length 11,436 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-204ENSMUST00000108909 1700019A02RikA0A087WPV9 146 aa10.18□□□□□ -0.78
Scn8a-204ENSMUST00000108909 Exosc9Q9JHI7 438 aaKnown RBP10.18□□□□□ -0.78
Scn8a-204ENSMUST00000108909 Pes1Q9EQ61 584 aaKnown RBP10.17□□□□□ -0.78
Scn8a-204ENSMUST00000108909 RdxP26043 583 aaKnown RBP10.17□□□□□ -0.78
Scn8a-204ENSMUST00000108909 Trim30aP15533 496 aa10.17□□□□□ -0.78
Scn8a-204ENSMUST00000108909 MccE9PWI3 1003 aa10.16□□□□□ -0.78
Scn8a-204ENSMUST00000108909 Speer4f1Q9D5Q6 258 aa10.16□□□□□ -0.78
Scn8a-204ENSMUST00000108909 PtmsQ9D0J8 101 aaKnown RBP10.16□□□□□ -0.78
Scn8a-204ENSMUST00000108909 Chmp4bQ9D8B3 224 aaKnown RBP10.16□□□□□ -0.78
Scn8a-204ENSMUST00000108909 Cluap1Q8R3P7 413 aa10.16□□□□□ -0.78
Scn8a-204ENSMUST00000108909 4933402E13RikQ9D4D2 429 aa10.15□□□□□ -0.78
Scn8a-204ENSMUST00000108909 CntlnA2AM05 1397 aa10.14□□□□□ -0.79
Scn8a-204ENSMUST00000108909 Plppr3Q7TPB0 716 aa10.14□□□□□ -0.79
Scn8a-204ENSMUST00000108909 Zscan21Q07231 555 aa10.14□□□□□ -0.79
Scn8a-204ENSMUST00000108909 Cnga1P29974 684 aa10.14□□□□□ -0.79
Scn8a-204ENSMUST00000108909 Mroh3A0A1D5RM54 893 aa10.14□□□□□ -0.79
Scn8a-204ENSMUST00000108909 Mtus2Q3UHD3 1353 aa10.14□□□□□ -0.79
Scn8a-204ENSMUST00000108909 Map7d2A2AG50 781 aa10.13□□□□□ -0.79
Scn8a-204ENSMUST00000108909 Mre11Q61216 706 aa10.13□□□□□ -0.79
Scn8a-204ENSMUST00000108909 IqubQ8CDK3 788 aa10.13□□□□□ -0.79
Scn8a-204ENSMUST00000108909 Fhad1A6PWD2 1420 aa10.13□□□□□ -0.79
Scn8a-204ENSMUST00000108909 Smg6P61406 1418 aaKnown RBP10.13□□□□□ -0.79
Scn8a-204ENSMUST00000108909 Rundc1Q0VDN7 615 aa10.13□□□□□ -0.79
Scn8a-204ENSMUST00000108909 Rassf8Q8CJ96 419 aa10.13□□□□□ -0.79
Scn8a-204ENSMUST00000108909 NudcO35685 332 aaKnown RBP10.12□□□□□ -0.79
Scn8a-204ENSMUST00000108909 Srpk2O54781 681 aaKnown RBP10.12□□□□□ -0.79
Scn8a-204ENSMUST00000108909 CgnP59242 1191 aa10.12□□□□□ -0.79
Scn8a-204ENSMUST00000108909 Ipo4Q8VI75 1082 aa10.12□□□□□ -0.79
Scn8a-204ENSMUST00000108909 Gm973E9Q295 1059 aa10.12□□□□□ -0.79
Scn8a-204ENSMUST00000108909 Gm20521D3Z5F7 333 aa10.11□□□□□ -0.79
Scn8a-204ENSMUST00000108909 Ccdc88bQ4QRL3 1481 aa10.11□□□□□ -0.79
Scn8a-204ENSMUST00000108909 Eif2s2Q99L45 331 aaKnown RBP10.1□□□□□ -0.79
Scn8a-204ENSMUST00000108909 Pkd2O35245 966 aa10.1□□□□□ -0.79
Scn8a-204ENSMUST00000108909 Znf330Q922H9 316 aa10.1□□□□□ -0.79
Scn8a-204ENSMUST00000108909 Clstn1Q9EPL2 979 aa10.1□□□□□ -0.79
Scn8a-204ENSMUST00000108909 Baz1bQ9Z277 1479 aa10.09□□□□□ -0.79
Scn8a-204ENSMUST00000108909 Samd1D3YXK1 519 aa10.09□□□□□ -0.79
Scn8a-204ENSMUST00000108909 CrbnQ8C7D2 445 aa10.09□□□□□ -0.79
Scn8a-204ENSMUST00000108909 Sh3bp5Q9Z131 463 aa10.09□□□□□ -0.79
Scn8a-204ENSMUST00000108909 Cald1E9QA15 768 aaKnown RBP10.09□□□□□ -0.79
Scn8a-204ENSMUST00000108909 Rsph3aQ3UFY4 516 aa10.09□□□□□ -0.79
Scn8a-204ENSMUST00000108909 SetQ9EQU5 289 aaKnown RBP10.09□□□□□ -0.79
Scn8a-204ENSMUST00000108909 Tmco5bQ80X59 307 aa10.08□□□□□ -0.8
Scn8a-204ENSMUST00000108909 Tmf1B9EKI3 1091 aa10.08□□□□□ -0.8
Scn8a-204ENSMUST00000108909 Ylpm1Q9R0I7 1386 aaKnown RBP10.07□□□□□ -0.8
Scn8a-204ENSMUST00000108909 Ecm2Q5FW85 670 aa10.07□□□□□ -0.8
Scn8a-204ENSMUST00000108909 HnrnpuQ8VEK3 800 aaKnown RBP10.07□□□□□ -0.8
Scn8a-204ENSMUST00000108909 Rrp9Q91WM3 475 aaKnown RBP10.07□□□□□ -0.8
Scn8a-204ENSMUST00000108909 Rfx1P48377 963 aa10.06□□□□□ -0.8
Scn8a-204ENSMUST00000108909 Cep162Q6ZQ06 1403 aa10.05□□□□□ -0.8
Scn8a-204ENSMUST00000108909 Tomm22Q9CPQ3 142 aa10.05□□□□□ -0.8
Scn8a-204ENSMUST00000108909 Stag3O70576 1240 aa10.05□□□□□ -0.8
Scn8a-204ENSMUST00000108909 Arhgap35Q91YM2 1499 aa10.04□□□□□ -0.8
Scn8a-204ENSMUST00000108909 Anapc15P60007 132 aa10.04□□□□□ -0.8
Scn8a-204ENSMUST00000108909 Pak3Q61036 559 aa10.04□□□□□ -0.8
Scn8a-204ENSMUST00000108909 Ak7Q9D2H2 614 aa10.04□□□□□ -0.8
Scn8a-204ENSMUST00000108909 Golga2Q921M4 999 aa10.04□□□□□ -0.8
Scn8a-204ENSMUST00000108909 Senp3Q9EP97 568 aaKnown RBP10.04□□□□□ -0.8
Scn8a-204ENSMUST00000108909 Iqcf3Q9D498 203 aa10.03□□□□□ -0.8
Scn8a-204ENSMUST00000108909 Cspp1B2RX88 1205 aa10.03□□□□□ -0.8
Scn8a-204ENSMUST00000108909 Ubap1lG3UW59 384 aa10.03□□□□□ -0.8
Scn8a-204ENSMUST00000108909 Rrp7aQ9D1C9 280 aaKnown RBP10.03□□□□□ -0.8
Scn8a-204ENSMUST00000108909 U2surpQ6NV83 1029 aaKnown RBP10.02□□□□□ -0.8
Scn8a-204ENSMUST00000108909 Kif15Q6P9L6 1387 aa10.02□□□□□ -0.81
Scn8a-204ENSMUST00000108909 CrebrfQ8CDG5 640 aaKnown RBP10.02□□□□□ -0.81
Scn8a-204ENSMUST00000108909 U2af1Q9D883 239 aaKnown RBP10.02□□□□□ -0.81
Scn8a-204ENSMUST00000108909 Rbm10Q99KG3 930 aaKnown RBP10.02□□□□□ -0.81
Scn8a-204ENSMUST00000108909 Ubl4bQ9CQ84 188 aa10.01□□□□□ -0.81
Scn8a-204ENSMUST00000108909 Mical1Q8VDP3 1048 aa10.01□□□□□ -0.81
Scn8a-204ENSMUST00000108909 Stk24Q99KH8 431 aa10.01□□□□□ -0.81
Scn8a-204ENSMUST00000108909 Golga4Q91VW5 2238 aa10.01□□□□□ -0.81
Scn8a-204ENSMUST00000108909 Plin1Q8CGN5 517 aa10.01□□□□□ -0.81
Scn8a-204ENSMUST00000108909 Iffo2Q8R2V2 512 aa10.01□□□□□ -0.81
Scn8a-204ENSMUST00000108909 Sf3a1Q8K4Z5 791 aaKnown RBP10□□□□□ -0.81
Scn8a-204ENSMUST00000108909 Fam13bQ8K2H3 851 aa10□□□□□ -0.81
Scn8a-204ENSMUST00000108909 Ksr2Q3UVC0 959 aa10□□□□□ -0.81
Scn8a-204ENSMUST00000108909 Znf710Q3U288 666 aa10□□□□□ -0.81
Scn8a-204ENSMUST00000108909 Taf3Q5HZG4 932 aa10□□□□□ -0.81
Scn8a-204ENSMUST00000108909 Ifit1bl1D3Z6F0 470 aa9.99□□□□□ -0.81
Scn8a-204ENSMUST00000108909 BccipQ9CWI3 316 aa9.99□□□□□ -0.81
Scn8a-204ENSMUST00000108909 Tpm2P58774 284 aa9.99□□□□□ -0.81
Scn8a-204ENSMUST00000108909 Fyco1Q8VDC1 1437 aa9.99□□□□□ -0.81
Scn8a-204ENSMUST00000108909 Mphosph9A6H5Y1 991 aa9.99□□□□□ -0.81
Scn8a-204ENSMUST00000108909 Znf692Q3U381 531 aa9.98□□□□□ -0.81
Scn8a-204ENSMUST00000108909 Utp3Q9JI13 469 aaKnown RBP9.97□□□□□ -0.81
Scn8a-204ENSMUST00000108909 Ccdc146E9Q9F7 977 aa9.97□□□□□ -0.81
Scn8a-204ENSMUST00000108909 R3hcc1Q8BSI6 488 aa9.97□□□□□ -0.81
Scn8a-204ENSMUST00000108909 Gtf2a1Q99PM3 378 aa9.97□□□□□ -0.81
Scn8a-204ENSMUST00000108909 Tpm3-rs7D3Z2H9 248 aa9.97□□□□□ -0.81
Scn8a-204ENSMUST00000108909 NacadQ5SWP3 1504 aa9.96□□□□□ -0.81
Scn8a-204ENSMUST00000108909 Trak1Q6PD31 939 aa9.96□□□□□ -0.81
Scn8a-204ENSMUST00000108909 Paxip1Q6NZQ4 1056 aa9.96□□□□□ -0.81
Scn8a-204ENSMUST00000108909 Pnmal2G3X9N3 661 aa9.96□□□□□ -0.82
Scn8a-204ENSMUST00000108909 Atp6v1dP57746 247 aa9.96□□□□□ -0.82
Scn8a-204ENSMUST00000108909 Dixdc1Q80Y83 711 aa9.96□□□□□ -0.82
Scn8a-204ENSMUST00000108909 Rock2P70336 1388 aa9.96□□□□□ -0.82
Scn8a-204ENSMUST00000108909 Ccar1Q8CH18 1146 aaKnown RBP9.96□□□□□ -0.82
Scn8a-204ENSMUST00000108909 TimelessQ9R1X4 1197 aa9.96□□□□□ -0.82
Scn8a-204ENSMUST00000108909 Ccer1Q9CQL2 403 aa9.95□□□□□ -0.82
Scn8a-204ENSMUST00000108909 Ccdc18Q640L5 1455 aa9.95□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 33.3 ms