RNA–Protein interactions for RNA: ENSMUST00000078886.9

Spen-201, Transcript of Msx2-interacting protein, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Spen, Length 12,082 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Spen-201ENSMUST00000078886 Chmp5Q9D7S9 219 aa10.3□□□□□ -0.76
Spen-201ENSMUST00000078886 Exosc9Q9JHI7 438 aaKnown RBP10.3□□□□□ -0.76
Spen-201ENSMUST00000078886 Dusp9Q7TNL7 452 aa10.29□□□□□ -0.76
Spen-201ENSMUST00000078886 Gm6268A2A3U9 297 aa10.29□□□□□ -0.76
Spen-201ENSMUST00000078886 Srpk2O54781 681 aaKnown RBP10.28□□□□□ -0.76
Spen-201ENSMUST00000078886 Rassf8Q8CJ96 419 aa10.28□□□□□ -0.76
Spen-201ENSMUST00000078886 Tpm3-rs7D3Z2H9 248 aa10.28□□□□□ -0.76
Spen-201ENSMUST00000078886 Tpm3P21107 285 aaKnown RBP10.28□□□□□ -0.76
Spen-201ENSMUST00000078886 Ush1cQ9ES64 910 aa10.27□□□□□ -0.76
Spen-201ENSMUST00000078886 Znf771Q8BJ90 317 aa10.27□□□□□ -0.77
Spen-201ENSMUST00000078886 CgnP59242 1191 aa10.27□□□□□ -0.77
Spen-201ENSMUST00000078886 Slc4a1apE9PX68 744 aa10.27□□□□□ -0.77
Spen-201ENSMUST00000078886 Sh3bp5Q9Z131 463 aa10.27□□□□□ -0.77
Spen-201ENSMUST00000078886 Gm20521D3Z5F7 333 aa10.27□□□□□ -0.77
Spen-201ENSMUST00000078886 Iqcf3Q9D498 203 aa10.27□□□□□ -0.77
Spen-201ENSMUST00000078886 Mroh3A0A1D5RM54 893 aa10.27□□□□□ -0.77
Spen-201ENSMUST00000078886 Mex3cQ05A36 652 aaKnown RBP10.27□□□□□ -0.77
Spen-201ENSMUST00000078886 EspnQ9ET47 871 aa10.27□□□□□ -0.77
Spen-201ENSMUST00000078886 Tomm22Q9CPQ3 142 aa10.26□□□□□ -0.77
Spen-201ENSMUST00000078886 Arid4aF8VPQ2 1261 aaKnown RBP10.25□□□□□ -0.77
Spen-201ENSMUST00000078886 BbxQ8VBW5 907 aa10.24□□□□□ -0.77
Spen-201ENSMUST00000078886 Cspp1B2RX88 1205 aa10.24□□□□□ -0.77
Spen-201ENSMUST00000078886 Znf526Q8BI66 675 aa10.23□□□□□ -0.77
Spen-201ENSMUST00000078886 HnrnpuQ8VEK3 800 aaKnown RBP10.23□□□□□ -0.77
Spen-201ENSMUST00000078886 Zfp777B9EKF4 885 aa10.23□□□□□ -0.77
Spen-201ENSMUST00000078886 Ipo4Q8VI75 1082 aa10.23□□□□□ -0.77
Spen-201ENSMUST00000078886 Safb2Q80YR5 991 aaKnown RBP10.23□□□□□ -0.77
Spen-201ENSMUST00000078886 Eea1Q8BL66 1411 aa10.23□□□□□ -0.77
Spen-201ENSMUST00000078886 Samd1D3YXK1 519 aa10.23□□□□□ -0.77
Spen-201ENSMUST00000078886 Ubl4bQ9CQ84 188 aa10.22□□□□□ -0.77
Spen-201ENSMUST00000078886 R3hcc1Q8BSI6 488 aa10.22□□□□□ -0.77
Spen-201ENSMUST00000078886 1700019A02RikA0A087WPV9 146 aa10.2□□□□□ -0.78
Spen-201ENSMUST00000078886 CrebrfQ8CDG5 640 aaKnown RBP10.2□□□□□ -0.78
Spen-201ENSMUST00000078886 Ipo8Q7TMY7 1010 aa10.2□□□□□ -0.78
Spen-201ENSMUST00000078886 Iffo2Q8R2V2 512 aa10.2□□□□□ -0.78
Spen-201ENSMUST00000078886 Mical1Q8VDP3 1048 aa10.19□□□□□ -0.78
Spen-201ENSMUST00000078886 Ccdc34Q3UI66 367 aa10.19□□□□□ -0.78
Spen-201ENSMUST00000078886 Plcd4Q8K3R3 807 aa10.18□□□□□ -0.78
Spen-201ENSMUST00000078886 Mia2Q91ZV0 1396 aa10.18□□□□□ -0.78
Spen-201ENSMUST00000078886 Taf3Q5HZG4 932 aa10.17□□□□□ -0.78
Spen-201ENSMUST00000078886 Pde3bQ61409 1100 aa10.17□□□□□ -0.78
Spen-201ENSMUST00000078886 Exoc6Q8R313 802 aa10.17□□□□□ -0.78
Spen-201ENSMUST00000078886 Speer4f1Q9D5Q6 258 aa10.16□□□□□ -0.78
Spen-201ENSMUST00000078886 Drc7Q6V3W6 876 aa10.16□□□□□ -0.78
Spen-201ENSMUST00000078886 Stag3O70576 1240 aa10.16□□□□□ -0.78
Spen-201ENSMUST00000078886 Zscan21Q07231 555 aa10.15□□□□□ -0.78
Spen-201ENSMUST00000078886 Zrsr2Q62377 462 aaKnown RBP10.15□□□□□ -0.78
Spen-201ENSMUST00000078886 Mfap1aC0HKD8 439 aaKnown RBP10.15□□□□□ -0.78
Spen-201ENSMUST00000078886 Mfap1bC0HKD9 439 aaKnown RBP10.15□□□□□ -0.78
Spen-201ENSMUST00000078886 AppP12023 770 aa10.15□□□□□ -0.78
Spen-201ENSMUST00000078886 Hspa5P20029 655 aaKnown RBP10.15□□□□□ -0.78
Spen-201ENSMUST00000078886 Isy1Q69ZQ2 285 aaKnown RBP10.15□□□□□ -0.79
Spen-201ENSMUST00000078886 Fam193aQ8CGI1 1231 aaKnown RBP10.15□□□□□ -0.79
Spen-201ENSMUST00000078886 Pnmal2G3X9N3 661 aa10.14□□□□□ -0.79
Spen-201ENSMUST00000078886 Sart3Q9JLI8 962 aaKnown RBP10.14□□□□□ -0.79
Spen-201ENSMUST00000078886 ChgaP26339 463 aaKnown RBP10.14□□□□□ -0.79
Spen-201ENSMUST00000078886 Mtus2Q3UHD3 1353 aa10.14□□□□□ -0.79
Spen-201ENSMUST00000078886 Pdcl3Q8BVF2 240 aa10.14□□□□□ -0.79
Spen-201ENSMUST00000078886 Cwc15Q9JHS9 229 aaKnown RBP10.14□□□□□ -0.79
Spen-201ENSMUST00000078886 Ubap1lG3UW59 384 aa10.13□□□□□ -0.79
Spen-201ENSMUST00000078886 Anp32eP97822 260 aaKnown RBP10.13□□□□□ -0.79
Spen-201ENSMUST00000078886 Rrp7aQ9D1C9 280 aaKnown RBP10.13□□□□□ -0.79
Spen-201ENSMUST00000078886 GorabQ8BRM2 368 aa10.13□□□□□ -0.79
Spen-201ENSMUST00000078886 Sf3a1Q8K4Z5 791 aaKnown RBP10.12□□□□□ -0.79
Spen-201ENSMUST00000078886 Rsph6aQ8CDR2 708 aa10.12□□□□□ -0.79
Spen-201ENSMUST00000078886 Fam43aQ8BUP8 424 aa10.11□□□□□ -0.79
Spen-201ENSMUST00000078886 Mrvi1Q9WUX5 899 aaKnown RBP10.11□□□□□ -0.79
Spen-201ENSMUST00000078886 Znhit6Q3UFB2 460 aaKnown RBP10.11□□□□□ -0.79
Spen-201ENSMUST00000078886 Ralbp1Q62172 648 aa10.11□□□□□ -0.79
Spen-201ENSMUST00000078886 Fhad1A6PWD2 1420 aa10.11□□□□□ -0.79
Spen-201ENSMUST00000078886 Rundc1Q0VDN7 615 aa10.11□□□□□ -0.79
Spen-201ENSMUST00000078886 Tmco5bQ80X59 307 aa10.11□□□□□ -0.79
Spen-201ENSMUST00000078886 Cnga1P29974 684 aa10.1□□□□□ -0.79
Spen-201ENSMUST00000078886 Ccer1Q9CQL2 403 aa10.1□□□□□ -0.79
Spen-201ENSMUST00000078886 TimelessQ9R1X4 1197 aa10.1□□□□□ -0.79
Spen-201ENSMUST00000078886 Tmf1B9EKI3 1091 aa10.1□□□□□ -0.79
Spen-201ENSMUST00000078886 Smarce1O54941 411 aaKnown RBP10.1□□□□□ -0.79
Spen-201ENSMUST00000078886 Cluap1Q8R3P7 413 aa10.1□□□□□ -0.79
Spen-201ENSMUST00000078886 Stk24Q99KH8 431 aa10.1□□□□□ -0.79
Spen-201ENSMUST00000078886 Golga3P55937 1487 aa10.09□□□□□ -0.79
Spen-201ENSMUST00000078886 Fam13bQ8K2H3 851 aa10.09□□□□□ -0.79
Spen-201ENSMUST00000078886 Rsph3aQ3UFY4 516 aa10.09□□□□□ -0.79
Spen-201ENSMUST00000078886 Def6Q8C2K1 630 aa10.08□□□□□ -0.8
Spen-201ENSMUST00000078886 Nolc1E9Q5C9 702 aaKnown RBP10.08□□□□□ -0.8
Spen-201ENSMUST00000078886 Tpm1P58771 284 aa10.08□□□□□ -0.8
Spen-201ENSMUST00000078886 Rtf1A2AQ19 715 aaKnown RBP10.08□□□□□ -0.8
Spen-201ENSMUST00000078886 Atp6v1dP57746 247 aa10.08□□□□□ -0.8
Spen-201ENSMUST00000078886 U2surpQ6NV83 1029 aaKnown RBP10.08□□□□□ -0.8
Spen-201ENSMUST00000078886 Rufy1Q8BIJ7 712 aa10.08□□□□□ -0.8
Spen-201ENSMUST00000078886 Tpd52l1O54818 204 aa10.07□□□□□ -0.8
Spen-201ENSMUST00000078886 NgefQ8CHT1 710 aa10.07□□□□□ -0.8
Spen-201ENSMUST00000078886 Trim55G3X8Y1 545 aa10.07□□□□□ -0.8
Spen-201ENSMUST00000078886 Ccar1Q8CH18 1146 aaKnown RBP10.06□□□□□ -0.8
Spen-201ENSMUST00000078886 Golga2Q921M4 999 aa10.06□□□□□ -0.8
Spen-201ENSMUST00000078886 A0A0U1RNP2 1173 aa10.06□□□□□ -0.8
Spen-201ENSMUST00000078886 Ipo7Q9EPL8 1038 aaKnown RBP10.06□□□□□ -0.8
Spen-201ENSMUST00000078886 Dctn1O08788 1281 aa10.06□□□□□ -0.8
Spen-201ENSMUST00000078886 Baz1aO88379 1555 aa10.06□□□□□ -0.8
Spen-201ENSMUST00000078886 Sin3aQ60520 1274 aaKnown RBP10.06□□□□□ -0.8
Spen-201ENSMUST00000078886 Pkd2O35245 966 aa10.06□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 10.8 ms