RNA–Protein interactions for RNA: ENSMUST00000084885.11

Ubp1-202, Transcript of Upstream-binding protein 1, mousemouse

APPRIS P4 TSL 5 BASIC

Gene Ubp1, Length 3,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-202ENSMUST00000084885 Ift140E9PY46 1464 aa22.31■■□□□ 1.16
Ubp1-202ENSMUST00000084885 Fgd6Q69ZL1 1399 aa22.31■■□□□ 1.16
Ubp1-202ENSMUST00000084885 SafbD3YXK2 937 aaKnown RBP22.31■■□□□ 1.16
Ubp1-202ENSMUST00000084885 TnnQ80Z71 1560 aa22.31■■□□□ 1.16
Ubp1-202ENSMUST00000084885 Wwc2Q6NXJ0 1187 aa22.31■■□□□ 1.16
Ubp1-202ENSMUST00000084885 Gm20521D3Z5F7 333 aa22.3■■□□□ 1.16
Ubp1-202ENSMUST00000084885 Nup155Q99P88 1391 aaKnown RBP22.3■■□□□ 1.16
Ubp1-202ENSMUST00000084885 Nlrp6Q91WS2 869 aa22.28■■□□□ 1.16
Ubp1-202ENSMUST00000084885 Disp1Q3TDN0 1521 aa22.27■■□□□ 1.16
Ubp1-202ENSMUST00000084885 Pcf11G3X9Z4 1553 aa22.27■■□□□ 1.16
Ubp1-202ENSMUST00000084885 Kif21aQ9QXL2 1672 aa22.27■■□□□ 1.16
Ubp1-202ENSMUST00000084885 Map3k5O35099 1380 aa22.26■■□□□ 1.15
Ubp1-202ENSMUST00000084885 Myt1Q8CFC2 1127 aa22.25■■□□□ 1.15
Ubp1-202ENSMUST00000084885 Srpk2O54781 681 aaKnown RBP22.24■■□□□ 1.15
Ubp1-202ENSMUST00000084885 PxdnQ3UQ28 1475 aa22.23■■□□□ 1.15
Ubp1-202ENSMUST00000084885 Tiam1Q60610 1591 aa22.23■■□□□ 1.15
Ubp1-202ENSMUST00000084885 Ncapd3Q6ZQK0 1506 aa22.23■■□□□ 1.15
Ubp1-202ENSMUST00000084885 Dhx57Q6P5D3 1388 aaKnown RBP22.23■■□□□ 1.15
Ubp1-202ENSMUST00000084885 Stk26Q99JT2 416 aa22.22■■□□□ 1.15
Ubp1-202ENSMUST00000084885 Fam71e1A1L3C1 212 aa22.22■■□□□ 1.15
Ubp1-202ENSMUST00000084885 Polr1aO35134 1717 aaKnown RBP22.21■■□□□ 1.15
Ubp1-202ENSMUST00000084885 Polr3glQ8R0C0 218 aa22.19■■□□□ 1.14
Ubp1-202ENSMUST00000084885 Usp47Q8BY87 1376 aa22.19■■□□□ 1.14
Ubp1-202ENSMUST00000084885 Ankrd26Q811D2 1581 aa22.18■■□□□ 1.14
Ubp1-202ENSMUST00000084885 Pla2r1Q62028 1487 aa22.17■■□□□ 1.14
Ubp1-202ENSMUST00000084885 Gm14025A2AP89 1413 aa22.16■■□□□ 1.14
Ubp1-202ENSMUST00000084885 Spag9Q58A65 1321 aaKnown RBP22.14■■□□□ 1.14
Ubp1-202ENSMUST00000084885 Aplp2Q06335 707 aa22.14■■□□□ 1.13
Ubp1-202ENSMUST00000084885 Slx4Q6P1D7 1565 aa22.14■■□□□ 1.13
Ubp1-202ENSMUST00000084885 Gpatch8A2A6A1 1505 aa22.14■■□□□ 1.13
Ubp1-202ENSMUST00000084885 NgefQ8CHT1 710 aa22.12■■□□□ 1.13
Ubp1-202ENSMUST00000084885 UacaQ8CGB3 1411 aa22.11■■□□□ 1.13
Ubp1-202ENSMUST00000084885 Unc13aQ4KUS2 1712 aa22.1■■□□□ 1.13
Ubp1-202ENSMUST00000084885 Mug1P28665 1476 aa22.09■■□□□ 1.13
Ubp1-202ENSMUST00000084885 Stag3O70576 1240 aa22.07■■□□□ 1.12
Ubp1-202ENSMUST00000084885 Fan1Q69ZT1 1020 aa22.07■■□□□ 1.12
Ubp1-202ENSMUST00000084885 NexmifQ5DTT1 1515 aa22.07■■□□□ 1.12
Ubp1-202ENSMUST00000084885 Ttll5Q8CHB8 1328 aa22.07■■□□□ 1.12
Ubp1-202ENSMUST00000084885 Hdac5Q9Z2V6 1113 aa22.06■■□□□ 1.12
Ubp1-202ENSMUST00000084885 TchhA0A0B4J1F9 1599 aa22.06■■□□□ 1.12
Ubp1-202ENSMUST00000084885 Tnnt3Q9QZ47 272 aa22.06■■□□□ 1.12
Ubp1-202ENSMUST00000084885 3425401B19RikD3Z1D3 1412 aa22.06■■□□□ 1.12
Ubp1-202ENSMUST00000084885 WizO88286 1684 aaKnown RBP22.06■■□□□ 1.12
Ubp1-202ENSMUST00000084885 Ncoa2Q61026 1462 aa22.05■■□□□ 1.12
Ubp1-202ENSMUST00000084885 Ncoa3O09000 1398 aa22.05■■□□□ 1.12
Ubp1-202ENSMUST00000084885 Dhx9O70133 1380 aaKnown RBP22.04■■□□□ 1.12
Ubp1-202ENSMUST00000084885 MlecQ6ZQI3 291 aaKnown RBP22.04■■□□□ 1.12
Ubp1-202ENSMUST00000084885 Fhad1A6PWD2 1420 aa22.02■■□□□ 1.12
Ubp1-202ENSMUST00000084885 Fam163aQ8CAA5 168 aa22.02■■□□□ 1.12
Ubp1-202ENSMUST00000084885 Ccdc141E9Q8Q6 1531 aa22.02■■□□□ 1.11
Ubp1-202ENSMUST00000084885 Pde4cQ3UEI1 686 aa22.01■■□□□ 1.11
Ubp1-202ENSMUST00000084885 Znf316Q6PGE4 1016 aa22.01■■□□□ 1.11
Ubp1-202ENSMUST00000084885 A2mQ6GQT1 1474 aa22.01■■□□□ 1.11
Ubp1-202ENSMUST00000084885 Magi3Q9EQJ9 1476 aa22.01■■□□□ 1.11
Ubp1-202ENSMUST00000084885 Exosc9Q9JHI7 438 aaKnown RBP22■■□□□ 1.11
Ubp1-202ENSMUST00000084885 Arhgap5P97393 1501 aa21.99■■□□□ 1.11
Ubp1-202ENSMUST00000084885 Trim26Q99PN3 545 aa21.99■■□□□ 1.11
Ubp1-202ENSMUST00000084885 Gm1043A0A140LJC2 1431 aa21.99■■□□□ 1.11
Ubp1-202ENSMUST00000084885 Exoc6Q8R313 802 aa21.99■■□□□ 1.11
Ubp1-202ENSMUST00000084885 NeflP08551 543 aa21.97■■□□□ 1.11
Ubp1-202ENSMUST00000084885 Bcl11aQ9QYE3 773 aa21.97■■□□□ 1.11
Ubp1-202ENSMUST00000084885 Abcc5Q9R1X5 1436 aa21.96■■□□□ 1.11
Ubp1-202ENSMUST00000084885 IqubQ8CDK3 788 aa21.95■■□□□ 1.1
Ubp1-202ENSMUST00000084885 BC005561E9Q5E2 1589 aa21.94■■□□□ 1.1
Ubp1-202ENSMUST00000084885 Magi1Q6RHR9 1471 aa21.94■■□□□ 1.1
Ubp1-202ENSMUST00000084885 Cwc22Q8C5N3 908 aaKnown RBP21.94■■□□□ 1.1
Ubp1-202ENSMUST00000084885 Arid4bA2CG63 1314 aaKnown RBP21.94■■□□□ 1.1
Ubp1-202ENSMUST00000084885 Txndc2Q6P902 515 aa21.91■■□□□ 1.1
Ubp1-202ENSMUST00000084885 Vps8Q0P5W1 1427 aa21.91■■□□□ 1.1
Ubp1-202ENSMUST00000084885 Neurod2Q62414 383 aa21.91■■□□□ 1.1
Ubp1-202ENSMUST00000084885 Srcin1Q9QWI6 1250 aa21.89■■□□□ 1.1
Ubp1-202ENSMUST00000084885 Naip2Q9QUK4 1447 aa21.89■■□□□ 1.09
Ubp1-202ENSMUST00000084885 Apbb1Q9QXJ1 710 aa21.88■■□□□ 1.09
Ubp1-202ENSMUST00000084885 Ythdc2B2RR83 1445 aaKnown RBP21.88■■□□□ 1.09
Ubp1-202ENSMUST00000084885 Gtf2e1Q9D0D5 440 aa21.87■■□□□ 1.09
Ubp1-202ENSMUST00000084885 Slc4a1apE9PX68 744 aa21.86■■□□□ 1.09
Ubp1-202ENSMUST00000084885 Ofd1Q80Z25 1017 aa21.86■■□□□ 1.09
Ubp1-202ENSMUST00000084885 Shroom2A2ALU4 1481 aa21.86■■□□□ 1.09
Ubp1-202ENSMUST00000084885 Sall3Q62255 1320 aa21.86■■□□□ 1.09
Ubp1-202ENSMUST00000084885 Plin1Q8CGN5 517 aa21.85■■□□□ 1.09
Ubp1-202ENSMUST00000084885 Gm156Q58A37 223 aa21.85■■□□□ 1.09
Ubp1-202ENSMUST00000084885 Senp3Q9EP97 568 aaKnown RBP21.84■■□□□ 1.09
Ubp1-202ENSMUST00000084885 Afap1Q80YS6 731 aa21.83■■□□□ 1.09
Ubp1-202ENSMUST00000084885 Nup160Q9Z0W3 1402 aaKnown RBP21.82■■□□□ 1.08
Ubp1-202ENSMUST00000084885 Sox12Q04890 314 aa21.81■■□□□ 1.08
Ubp1-202ENSMUST00000084885 Irx6Q9ER75 438 aa21.81■■□□□ 1.08
Ubp1-202ENSMUST00000084885 Calr4Q3TQS0 420 aa21.8■■□□□ 1.08
Ubp1-202ENSMUST00000084885 Psme1P97371 249 aa21.79■■□□□ 1.08
Ubp1-202ENSMUST00000084885 Dcaf11Q91VU6 549 aa21.79■■□□□ 1.08
Ubp1-202ENSMUST00000084885 Trappc8E9PWG2 1437 aa21.79■■□□□ 1.08
Ubp1-202ENSMUST00000084885 Dapk1Q80YE7 1442 aa21.79■■□□□ 1.08
Ubp1-202ENSMUST00000084885 Inpp5dQ9ES52 1191 aa21.77■■□□□ 1.08
Ubp1-202ENSMUST00000084885 Atp10dQ8K2X1 1416 aa21.77■■□□□ 1.08
Ubp1-202ENSMUST00000084885 Utp14aQ640M1 767 aaKnown RBP21.77■■□□□ 1.07
Ubp1-202ENSMUST00000084885 Shq1Q7TMX5 569 aa21.77■■□□□ 1.07
Ubp1-202ENSMUST00000084885 4933416C03RikQ3V063 378 aa21.76■■□□□ 1.07
Ubp1-202ENSMUST00000084885 Cd109Q8R422 1442 aa21.76■■□□□ 1.07
Ubp1-202ENSMUST00000084885 Rock2P70336 1388 aa21.76■■□□□ 1.07
Ubp1-202ENSMUST00000084885 Pank3Q8R2W9 370 aa21.75■■□□□ 1.07
Ubp1-202ENSMUST00000084885 Lrriq1Q0P5X1 1673 aa21.75■■□□□ 1.07
Retrieved 100 of 22,080 RNA–protein pairs in 17.6 ms