RNA–Protein interactions for RNA: ENSMUST00000080394.12

Sh3kbp1-202, Transcript of SH3 domain-containing kinase-binding protein 1, mousemouse

TSL 1 (best) BASIC

Gene Sh3kbp1, Length 2,980 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1-202ENSMUST00000080394 Gm35339A0A140LHH9 1649 aa12.23□□□□□ -0.45
Sh3kbp1-202ENSMUST00000080394 Ube2uB1AUC4 352 aa12.09□□□□□ -0.47
Sh3kbp1-202ENSMUST00000080394 NischQ80TM9 1593 aa11.9□□□□□ -0.5
Sh3kbp1-202ENSMUST00000080394 Chic1Q8CBW7 227 aa11.68□□□□□ -0.54
Sh3kbp1-202ENSMUST00000080394 Abcc9P70170 1546 aa11.6□□□□□ -0.55
Sh3kbp1-202ENSMUST00000080394 Abcc8B2RUS7 1588 aa11.51□□□□□ -0.57
Sh3kbp1-202ENSMUST00000080394 DiexfQ8BTT6 772 aaKnown RBP11.47□□□□□ -0.57
Sh3kbp1-202ENSMUST00000080394 Ttbk1Q6PCN3 1308 aa11.18□□□□□ -0.62
Sh3kbp1-202ENSMUST00000080394 Ehmt2Q9Z148 1263 aaKnown RBP11.11□□□□□ -0.63
Sh3kbp1-202ENSMUST00000080394 ScribQ80U72 1612 aa11.06□□□□□ -0.64
Sh3kbp1-202ENSMUST00000080394 CatipB9EKE5 520 aa10.89□□□□□ -0.67
Sh3kbp1-202ENSMUST00000080394 Plppr3Q7TPB0 716 aa10.87□□□□□ -0.67
Sh3kbp1-202ENSMUST00000080394 ArxO35085 564 aa10.84□□□□□ -0.67
Sh3kbp1-202ENSMUST00000080394 Mapk8ip2Q9ERE9 830 aa10.77□□□□□ -0.68
Sh3kbp1-202ENSMUST00000080394 Rhox8Q6VSS7 320 aa10.75□□□□□ -0.69
Sh3kbp1-202ENSMUST00000080394 Dcaf1Q80TR8 1506 aa10.74□□□□□ -0.69
Sh3kbp1-202ENSMUST00000080394 NacadQ5SWP3 1504 aa10.7□□□□□ -0.7
Sh3kbp1-202ENSMUST00000080394 Kdm5dQ62240 1548 aa10.67□□□□□ -0.7
Sh3kbp1-202ENSMUST00000080394 Phf23Q8BSN5 401 aa10.56□□□□□ -0.72
Sh3kbp1-202ENSMUST00000080394 Ppargc1bQ8VHJ7 1014 aa10.56□□□□□ -0.72
Sh3kbp1-202ENSMUST00000080394 Ccdc180J3QNE4 1664 aa10.51□□□□□ -0.73
Sh3kbp1-202ENSMUST00000080394 Kcna4Q61423 654 aa10.5□□□□□ -0.73
Sh3kbp1-202ENSMUST00000080394 Sycp2Q9CUU3 1500 aa10.48□□□□□ -0.73
Sh3kbp1-202ENSMUST00000080394 Rb1cc1Q9ESK9 1588 aa10.39□□□□□ -0.75
Sh3kbp1-202ENSMUST00000080394 Bcl11aQ9QYE3 773 aa10.36□□□□□ -0.75
Sh3kbp1-202ENSMUST00000080394 Arid3aQ62431 601 aa10.33□□□□□ -0.76
Sh3kbp1-202ENSMUST00000080394 BicraF8VPZ9 1578 aa10.33□□□□□ -0.76
Sh3kbp1-202ENSMUST00000080394 Crybg2B7ZCC2 1516 aa10.31□□□□□ -0.76
Sh3kbp1-202ENSMUST00000080394 Gab3Q8BSM5 595 aa10.29□□□□□ -0.76
Sh3kbp1-202ENSMUST00000080394 Baz1aO88379 1555 aa10.29□□□□□ -0.76
Sh3kbp1-202ENSMUST00000080394 UbtfP25976 765 aaKnown RBP10.26□□□□□ -0.77
Sh3kbp1-202ENSMUST00000080394 Slc4a1apE9PX68 744 aa10.22□□□□□ -0.77
Sh3kbp1-202ENSMUST00000080394 Prdm16A2A935 1275 aa10.21□□□□□ -0.77
Sh3kbp1-202ENSMUST00000080394 Amer1Q7TS75 1132 aa10.2□□□□□ -0.78
Sh3kbp1-202ENSMUST00000080394 Aplp2Q06335 707 aa10.13□□□□□ -0.79
Sh3kbp1-202ENSMUST00000080394 Taok2Q6ZQ29 1240 aa10.12□□□□□ -0.79
Sh3kbp1-202ENSMUST00000080394 Q8BT18 775 aa10.06□□□□□ -0.8
Sh3kbp1-202ENSMUST00000080394 Prdm10Q3UTQ7 1184 aa10.05□□□□□ -0.8
Sh3kbp1-202ENSMUST00000080394 Rtl1Q7M732 1744 aa10.04□□□□□ -0.8
Sh3kbp1-202ENSMUST00000080394 Smarca2Q6DIC0 1577 aa10.02□□□□□ -0.81
Sh3kbp1-202ENSMUST00000080394 Fam71e1A1L3C1 212 aa10□□□□□ -0.81
Sh3kbp1-202ENSMUST00000080394 Vsig10D3YX43 558 aa9.99□□□□□ -0.81
Sh3kbp1-202ENSMUST00000080394 Ncbp3Q8BZR9 615 aaKnown RBP9.98□□□□□ -0.81
Sh3kbp1-202ENSMUST00000080394 Pds5bQ4VA53 1446 aaKnown RBP9.97□□□□□ -0.81
Sh3kbp1-202ENSMUST00000080394 Zcchc6Q5BLK4 1491 aaKnown RBP9.94□□□□□ -0.82
Sh3kbp1-202ENSMUST00000080394 Thoc2B1AZI6 1594 aaKnown RBP9.93□□□□□ -0.82
Sh3kbp1-202ENSMUST00000080394 Atad2bE9Q166 1460 aaKnown RBP9.91□□□□□ -0.82
Sh3kbp1-202ENSMUST00000080394 Smarca4Q3TKT4 1613 aaKnown RBP9.9□□□□□ -0.82
Sh3kbp1-202ENSMUST00000080394 Rsph4aQ8BYM7 716 aa9.9□□□□□ -0.83
Sh3kbp1-202ENSMUST00000080394 Senp3Q9EP97 568 aaKnown RBP9.9□□□□□ -0.83
Sh3kbp1-202ENSMUST00000080394 Iqgap2Q3UQ44 1575 aa9.81□□□□□ -0.84
Sh3kbp1-202ENSMUST00000080394 Cecr2E9Q2Z1 1453 aa9.81□□□□□ -0.84
Sh3kbp1-202ENSMUST00000080394 Gtf3c5Q8R2T8 520 aa9.78□□□□□ -0.84
Sh3kbp1-202ENSMUST00000080394 Npm2Q80W85 207 aa9.76□□□□□ -0.85
Sh3kbp1-202ENSMUST00000080394 Ercc6F8VPZ5 1481 aa9.73□□□□□ -0.85
Sh3kbp1-202ENSMUST00000080394 Wdr62Q3U3T8 1523 aa9.73□□□□□ -0.85
Sh3kbp1-202ENSMUST00000080394 Cttnbp2B9EJA2 1648 aa9.72□□□□□ -0.85
Sh3kbp1-202ENSMUST00000080394 Fam135aQ6NS59 1506 aa9.72□□□□□ -0.85
Sh3kbp1-202ENSMUST00000080394 Baz1bQ9Z277 1479 aa9.71□□□□□ -0.85
Sh3kbp1-202ENSMUST00000080394 Myt1Q8CFC2 1127 aa9.71□□□□□ -0.85
Sh3kbp1-202ENSMUST00000080394 PrkcshO08795 521 aa9.7□□□□□ -0.86
Sh3kbp1-202ENSMUST00000080394 Cc2d2aQ8CFW7 1633 aa9.69□□□□□ -0.86
Sh3kbp1-202ENSMUST00000080394 Unc13aQ4KUS2 1712 aa9.68□□□□□ -0.86
Sh3kbp1-202ENSMUST00000080394 Ripply1Q2WG77 201 aa9.68□□□□□ -0.86
Sh3kbp1-202ENSMUST00000080394 TimelessQ9R1X4 1197 aa9.67□□□□□ -0.86
Sh3kbp1-202ENSMUST00000080394 Frmpd1A2AKB4 1549 aa9.67□□□□□ -0.86
Sh3kbp1-202ENSMUST00000080394 Pelp1Q9DBD5 1123 aaKnown RBP9.67□□□□□ -0.86
Sh3kbp1-202ENSMUST00000080394 Synj1Q8CHC4 1574 aa9.66□□□□□ -0.86
Sh3kbp1-202ENSMUST00000080394 CftrP26361 1476 aa9.65□□□□□ -0.86
Sh3kbp1-202ENSMUST00000080394 Eif5bQ05D44 1216 aaKnown RBP9.65□□□□□ -0.87
Sh3kbp1-202ENSMUST00000080394 Brd4Q9ESU6 1400 aaKnown RBP9.64□□□□□ -0.87
Sh3kbp1-202ENSMUST00000080394 Ecm2Q5FW85 670 aa9.64□□□□□ -0.87
Sh3kbp1-202ENSMUST00000080394 Dnajc5bQ9CQ94 199 aa9.63□□□□□ -0.87
Sh3kbp1-202ENSMUST00000080394 BccipQ9CWI3 316 aa9.63□□□□□ -0.87
Sh3kbp1-202ENSMUST00000080394 4930567H17RikQ3V0K5 233 aa9.63□□□□□ -0.87
Sh3kbp1-202ENSMUST00000080394 Phldb1Q6PDH0 1371 aaKnown RBP9.56□□□□□ -0.88
Sh3kbp1-202ENSMUST00000080394 Os9Q8K2C7 672 aa9.52□□□□□ -0.88
Sh3kbp1-202ENSMUST00000080394 HrcG5E8J6 738 aa9.46□□□□□ -0.9
Sh3kbp1-202ENSMUST00000080394 Top2bQ64511 1612 aa9.45□□□□□ -0.9
Sh3kbp1-202ENSMUST00000080394 Pde4cQ3UEI1 686 aa9.44□□□□□ -0.9
Sh3kbp1-202ENSMUST00000080394 Tshz2Q68FE9 1030 aa9.44□□□□□ -0.9
Sh3kbp1-202ENSMUST00000080394 Lamc3Q9R0B6 1581 aa9.42□□□□□ -0.9
Sh3kbp1-202ENSMUST00000080394 Plcd4Q8K3R3 807 aa9.42□□□□□ -0.9
Sh3kbp1-202ENSMUST00000080394 Trim41Q5NCC3 630 aa9.42□□□□□ -0.9
Sh3kbp1-202ENSMUST00000080394 Ccdc136Q3TVA9 1136 aa9.41□□□□□ -0.9
Sh3kbp1-202ENSMUST00000080394 AcrbpQ3V140 540 aa9.41□□□□□ -0.9
Sh3kbp1-202ENSMUST00000080394 Mrc2Q64449 1479 aa9.4□□□□□ -0.9
Sh3kbp1-202ENSMUST00000080394 TnnQ80Z71 1560 aa9.4□□□□□ -0.9
Sh3kbp1-202ENSMUST00000080394 Ube2q2Q8K2Z8 378 aa9.38□□□□□ -0.91
Sh3kbp1-202ENSMUST00000080394 Znf326O88291 580 aa9.35□□□□□ -0.91
Sh3kbp1-202ENSMUST00000080394 Golga3P55937 1487 aa9.35□□□□□ -0.91
Sh3kbp1-202ENSMUST00000080394 Igsf3Q6ZQA6 1194 aa9.34□□□□□ -0.91
Sh3kbp1-202ENSMUST00000080394 Zbtb7cQ8VCZ7 619 aa9.34□□□□□ -0.91
Sh3kbp1-202ENSMUST00000080394 Rsf1E9PWW9 1441 aaKnown RBP9.33□□□□□ -0.92
Sh3kbp1-202ENSMUST00000080394 Ubl4bQ9CQ84 188 aa9.33□□□□□ -0.92
Sh3kbp1-202ENSMUST00000080394 Esf1Q3V1V3 845 aaKnown RBP9.33□□□□□ -0.92
Sh3kbp1-202ENSMUST00000080394 CenpbP27790 599 aa9.32□□□□□ -0.92
Sh3kbp1-202ENSMUST00000080394 Dmrt2Q8BG36 561 aa9.3□□□□□ -0.92
Sh3kbp1-202ENSMUST00000080394 Kif21aQ9QXL2 1672 aa9.26□□□□□ -0.93
Sh3kbp1-202ENSMUST00000080394 Rtn4Q99P72 1162 aaKnown RBP9.26□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 173.1 ms