RNA–Protein interactions for RNA: ENSMUST00000071370.6

Pcdh17-201, Transcript of Protocadherin 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh17, Length 11,451 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17-201ENSMUST00000071370 CntlnA2AM05 1397 aa9.6□□□□□ -0.87
Pcdh17-201ENSMUST00000071370 Rrp9Q91WM3 475 aaKnown RBP9.6□□□□□ -0.87
Pcdh17-201ENSMUST00000071370 Stk24Q99KH8 431 aa9.6□□□□□ -0.87
Pcdh17-201ENSMUST00000071370 Gm973E9Q295 1059 aa9.6□□□□□ -0.87
Pcdh17-201ENSMUST00000071370 Cep162Q6ZQ06 1403 aa9.59□□□□□ -0.87
Pcdh17-201ENSMUST00000071370 NudcO35685 332 aaKnown RBP9.59□□□□□ -0.87
Pcdh17-201ENSMUST00000071370 Dnai2A2AC93 623 aa9.59□□□□□ -0.87
Pcdh17-201ENSMUST00000071370 Hsp90b1P08113 802 aaKnown RBP9.59□□□□□ -0.87
Pcdh17-201ENSMUST00000071370 Apbb1Q9QXJ1 710 aa9.59□□□□□ -0.87
Pcdh17-201ENSMUST00000071370 Anapc15P60007 132 aa9.58□□□□□ -0.88
Pcdh17-201ENSMUST00000071370 Noc3lQ8VI84 807 aaKnown RBP9.58□□□□□ -0.88
Pcdh17-201ENSMUST00000071370 Slc4a1apE9PX68 744 aa9.58□□□□□ -0.88
Pcdh17-201ENSMUST00000071370 Neurod2Q62414 383 aa9.58□□□□□ -0.88
Pcdh17-201ENSMUST00000071370 Ppp1r18Q8BQ30 594 aa9.58□□□□□ -0.88
Pcdh17-201ENSMUST00000071370 Smg6P61406 1418 aaKnown RBP9.57□□□□□ -0.88
Pcdh17-201ENSMUST00000071370 Nol10Q5RJG1 687 aaKnown RBP9.57□□□□□ -0.88
Pcdh17-201ENSMUST00000071370 Kdm5dQ62240 1548 aa9.57□□□□□ -0.88
Pcdh17-201ENSMUST00000071370 Rwdd1Q9CQK7 243 aa9.57□□□□□ -0.88
Pcdh17-201ENSMUST00000071370 MccE9PWI3 1003 aa9.57□□□□□ -0.88
Pcdh17-201ENSMUST00000071370 Dnttip2Q8R2M2 758 aaKnown RBP9.57□□□□□ -0.88
Pcdh17-201ENSMUST00000071370 Rrp7aQ9D1C9 280 aaKnown RBP9.57□□□□□ -0.88
Pcdh17-201ENSMUST00000071370 Cttnbp2B9EJA2 1648 aa9.57□□□□□ -0.88
Pcdh17-201ENSMUST00000071370 VgfQ0VGU4 617 aa9.56□□□□□ -0.88
Pcdh17-201ENSMUST00000071370 Ercc6F8VPZ5 1481 aa9.56□□□□□ -0.88
Pcdh17-201ENSMUST00000071370 Card11Q8CIS0 1159 aa9.56□□□□□ -0.88
Pcdh17-201ENSMUST00000071370 Ush1cQ9ES64 910 aa9.56□□□□□ -0.88
Pcdh17-201ENSMUST00000071370 Becn1O88597 448 aa9.55□□□□□ -0.88
Pcdh17-201ENSMUST00000071370 Wwc2Q6NXJ0 1187 aa9.55□□□□□ -0.88
Pcdh17-201ENSMUST00000071370 Chmp5Q9D7S9 219 aa9.55□□□□□ -0.88
Pcdh17-201ENSMUST00000071370 Rtf1A2AQ19 715 aaKnown RBP9.54□□□□□ -0.88
Pcdh17-201ENSMUST00000071370 Znf316Q6PGE4 1016 aa9.54□□□□□ -0.88
Pcdh17-201ENSMUST00000071370 UacaQ8CGB3 1411 aa9.53□□□□□ -0.88
Pcdh17-201ENSMUST00000071370 Pde3bQ61409 1100 aa9.52□□□□□ -0.89
Pcdh17-201ENSMUST00000071370 Mtus2Q3UHD3 1353 aa9.52□□□□□ -0.89
Pcdh17-201ENSMUST00000071370 Tpm3-rs7D3Z2H9 248 aa9.52□□□□□ -0.89
Pcdh17-201ENSMUST00000071370 Cux1P53564 1515 aa9.52□□□□□ -0.89
Pcdh17-201ENSMUST00000071370 Ipo8Q7TMY7 1010 aa9.52□□□□□ -0.89
Pcdh17-201ENSMUST00000071370 Armcx1Q9CX83 456 aa9.51□□□□□ -0.89
Pcdh17-201ENSMUST00000071370 RdxP26043 583 aaKnown RBP9.51□□□□□ -0.89
Pcdh17-201ENSMUST00000071370 Kif15Q6P9L6 1387 aa9.5□□□□□ -0.89
Pcdh17-201ENSMUST00000071370 Gtf2a1Q99PM3 378 aa9.5□□□□□ -0.89
Pcdh17-201ENSMUST00000071370 MlecQ6ZQI3 291 aaKnown RBP9.5□□□□□ -0.89
Pcdh17-201ENSMUST00000071370 Ppm1fQ8CGA0 452 aa9.5□□□□□ -0.89
Pcdh17-201ENSMUST00000071370 Tpm2P58774 284 aa9.5□□□□□ -0.89
Pcdh17-201ENSMUST00000071370 Mak16Q8BGS0 296 aaKnown RBP9.5□□□□□ -0.89
Pcdh17-201ENSMUST00000071370 Rapgef2Q8CHG7 1496 aa9.5□□□□□ -0.89
Pcdh17-201ENSMUST00000071370 Polr1aO35134 1717 aaKnown RBP9.5□□□□□ -0.89
Pcdh17-201ENSMUST00000071370 Cnga1P29974 684 aa9.5□□□□□ -0.89
Pcdh17-201ENSMUST00000071370 HdgfP51859 237 aaKnown RBP9.5□□□□□ -0.89
Pcdh17-201ENSMUST00000071370 BccipQ9CWI3 316 aa9.49□□□□□ -0.89
Pcdh17-201ENSMUST00000071370 HnrnpuQ8VEK3 800 aaKnown RBP9.49□□□□□ -0.89
Pcdh17-201ENSMUST00000071370 Zscan21Q07231 555 aa9.49□□□□□ -0.89
Pcdh17-201ENSMUST00000071370 SafbD3YXK2 937 aaKnown RBP9.48□□□□□ -0.89
Pcdh17-201ENSMUST00000071370 Prm3Q62100 101 aa9.48□□□□□ -0.89
Pcdh17-201ENSMUST00000071370 Cspp1B2RX88 1205 aa9.48□□□□□ -0.89
Pcdh17-201ENSMUST00000071370 Kif20aP97329 887 aa9.48□□□□□ -0.89
Pcdh17-201ENSMUST00000071370 Phf14Q9D4H9 881 aa9.48□□□□□ -0.89
Pcdh17-201ENSMUST00000071370 Sart3Q9JLI8 962 aaKnown RBP9.47□□□□□ -0.89
Pcdh17-201ENSMUST00000071370 Rsph3aQ3UFY4 516 aa9.47□□□□□ -0.89
Pcdh17-201ENSMUST00000071370 Ipo4Q8VI75 1082 aa9.47□□□□□ -0.89
Pcdh17-201ENSMUST00000071370 Atp6v1dP57746 247 aa9.47□□□□□ -0.89
Pcdh17-201ENSMUST00000071370 Dbr1Q923B1 550 aa9.46□□□□□ -0.89
Pcdh17-201ENSMUST00000071370 Vps53Q8CCB4 832 aa9.46□□□□□ -0.89
Pcdh17-201ENSMUST00000071370 Cald1E9QA15 768 aaKnown RBP9.46□□□□□ -0.89
Pcdh17-201ENSMUST00000071370 Pcmtd1P59913 357 aa9.46□□□□□ -0.9
Pcdh17-201ENSMUST00000071370 U2surpQ6NV83 1029 aaKnown RBP9.46□□□□□ -0.9
Pcdh17-201ENSMUST00000071370 Plin1Q8CGN5 517 aa9.46□□□□□ -0.9
Pcdh17-201ENSMUST00000071370 Cux2P70298 1426 aa9.45□□□□□ -0.9
Pcdh17-201ENSMUST00000071370 Psme1P97371 249 aa9.45□□□□□ -0.9
Pcdh17-201ENSMUST00000071370 Smarce1O54941 411 aaKnown RBP9.45□□□□□ -0.9
Pcdh17-201ENSMUST00000071370 Erich6bQ9D4S6 220 aa9.44□□□□□ -0.9
Pcdh17-201ENSMUST00000071370 SetQ9EQU5 289 aaKnown RBP9.44□□□□□ -0.9
Pcdh17-201ENSMUST00000071370 Stk26Q99JT2 416 aa9.44□□□□□ -0.9
Pcdh17-201ENSMUST00000071370 Ubap1lG3UW59 384 aa9.44□□□□□ -0.9
Pcdh17-201ENSMUST00000071370 Hoxa7P02830 229 aa9.43□□□□□ -0.9
Pcdh17-201ENSMUST00000071370 Tomm22Q9CPQ3 142 aa9.43□□□□□ -0.9
Pcdh17-201ENSMUST00000071370 Tnnt1O88346 262 aa9.43□□□□□ -0.9
Pcdh17-201ENSMUST00000071370 Iffo2Q8R2V2 512 aa9.43□□□□□ -0.9
Pcdh17-201ENSMUST00000071370 Ccdc88bQ4QRL3 1481 aa9.42□□□□□ -0.9
Pcdh17-201ENSMUST00000071370 Ylpm1Q9R0I7 1386 aaKnown RBP9.42□□□□□ -0.9
Pcdh17-201ENSMUST00000071370 Q3TQI7 289 aaKnown RBP9.42□□□□□ -0.9
Pcdh17-201ENSMUST00000071370 Kif3aP28741 701 aa9.41□□□□□ -0.9
Pcdh17-201ENSMUST00000071370 Sox12Q04890 314 aa9.41□□□□□ -0.9
Pcdh17-201ENSMUST00000071370 Stard8Q8K031 1019 aa9.41□□□□□ -0.9
Pcdh17-201ENSMUST00000071370 Spryd3E9Q9B3 442 aa9.41□□□□□ -0.9
Pcdh17-201ENSMUST00000071370 MecomP14404 1042 aa9.41□□□□□ -0.9
Pcdh17-201ENSMUST00000071370 Washc2Q6PGL7 1334 aa9.41□□□□□ -0.9
Pcdh17-201ENSMUST00000071370 Tmf1B9EKI3 1091 aa9.4□□□□□ -0.9
Pcdh17-201ENSMUST00000071370 Prkrip1Q9CWV6 186 aaKnown RBP9.4□□□□□ -0.9
Pcdh17-201ENSMUST00000071370 R3hcc1Q8BSI6 488 aa9.4□□□□□ -0.91
Pcdh17-201ENSMUST00000071370 Ciz1Q8VEH2 845 aa9.4□□□□□ -0.91
Pcdh17-201ENSMUST00000071370 Kif16bB1AVY7 1312 aa9.39□□□□□ -0.91
Pcdh17-201ENSMUST00000071370 Ccdc173A0JLY1 547 aa9.39□□□□□ -0.91
Pcdh17-201ENSMUST00000071370 Cgnl1Q6AW69 1298 aa9.39□□□□□ -0.91
Pcdh17-201ENSMUST00000071370 Chmp3Q9CQ10 224 aa9.39□□□□□ -0.91
Pcdh17-201ENSMUST00000071370 Spag9Q58A65 1321 aaKnown RBP9.39□□□□□ -0.91
Pcdh17-201ENSMUST00000071370 CalrP14211 416 aaKnown RBP9.39□□□□□ -0.91
Pcdh17-201ENSMUST00000071370 Tpm3P21107 285 aaKnown RBP9.39□□□□□ -0.91
Pcdh17-201ENSMUST00000071370 Dhx8A2A4P0 1244 aaKnown RBP9.39□□□□□ -0.91
Pcdh17-201ENSMUST00000071370 Txndc2Q6P902 515 aa9.38□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 75 ms