RNA–Protein interactions for RNA: ENSMUST00000080394.12

Sh3kbp1-202, Transcript of SH3 domain-containing kinase-binding protein 1, mousemouse

TSL 1 (best) BASIC

Gene Sh3kbp1, Length 2,980 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1-202ENSMUST00000080394 Ppp6r1Q7TSI3 856 aa8.78□□□□□ -1
Sh3kbp1-202ENSMUST00000080394 Zcchc11B2RX14 1644 aaKnown RBP8.78□□□□□ -1
Sh3kbp1-202ENSMUST00000080394 WizO88286 1684 aaKnown RBP8.78□□□□□ -1
Sh3kbp1-202ENSMUST00000080394 Abcc2Q8VI47 1543 aa8.77□□□□□ -1.01
Sh3kbp1-202ENSMUST00000080394 Trap1aP19473 224 aa8.77□□□□□ -1.01
Sh3kbp1-202ENSMUST00000080394 Abca5Q8K448 1642 aa8.76□□□□□ -1.01
Sh3kbp1-202ENSMUST00000080394 Carmil1Q6EDY6 1374 aa8.76□□□□□ -1.01
Sh3kbp1-202ENSMUST00000080394 Chd1P40201 1711 aa8.76□□□□□ -1.01
Sh3kbp1-202ENSMUST00000080394 Kdm2aP59997 1161 aa8.75□□□□□ -1.01
Sh3kbp1-202ENSMUST00000080394 Cep162Q6ZQ06 1403 aa8.75□□□□□ -1.01
Sh3kbp1-202ENSMUST00000080394 Fgd6Q69ZL1 1399 aa8.74□□□□□ -1.01
Sh3kbp1-202ENSMUST00000080394 Irf5P56477 497 aa8.74□□□□□ -1.01
Sh3kbp1-202ENSMUST00000080394 Col17a1Q07563 1470 aa8.73□□□□□ -1.01
Sh3kbp1-202ENSMUST00000080394 Ythdc1E9Q5K9 736 aaKnown RBP8.73□□□□□ -1.01
Sh3kbp1-202ENSMUST00000080394 Brd2Q7JJ13 798 aaKnown RBP8.73□□□□□ -1.01
Sh3kbp1-202ENSMUST00000080394 Rpap1Q80TE0 1409 aa8.73□□□□□ -1.01
Sh3kbp1-202ENSMUST00000080394 BC005561E9Q5E2 1589 aa8.72□□□□□ -1.01
Sh3kbp1-202ENSMUST00000080394 1700019A02RikA0A087WPV9 146 aa8.72□□□□□ -1.01
Sh3kbp1-202ENSMUST00000080394 Erich3F6QRE9 1637 aa8.71□□□□□ -1.01
Sh3kbp1-202ENSMUST00000080394 Zfp91Q62511 572 aa8.7□□□□□ -1.02
Sh3kbp1-202ENSMUST00000080394 B4galnt3Q6L8S8 986 aa8.7□□□□□ -1.02
Sh3kbp1-202ENSMUST00000080394 PxdnQ3UQ28 1475 aa8.7□□□□□ -1.02
Sh3kbp1-202ENSMUST00000080394 Zfp777B9EKF4 885 aa8.7□□□□□ -1.02
Sh3kbp1-202ENSMUST00000080394 Slx4Q6P1D7 1565 aa8.7□□□□□ -1.02
Sh3kbp1-202ENSMUST00000080394 Tmed8Q3UHI4 326 aa8.7□□□□□ -1.02
Sh3kbp1-202ENSMUST00000080394 Soga1E1U8D0 1418 aa8.69□□□□□ -1.02
Sh3kbp1-202ENSMUST00000080394 Pabpn1Q8CCS6 302 aaKnown RBP8.69□□□□□ -1.02
Sh3kbp1-202ENSMUST00000080394 Abcc1O35379 1528 aa8.69□□□□□ -1.02
Sh3kbp1-202ENSMUST00000080394 Las1lA2BE28 776 aaKnown RBP8.68□□□□□ -1.02
Sh3kbp1-202ENSMUST00000080394 Arhgef12Q8R4H2 1543 aaKnown RBP8.68□□□□□ -1.02
Sh3kbp1-202ENSMUST00000080394 Ankrd26Q811D2 1581 aa8.67□□□□□ -1.02
Sh3kbp1-202ENSMUST00000080394 Gm7298A0A0N4SVU1 1476 aa8.67□□□□□ -1.02
Sh3kbp1-202ENSMUST00000080394 Cux1P53564 1515 aa8.67□□□□□ -1.02
Sh3kbp1-202ENSMUST00000080394 Rbm25B2RY56 838 aaKnown RBP8.67□□□□□ -1.02
Sh3kbp1-202ENSMUST00000080394 Rrbp1Q99PL5 1605 aaKnown RBP8.67□□□□□ -1.02
Sh3kbp1-202ENSMUST00000080394 CadpsQ80TJ1 1355 aa8.67□□□□□ -1.02
Sh3kbp1-202ENSMUST00000080394 Dnajc5P60904 198 aa8.67□□□□□ -1.02
Sh3kbp1-202ENSMUST00000080394 Clip1Q922J3 1391 aa8.66□□□□□ -1.02
Sh3kbp1-202ENSMUST00000080394 Cep170Q6A065 1588 aa8.66□□□□□ -1.02
Sh3kbp1-202ENSMUST00000080394 Lmo7E9PYF4 1699 aaKnown RBP8.65□□□□□ -1.02
Sh3kbp1-202ENSMUST00000080394 Fyco1Q8VDC1 1437 aa8.65□□□□□ -1.02
Sh3kbp1-202ENSMUST00000080394 1700123L14RikQ3V2K7 440 aa8.64□□□□□ -1.03
Sh3kbp1-202ENSMUST00000080394 Fam50aQ9WV03 339 aaKnown RBP8.64□□□□□ -1.03
Sh3kbp1-202ENSMUST00000080394 Neo1P97798 1493 aa8.63□□□□□ -1.03
Sh3kbp1-202ENSMUST00000080394 Gm13695A2AK44 830 aa8.63□□□□□ -1.03
Sh3kbp1-202ENSMUST00000080394 Zcwpw1Q6IR42 630 aa8.63□□□□□ -1.03
Sh3kbp1-202ENSMUST00000080394 Skida1Q80YR3 822 aa8.63□□□□□ -1.03
Sh3kbp1-202ENSMUST00000080394 Gapvd1Q6PAR5 1458 aa8.63□□□□□ -1.03
Sh3kbp1-202ENSMUST00000080394 Brpf1B2RRD7 1212 aa8.62□□□□□ -1.03
Sh3kbp1-202ENSMUST00000080394 Aebp1Q640N1 1128 aa8.6□□□□□ -1.03
Sh3kbp1-202ENSMUST00000080394 Zeb1Q64318 1117 aa8.6□□□□□ -1.03
Sh3kbp1-202ENSMUST00000080394 Adgrl3Q80TS3 1537 aa8.6□□□□□ -1.03
Sh3kbp1-202ENSMUST00000080394 Kiaa1210E9Q0C6 1637 aa8.59□□□□□ -1.03
Sh3kbp1-202ENSMUST00000080394 Noc3lQ8VI84 807 aaKnown RBP8.59□□□□□ -1.03
Sh3kbp1-202ENSMUST00000080394 Cul7Q8VE73 1689 aa8.59□□□□□ -1.03
Sh3kbp1-202ENSMUST00000080394 Gm14025A2AP89 1413 aa8.59□□□□□ -1.03
Sh3kbp1-202ENSMUST00000080394 Riok3Q9DBU3 519 aaKnown RBP8.58□□□□□ -1.04
Sh3kbp1-202ENSMUST00000080394 TraipQ8VIG6 470 aa8.58□□□□□ -1.04
Sh3kbp1-202ENSMUST00000080394 Peg3Q3URU2 1571 aa8.58□□□□□ -1.04
Sh3kbp1-202ENSMUST00000080394 Setbp1Q9Z180 1582 aa8.58□□□□□ -1.04
Sh3kbp1-202ENSMUST00000080394 AknaQ80VW7 1404 aa8.58□□□□□ -1.04
Sh3kbp1-202ENSMUST00000080394 BlmO88700 1416 aa8.57□□□□□ -1.04
Sh3kbp1-202ENSMUST00000080394 PtprtQ99M80 1454 aa8.57□□□□□ -1.04
Sh3kbp1-202ENSMUST00000080394 Spryd3E9Q9B3 442 aa8.57□□□□□ -1.04
Sh3kbp1-202ENSMUST00000080394 Atf5O70191 283 aa8.57□□□□□ -1.04
Sh3kbp1-202ENSMUST00000080394 Kdm5bQ80Y84 1544 aa8.57□□□□□ -1.04
Sh3kbp1-202ENSMUST00000080394 PtmaP26350 111 aa8.57□□□□□ -1.04
Sh3kbp1-202ENSMUST00000080394 Hmgb1P63158 215 aaKnown RBP8.57□□□□□ -1.04
Sh3kbp1-202ENSMUST00000080394 Ythdc2B2RR83 1445 aaKnown RBP8.56□□□□□ -1.04
Sh3kbp1-202ENSMUST00000080394 NhsB1AV60 1647 aa8.56□□□□□ -1.04
Sh3kbp1-202ENSMUST00000080394 Rapgef6Q5NCJ1 1609 aa8.56□□□□□ -1.04
Sh3kbp1-202ENSMUST00000080394 Gcc2Q8CHG3 1679 aa8.56□□□□□ -1.04
Sh3kbp1-202ENSMUST00000080394 Ppp1r18Q8BQ30 594 aa8.56□□□□□ -1.04
Sh3kbp1-202ENSMUST00000080394 Pprc1Q6NZN1 1644 aa8.56□□□□□ -1.04
Sh3kbp1-202ENSMUST00000080394 AI481877A2ALV5 1481 aa8.56□□□□□ -1.04
Sh3kbp1-202ENSMUST00000080394 Pcf11G3X9Z4 1553 aa8.56□□□□□ -1.04
Sh3kbp1-202ENSMUST00000080394 Arhgap27A2AB59 869 aa8.55□□□□□ -1.04
Sh3kbp1-202ENSMUST00000080394 Anp32bQ9EST5 272 aaKnown RBP8.55□□□□□ -1.04
Sh3kbp1-202ENSMUST00000080394 Arhgef5E9Q7D5 1581 aa8.55□□□□□ -1.04
Sh3kbp1-202ENSMUST00000080394 Hoxd11P23813 323 aa8.53□□□□□ -1.04
Sh3kbp1-202ENSMUST00000080394 Sh3bp1P55194 680 aa8.53□□□□□ -1.04
Sh3kbp1-202ENSMUST00000080394 Rbm10Q99KG3 930 aaKnown RBP8.53□□□□□ -1.04
Sh3kbp1-202ENSMUST00000080394 Ak9G3UYQ4 1894 aa8.53□□□□□ -1.04
Sh3kbp1-202ENSMUST00000080394 Psmd1Q3TXS7 953 aa8.53□□□□□ -1.04
Sh3kbp1-202ENSMUST00000080394 WrnO09053 1401 aa8.53□□□□□ -1.04
Sh3kbp1-202ENSMUST00000080394 Mroh2aD3Z750 1679 aa8.53□□□□□ -1.04
Sh3kbp1-202ENSMUST00000080394 Jph4Q80WT0 628 aa8.52□□□□□ -1.04
Sh3kbp1-202ENSMUST00000080394 Eea1Q8BL66 1411 aa8.52□□□□□ -1.04
Sh3kbp1-202ENSMUST00000080394 Wdr7Q920I9 1489 aa8.52□□□□□ -1.05
Sh3kbp1-202ENSMUST00000080394 Arhgef11Q68FM7 1552 aa8.52□□□□□ -1.05
Sh3kbp1-202ENSMUST00000080394 Ccdc141E9Q8Q6 1531 aa8.52□□□□□ -1.05
Sh3kbp1-202ENSMUST00000080394 Ggt6Q6PDE7 497 aa8.52□□□□□ -1.05
Sh3kbp1-202ENSMUST00000080394 ErmnQ5EBJ4 281 aa8.51□□□□□ -1.05
Sh3kbp1-202ENSMUST00000080394 Ncoa4Q5U4H9 625 aa8.51□□□□□ -1.05
Sh3kbp1-202ENSMUST00000080394 Arap1Q4LDD4 1452 aa8.5□□□□□ -1.05
Sh3kbp1-202ENSMUST00000080394 Ncoa2Q61026 1462 aa8.5□□□□□ -1.05
Sh3kbp1-202ENSMUST00000080394 Cdc42bpaQ3UU96 1719 aa8.5□□□□□ -1.05
Sh3kbp1-202ENSMUST00000080394 Gm156Q58A37 223 aa8.5□□□□□ -1.05
Sh3kbp1-202ENSMUST00000080394 Igf1rQ60751 1373 aa8.49□□□□□ -1.05
Sh3kbp1-202ENSMUST00000080394 WdpcpQ8C456 722 aa8.49□□□□□ -1.05
Retrieved 100 of 22,080 RNA–protein pairs in 248.1 ms