RNA–Protein interactions for RNA: ENSMUST00000074002.11

Ube3b-201, Transcript of Ubiquitin-protein ligase E3B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ube3b, Length 5,194 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3b-201ENSMUST00000074002 Rhox8Q6VSS7 320 aa24.54■■□□□ 1.52
Ube3b-201ENSMUST00000074002 NischQ80TM9 1593 aa24.43■■□□□ 1.5
Ube3b-201ENSMUST00000074002 Abcc9P70170 1546 aa23.3■■□□□ 1.32
Ube3b-201ENSMUST00000074002 Gm35339A0A140LHH9 1649 aa22.92■■□□□ 1.26
Ube3b-201ENSMUST00000074002 Abcc8B2RUS7 1588 aa22.88■■□□□ 1.25
Ube3b-201ENSMUST00000074002 Rpgrip1Q9EPQ2 1331 aa22.75■■□□□ 1.23
Ube3b-201ENSMUST00000074002 Ccdc136Q3TVA9 1136 aa22.34■■□□□ 1.17
Ube3b-201ENSMUST00000074002 Ehmt2Q9Z148 1263 aaKnown RBP22.11■■□□□ 1.13
Ube3b-201ENSMUST00000074002 Rtl1Q7M732 1744 aa21.97■■□□□ 1.11
Ube3b-201ENSMUST00000074002 Trim41Q5NCC3 630 aa21.9■■□□□ 1.1
Ube3b-201ENSMUST00000074002 Ccdc180J3QNE4 1664 aa21.83■■□□□ 1.08
Ube3b-201ENSMUST00000074002 Las1lA2BE28 776 aaKnown RBP21.76■■□□□ 1.07
Ube3b-201ENSMUST00000074002 Cngb1E1AZ71 1325 aa21.72■■□□□ 1.07
Ube3b-201ENSMUST00000074002 Esf1Q3V1V3 845 aaKnown RBP21.71■■□□□ 1.07
Ube3b-201ENSMUST00000074002 Zcchc6Q5BLK4 1491 aaKnown RBP21.63■■□□□ 1.05
Ube3b-201ENSMUST00000074002 Acin1Q9JIX8 1338 aaKnown RBP21.46■■□□□ 1.03
Ube3b-201ENSMUST00000074002 Rb1cc1Q9ESK9 1588 aa21.43■■□□□ 1.02
Ube3b-201ENSMUST00000074002 HrcG5E8J6 738 aa21.35■■□□□ 1.01
Ube3b-201ENSMUST00000074002 Pcgf6Q99NA9 353 aa21.34■■□□□ 1.01
Ube3b-201ENSMUST00000074002 Gab3Q8BSM5 595 aa21.32■■□□□ 1
Ube3b-201ENSMUST00000074002 NacadQ5SWP3 1504 aa21.28■■□□□ 1
Ube3b-201ENSMUST00000074002 Dcaf1Q80TR8 1506 aa21.2■□□□□ 0.99
Ube3b-201ENSMUST00000074002 Zeb1Q64318 1117 aa21.13■□□□□ 0.97
Ube3b-201ENSMUST00000074002 Kdm5dQ62240 1548 aa21.11■□□□□ 0.97
Ube3b-201ENSMUST00000074002 Baz1aO88379 1555 aa21.06■□□□□ 0.96
Ube3b-201ENSMUST00000074002 ScribQ80U72 1612 aa20.95■□□□□ 0.94
Ube3b-201ENSMUST00000074002 Npm2Q80W85 207 aa20.95■□□□□ 0.94
Ube3b-201ENSMUST00000074002 Wdr66E9Q743 1299 aa20.84■□□□□ 0.93
Ube3b-201ENSMUST00000074002 CenpbP27790 599 aa20.84■□□□□ 0.93
Ube3b-201ENSMUST00000074002 Myt1lP97500 1187 aa20.82■□□□□ 0.92
Ube3b-201ENSMUST00000074002 Brd4Q9ESU6 1400 aaKnown RBP20.8■□□□□ 0.92
Ube3b-201ENSMUST00000074002 Supt5hO55201 1082 aaKnown RBP20.75■□□□□ 0.91
Ube3b-201ENSMUST00000074002 Myt1Q8CFC2 1127 aa20.66■□□□□ 0.9
Ube3b-201ENSMUST00000074002 Il27Q8K3I6 234 aa20.6■□□□□ 0.89
Ube3b-201ENSMUST00000074002 Sycp2Q9CUU3 1500 aa20.57■□□□□ 0.88
Ube3b-201ENSMUST00000074002 DiexfQ8BTT6 772 aaKnown RBP20.52■□□□□ 0.87
Ube3b-201ENSMUST00000074002 Neurod1Q60867 357 aa20.51■□□□□ 0.87
Ube3b-201ENSMUST00000074002 Crybg2B7ZCC2 1516 aa20.48■□□□□ 0.87
Ube3b-201ENSMUST00000074002 Cep164Q5DU05 1446 aa20.46■□□□□ 0.87
Ube3b-201ENSMUST00000074002 Chic1Q8CBW7 227 aa20.43■□□□□ 0.86
Ube3b-201ENSMUST00000074002 UbtfP25976 765 aaKnown RBP20.39■□□□□ 0.85
Ube3b-201ENSMUST00000074002 Pelp1Q9DBD5 1123 aaKnown RBP20.32■□□□□ 0.84
Ube3b-201ENSMUST00000074002 Smarca2Q6DIC0 1577 aa20.27■□□□□ 0.83
Ube3b-201ENSMUST00000074002 Golga3P55937 1487 aa20.26■□□□□ 0.83
Ube3b-201ENSMUST00000074002 NefmP08553 848 aa20.23■□□□□ 0.83
Ube3b-201ENSMUST00000074002 Cdk11bP24788 784 aaKnown RBP20.22■□□□□ 0.83
Ube3b-201ENSMUST00000074002 Amer1Q7TS75 1132 aa20.17■□□□□ 0.82
Ube3b-201ENSMUST00000074002 Csrnp3P59055 597 aa20.13■□□□□ 0.81
Ube3b-201ENSMUST00000074002 Ube2uB1AUC4 352 aa20.12■□□□□ 0.81
Ube3b-201ENSMUST00000074002 Npm1Q61937 292 aaKnown RBP20.11■□□□□ 0.81
Ube3b-201ENSMUST00000074002 Cecr2E9Q2Z1 1453 aa20.1■□□□□ 0.81
Ube3b-201ENSMUST00000074002 Ap3b1Q9Z1T1 1105 aa20.06■□□□□ 0.8
Ube3b-201ENSMUST00000074002 Nop58Q6DFW4 536 aaKnown RBP20.04■□□□□ 0.8
Ube3b-201ENSMUST00000074002 Rsf1E9PWW9 1441 aaKnown RBP20.04■□□□□ 0.8
Ube3b-201ENSMUST00000074002 Gm38655A0A286YDK6 273 aa20.01■□□□□ 0.79
Ube3b-201ENSMUST00000074002 Ppargc1bQ8VHJ7 1014 aa20■□□□□ 0.79
Ube3b-201ENSMUST00000074002 Ttbk1Q6PCN3 1308 aa19.98■□□□□ 0.79
Ube3b-201ENSMUST00000074002 1700123L14RikQ3V2K7 440 aa19.97■□□□□ 0.79
Ube3b-201ENSMUST00000074002 CftrP26361 1476 aa19.96■□□□□ 0.79
Ube3b-201ENSMUST00000074002 Pds5bQ4VA53 1446 aaKnown RBP19.95■□□□□ 0.78
Ube3b-201ENSMUST00000074002 Ubl4bQ9CQ84 188 aa19.93■□□□□ 0.78
Ube3b-201ENSMUST00000074002 Ercc6F8VPZ5 1481 aa19.9■□□□□ 0.78
Ube3b-201ENSMUST00000074002 Mier1Q5UAK0 511 aa19.9■□□□□ 0.78
Ube3b-201ENSMUST00000074002 Synj1Q8CHC4 1574 aa19.89■□□□□ 0.77
Ube3b-201ENSMUST00000074002 Anks4bQ8K3X6 423 aa19.88■□□□□ 0.77
Ube3b-201ENSMUST00000074002 Ccdc88bQ4QRL3 1481 aa19.87■□□□□ 0.77
Ube3b-201ENSMUST00000074002 Plekhg3Q4VAC9 1341 aa19.83■□□□□ 0.76
Ube3b-201ENSMUST00000074002 Kif15Q6P9L6 1387 aa19.83■□□□□ 0.76
Ube3b-201ENSMUST00000074002 Smarca4Q3TKT4 1613 aaKnown RBP19.8■□□□□ 0.76
Ube3b-201ENSMUST00000074002 Clip1Q922J3 1391 aa19.78■□□□□ 0.76
Ube3b-201ENSMUST00000074002 Sall2Q9QX96 1004 aa19.77■□□□□ 0.76
Ube3b-201ENSMUST00000074002 Aplp2Q06335 707 aa19.75■□□□□ 0.75
Ube3b-201ENSMUST00000074002 Atad2bE9Q166 1460 aaKnown RBP19.75■□□□□ 0.75
Ube3b-201ENSMUST00000074002 Fam50aQ9WV03 339 aaKnown RBP19.74■□□□□ 0.75
Ube3b-201ENSMUST00000074002 Fmn1Q05860 1466 aa19.71■□□□□ 0.75
Ube3b-201ENSMUST00000074002 Cttnbp2B9EJA2 1648 aa19.69■□□□□ 0.74
Ube3b-201ENSMUST00000074002 BicraF8VPZ9 1578 aa19.66■□□□□ 0.74
Ube3b-201ENSMUST00000074002 Lmod2Q3UHZ5 550 aa19.65■□□□□ 0.74
Ube3b-201ENSMUST00000074002 Bcl11aQ9QYE3 773 aa19.61■□□□□ 0.73
Ube3b-201ENSMUST00000074002 Ccdc18Q640L5 1455 aa19.61■□□□□ 0.73
Ube3b-201ENSMUST00000074002 Tnnt3Q9QZ47 272 aa19.6■□□□□ 0.73
Ube3b-201ENSMUST00000074002 Iqgap2Q3UQ44 1575 aa19.56■□□□□ 0.72
Ube3b-201ENSMUST00000074002 TonslQ6NZL6 1363 aa19.53■□□□□ 0.72
Ube3b-201ENSMUST00000074002 Slc24a1Q91WD8 1130 aa19.53■□□□□ 0.72
Ube3b-201ENSMUST00000074002 Setd5Q5XJV7 1441 aa19.47■□□□□ 0.71
Ube3b-201ENSMUST00000074002 Stra8P70278 393 aa19.47■□□□□ 0.71
Ube3b-201ENSMUST00000074002 Cep162Q6ZQ06 1403 aa19.45■□□□□ 0.7
Ube3b-201ENSMUST00000074002 Rtl5Q5DTT4 599 aa19.39■□□□□ 0.69
Ube3b-201ENSMUST00000074002 ClspnQ80YR7 1315 aa19.38■□□□□ 0.69
Ube3b-201ENSMUST00000074002 Eea1Q8BL66 1411 aa19.38■□□□□ 0.69
Ube3b-201ENSMUST00000074002 Phldb1Q6PDH0 1371 aaKnown RBP19.37■□□□□ 0.69
Ube3b-201ENSMUST00000074002 4933416C03RikQ3V063 378 aa19.37■□□□□ 0.69
Ube3b-201ENSMUST00000074002 Mapk8ip2Q9ERE9 830 aa19.36■□□□□ 0.69
Ube3b-201ENSMUST00000074002 BlmO88700 1416 aa19.35■□□□□ 0.69
Ube3b-201ENSMUST00000074002 NclP09405 707 aaKnown RBP19.35■□□□□ 0.69
Ube3b-201ENSMUST00000074002 Fam71e1A1L3C1 212 aa19.33■□□□□ 0.68
Ube3b-201ENSMUST00000074002 Anp32aO35381 247 aa19.33■□□□□ 0.68
Ube3b-201ENSMUST00000074002 Cux2P70298 1426 aa19.3■□□□□ 0.68
Ube3b-201ENSMUST00000074002 Rapgef2Q8CHG7 1496 aa19.27■□□□□ 0.68
Ube3b-201ENSMUST00000074002 Cc2d2aQ8CFW7 1633 aa19.26■□□□□ 0.67
Retrieved 100 of 22,080 RNA–protein pairs in 13.7 ms