RNA–Protein interactions for RNA: ENSMUST00000074002.11

Ube3b-201, Transcript of Ubiquitin-protein ligase E3B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ube3b, Length 5,194 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3b-201ENSMUST00000074002 Pknox2Q8BG99 474 aa18.31■□□□□ 0.52
Ube3b-201ENSMUST00000074002 Nolc1E9Q5C9 702 aaKnown RBP18.3■□□□□ 0.52
Ube3b-201ENSMUST00000074002 Ncoa2Q61026 1462 aa18.29■□□□□ 0.52
Ube3b-201ENSMUST00000074002 Gtf3c3Q3TMP1 882 aa18.29■□□□□ 0.52
Ube3b-201ENSMUST00000074002 Trak1Q6PD31 939 aa18.29■□□□□ 0.52
Ube3b-201ENSMUST00000074002 Card11Q8CIS0 1159 aa18.28■□□□□ 0.52
Ube3b-201ENSMUST00000074002 Ankrd26Q811D2 1581 aa18.28■□□□□ 0.52
Ube3b-201ENSMUST00000074002 Cc2d2bA0A286YDU8 1405 aa18.28■□□□□ 0.52
Ube3b-201ENSMUST00000074002 Arid3cA6PWV5 409 aa18.26■□□□□ 0.51
Ube3b-201ENSMUST00000074002 P3h3Q8CG70 732 aa18.26■□□□□ 0.51
Ube3b-201ENSMUST00000074002 Grin2aP35436 1464 aa18.26■□□□□ 0.51
Ube3b-201ENSMUST00000074002 ArxO35085 564 aa18.25■□□□□ 0.51
Ube3b-201ENSMUST00000074002 Cwc22Q8C5N3 908 aaKnown RBP18.25■□□□□ 0.51
Ube3b-201ENSMUST00000074002 Mroh3A0A1D5RM54 893 aa18.25■□□□□ 0.51
Ube3b-201ENSMUST00000074002 Vps8Q0P5W1 1427 aa18.25■□□□□ 0.51
Ube3b-201ENSMUST00000074002 Prdm10Q3UTQ7 1184 aa18.22■□□□□ 0.51
Ube3b-201ENSMUST00000074002 Nup155Q99P88 1391 aaKnown RBP18.22■□□□□ 0.51
Ube3b-201ENSMUST00000074002 Arhgap31A6X8Z5 1425 aa18.22■□□□□ 0.51
Ube3b-201ENSMUST00000074002 Soga1E1U8D0 1418 aa18.22■□□□□ 0.51
Ube3b-201ENSMUST00000074002 Tdrd9Q14BI7 1383 aa18.21■□□□□ 0.51
Ube3b-201ENSMUST00000074002 Sin3aQ60520 1274 aaKnown RBP18.21■□□□□ 0.51
Ube3b-201ENSMUST00000074002 Nlrp6Q91WS2 869 aa18.2■□□□□ 0.5
Ube3b-201ENSMUST00000074002 Sart1Q9Z315 806 aaKnown RBP18.2■□□□□ 0.5
Ube3b-201ENSMUST00000074002 Ankrd36D3Z4K0 1415 aa18.2■□□□□ 0.5
Ube3b-201ENSMUST00000074002 TchhA0A0B4J1F9 1599 aa18.19■□□□□ 0.5
Ube3b-201ENSMUST00000074002 Kdm2aP59997 1161 aa18.18■□□□□ 0.5
Ube3b-201ENSMUST00000074002 Samd9lQ69Z37 1561 aa18.16■□□□□ 0.5
Ube3b-201ENSMUST00000074002 Fgd6Q69ZL1 1399 aa18.16■□□□□ 0.5
Ube3b-201ENSMUST00000074002 Plppr3Q7TPB0 716 aa18.15■□□□□ 0.5
Ube3b-201ENSMUST00000074002 Lemd3Q9WU40 921 aa18.15■□□□□ 0.5
Ube3b-201ENSMUST00000074002 Slx4Q6P1D7 1565 aa18.14■□□□□ 0.49
Ube3b-201ENSMUST00000074002 Slc4a3P16283 1227 aa18.14■□□□□ 0.49
Ube3b-201ENSMUST00000074002 Gm13695A2AK44 830 aa18.14■□□□□ 0.49
Ube3b-201ENSMUST00000074002 Rundc1Q0VDN7 615 aa18.13■□□□□ 0.49
Ube3b-201ENSMUST00000074002 Plcd4Q8K3R3 807 aa18.13■□□□□ 0.49
Ube3b-201ENSMUST00000074002 Usp47Q8BY87 1376 aa18.13■□□□□ 0.49
Ube3b-201ENSMUST00000074002 Stk24Q99KH8 431 aa18.1■□□□□ 0.49
Ube3b-201ENSMUST00000074002 CanxP35564 591 aaKnown RBP18.09■□□□□ 0.49
Ube3b-201ENSMUST00000074002 Taok2Q6ZQ29 1240 aa18.09■□□□□ 0.49
Ube3b-201ENSMUST00000074002 Kif21aQ9QXL2 1672 aa18.09■□□□□ 0.49
Ube3b-201ENSMUST00000074002 Srpk2O54781 681 aaKnown RBP18.08■□□□□ 0.49
Ube3b-201ENSMUST00000074002 Fam163aQ8CAA5 168 aa18.08■□□□□ 0.49
Ube3b-201ENSMUST00000074002 Ccdc141E9Q8Q6 1531 aa18.08■□□□□ 0.49
Ube3b-201ENSMUST00000074002 Disp1Q3TDN0 1521 aa18.08■□□□□ 0.48
Ube3b-201ENSMUST00000074002 Pla2r1Q62028 1487 aa18.08■□□□□ 0.48
Ube3b-201ENSMUST00000074002 Gm20521D3Z5F7 333 aa18.08■□□□□ 0.48
Ube3b-201ENSMUST00000074002 NexmifQ5DTT1 1515 aa18.08■□□□□ 0.48
Ube3b-201ENSMUST00000074002 Eif4g1Q6NZJ6 1600 aaKnown RBP18.07■□□□□ 0.48
Ube3b-201ENSMUST00000074002 Gpatch8A2A6A1 1505 aa18.07■□□□□ 0.48
Ube3b-201ENSMUST00000074002 Mug1P28665 1476 aa18.07■□□□□ 0.48
Ube3b-201ENSMUST00000074002 Zfp644E9QA22 1323 aa18.06■□□□□ 0.48
Ube3b-201ENSMUST00000074002 Naip2Q9QUK4 1447 aa18.05■□□□□ 0.48
Ube3b-201ENSMUST00000074002 Unc13aQ4KUS2 1712 aa18.05■□□□□ 0.48
Ube3b-201ENSMUST00000074002 Ifit1bl1D3Z6F0 470 aa18.03■□□□□ 0.48
Ube3b-201ENSMUST00000074002 Kif3bQ61771 747 aa18.03■□□□□ 0.48
Ube3b-201ENSMUST00000074002 Pabpn1Q8CCS6 302 aaKnown RBP18.02■□□□□ 0.48
Ube3b-201ENSMUST00000074002 A2mQ6GQT1 1474 aa18.02■□□□□ 0.47
Ube3b-201ENSMUST00000074002 Gm1043A0A140LJC2 1431 aa18.01■□□□□ 0.47
Ube3b-201ENSMUST00000074002 Gm14025A2AP89 1413 aa18.01■□□□□ 0.47
Ube3b-201ENSMUST00000074002 Ppp1r18Q8BQ30 594 aa18.01■□□□□ 0.47
Ube3b-201ENSMUST00000074002 Spag9Q58A65 1321 aaKnown RBP17.99■□□□□ 0.47
Ube3b-201ENSMUST00000074002 Neo1P97798 1493 aa17.99■□□□□ 0.47
Ube3b-201ENSMUST00000074002 Erich3F6QRE9 1637 aa17.99■□□□□ 0.47
Ube3b-201ENSMUST00000074002 Wwc2Q6NXJ0 1187 aa17.99■□□□□ 0.47
Ube3b-201ENSMUST00000074002 Rad21Q61550 635 aaKnown RBP17.99■□□□□ 0.47
Ube3b-201ENSMUST00000074002 Safb2Q80YR5 991 aaKnown RBP17.97■□□□□ 0.47
Ube3b-201ENSMUST00000074002 Magi1Q6RHR9 1471 aa17.97■□□□□ 0.47
Ube3b-201ENSMUST00000074002 WizO88286 1684 aaKnown RBP17.97■□□□□ 0.47
Ube3b-201ENSMUST00000074002 Il16O54824 1322 aa17.96■□□□□ 0.47
Ube3b-201ENSMUST00000074002 IqubQ8CDK3 788 aa17.96■□□□□ 0.47
Ube3b-201ENSMUST00000074002 PxdnQ3UQ28 1475 aa17.96■□□□□ 0.47
Ube3b-201ENSMUST00000074002 3425401B19RikD3Z1D3 1412 aa17.96■□□□□ 0.46
Ube3b-201ENSMUST00000074002 Arhgap5P97393 1501 aa17.95■□□□□ 0.46
Ube3b-201ENSMUST00000074002 Abcc5Q9R1X5 1436 aa17.93■□□□□ 0.46
Ube3b-201ENSMUST00000074002 Magi3Q9EQJ9 1476 aa17.93■□□□□ 0.46
Ube3b-201ENSMUST00000074002 Ythdc1E9Q5K9 736 aaKnown RBP17.93■□□□□ 0.46
Ube3b-201ENSMUST00000074002 Ipo9Q91YE6 1041 aa17.93■□□□□ 0.46
Ube3b-201ENSMUST00000074002 Ofd1Q80Z25 1017 aa17.92■□□□□ 0.46
Ube3b-201ENSMUST00000074002 Lmod3E9QA62 571 aa17.9■□□□□ 0.46
Ube3b-201ENSMUST00000074002 Exoc6Q8R313 802 aa17.9■□□□□ 0.46
Ube3b-201ENSMUST00000074002 Prdm16A2A935 1275 aa17.89■□□□□ 0.45
Ube3b-201ENSMUST00000074002 BC005561E9Q5E2 1589 aa17.89■□□□□ 0.45
Ube3b-201ENSMUST00000074002 Ncoa3O09000 1398 aa17.89■□□□□ 0.45
Ube3b-201ENSMUST00000074002 Rtn4Q99P72 1162 aaKnown RBP17.88■□□□□ 0.45
Ube3b-201ENSMUST00000074002 Ttll5Q8CHB8 1328 aa17.88■□□□□ 0.45
Ube3b-201ENSMUST00000074002 Stag3O70576 1240 aa17.87■□□□□ 0.45
Ube3b-201ENSMUST00000074002 Dapk1Q80YE7 1442 aa17.86■□□□□ 0.45
Ube3b-201ENSMUST00000074002 Nup160Q9Z0W3 1402 aaKnown RBP17.86■□□□□ 0.45
Ube3b-201ENSMUST00000074002 Rock2P70336 1388 aa17.86■□□□□ 0.45
Ube3b-201ENSMUST00000074002 AU015836B2RUM3 263 aa17.85■□□□□ 0.45
Ube3b-201ENSMUST00000074002 Polr3glQ8R0C0 218 aa17.85■□□□□ 0.45
Ube3b-201ENSMUST00000074002 Rfx7F8VPJ6 1459 aa17.85■□□□□ 0.45
Ube3b-201ENSMUST00000074002 Peg3Q3URU2 1571 aa17.84■□□□□ 0.45
Ube3b-201ENSMUST00000074002 Gtf2e1Q9D0D5 440 aa17.84■□□□□ 0.45
Ube3b-201ENSMUST00000074002 Smg6P61406 1418 aaKnown RBP17.84■□□□□ 0.45
Ube3b-201ENSMUST00000074002 Spryd3E9Q9B3 442 aa17.84■□□□□ 0.45
Ube3b-201ENSMUST00000074002 Shroom2A2ALU4 1481 aa17.83■□□□□ 0.45
Ube3b-201ENSMUST00000074002 Pde4cQ3UEI1 686 aa17.83■□□□□ 0.44
Ube3b-201ENSMUST00000074002 Map3k5O35099 1380 aa17.83■□□□□ 0.44
Ube3b-201ENSMUST00000074002 Exosc9Q9JHI7 438 aaKnown RBP17.82■□□□□ 0.44
Retrieved 100 of 22,080 RNA–protein pairs in 9.3 ms