RNA–Protein interactions for RNA: ENSMUST00000066432.11

Scn3a-201, Transcript of Sodium channel protein, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Scn3a, Length 9,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3a-201ENSMUST00000066432 Ppm1gQ61074 542 aa9.38□□□□□ -0.91
Scn3a-201ENSMUST00000066432 Mroh2bQ7M6Y6 1581 aa9.37□□□□□ -0.91
Scn3a-201ENSMUST00000066432 Ythdc1E9Q5K9 736 aaKnown RBP9.37□□□□□ -0.91
Scn3a-201ENSMUST00000066432 Hoxa7P02830 229 aa9.37□□□□□ -0.91
Scn3a-201ENSMUST00000066432 Polr3glQ8R0C0 218 aa9.37□□□□□ -0.91
Scn3a-201ENSMUST00000066432 Ciz1Q8VEH2 845 aa9.37□□□□□ -0.91
Scn3a-201ENSMUST00000066432 Prdm16A2A935 1275 aa9.37□□□□□ -0.91
Scn3a-201ENSMUST00000066432 Sall2Q9QX96 1004 aa9.36□□□□□ -0.91
Scn3a-201ENSMUST00000066432 Frmpd1A2AKB4 1549 aa9.36□□□□□ -0.91
Scn3a-201ENSMUST00000066432 Arhgef5E9Q7D5 1581 aa9.36□□□□□ -0.91
Scn3a-201ENSMUST00000066432 KnstrnQ9D9Z1 312 aaKnown RBP9.36□□□□□ -0.91
Scn3a-201ENSMUST00000066432 PogzQ8BZH4 1409 aaKnown RBP9.35□□□□□ -0.91
Scn3a-201ENSMUST00000066432 Stag3O70576 1240 aa9.35□□□□□ -0.91
Scn3a-201ENSMUST00000066432 DaxxO35613 739 aa9.35□□□□□ -0.91
Scn3a-201ENSMUST00000066432 Adam1bQ8R534 806 aa9.35□□□□□ -0.91
Scn3a-201ENSMUST00000066432 Pkd2O35245 966 aa9.35□□□□□ -0.91
Scn3a-201ENSMUST00000066432 Znf326O88291 580 aa9.35□□□□□ -0.91
Scn3a-201ENSMUST00000066432 DroshaQ5HZJ0 1373 aaKnown RBP9.35□□□□□ -0.91
Scn3a-201ENSMUST00000066432 Ofd1Q80Z25 1017 aa9.35□□□□□ -0.91
Scn3a-201ENSMUST00000066432 Soga1E1U8D0 1418 aa9.34□□□□□ -0.91
Scn3a-201ENSMUST00000066432 P3h3Q8CG70 732 aa9.32□□□□□ -0.92
Scn3a-201ENSMUST00000066432 CenpjQ569L8 1344 aa9.31□□□□□ -0.92
Scn3a-201ENSMUST00000066432 Erich3F6QRE9 1637 aa9.31□□□□□ -0.92
Scn3a-201ENSMUST00000066432 Arhgap31A6X8Z5 1425 aa9.31□□□□□ -0.92
Scn3a-201ENSMUST00000066432 Gtf2e1Q9D0D5 440 aa9.31□□□□□ -0.92
Scn3a-201ENSMUST00000066432 MccE9PWI3 1003 aa9.3□□□□□ -0.92
Scn3a-201ENSMUST00000066432 Mphosph9A6H5Y1 991 aa9.3□□□□□ -0.92
Scn3a-201ENSMUST00000066432 TnnQ80Z71 1560 aa9.3□□□□□ -0.92
Scn3a-201ENSMUST00000066432 Rfx7F8VPJ6 1459 aa9.29□□□□□ -0.92
Scn3a-201ENSMUST00000066432 Peg3Q3URU2 1571 aa9.29□□□□□ -0.92
Scn3a-201ENSMUST00000066432 Arhgap5P97393 1501 aa9.29□□□□□ -0.92
Scn3a-201ENSMUST00000066432 Sart3Q9JLI8 962 aaKnown RBP9.29□□□□□ -0.92
Scn3a-201ENSMUST00000066432 Rwdd1Q9CQK7 243 aa9.28□□□□□ -0.92
Scn3a-201ENSMUST00000066432 Fgd6Q69ZL1 1399 aa9.28□□□□□ -0.92
Scn3a-201ENSMUST00000066432 Urb2E9Q7L1 1524 aaKnown RBP9.28□□□□□ -0.92
Scn3a-201ENSMUST00000066432 Spag9Q58A65 1321 aaKnown RBP9.28□□□□□ -0.92
Scn3a-201ENSMUST00000066432 CadpsQ80TJ1 1355 aa9.28□□□□□ -0.92
Scn3a-201ENSMUST00000066432 Dnai2A2AC93 623 aa9.28□□□□□ -0.92
Scn3a-201ENSMUST00000066432 Hmgb2P30681 210 aaKnown RBP9.28□□□□□ -0.92
Scn3a-201ENSMUST00000066432 Gm7298A0A0N4SVU1 1476 aa9.28□□□□□ -0.92
Scn3a-201ENSMUST00000066432 Zscan21Q07231 555 aa9.27□□□□□ -0.92
Scn3a-201ENSMUST00000066432 Kdm2aP59997 1161 aa9.27□□□□□ -0.93
Scn3a-201ENSMUST00000066432 Fam135aQ6NS59 1506 aa9.27□□□□□ -0.93
Scn3a-201ENSMUST00000066432 EprsQ8CGC7 1512 aaKnown RBP9.26□□□□□ -0.93
Scn3a-201ENSMUST00000066432 Ppp1r18Q8BQ30 594 aa9.25□□□□□ -0.93
Scn3a-201ENSMUST00000066432 Hsp90ab1P11499 724 aaKnown RBP9.25□□□□□ -0.93
Scn3a-201ENSMUST00000066432 4933402E13RikQ9D4D2 429 aa9.25□□□□□ -0.93
Scn3a-201ENSMUST00000066432 Usp47Q8BY87 1376 aa9.25□□□□□ -0.93
Scn3a-201ENSMUST00000066432 Ppp4r2Q0VGB7 417 aa9.25□□□□□ -0.93
Scn3a-201ENSMUST00000066432 Fam163aQ8CAA5 168 aa9.25□□□□□ -0.93
Scn3a-201ENSMUST00000066432 Pabpn1Q8CCS6 302 aaKnown RBP9.25□□□□□ -0.93
Scn3a-201ENSMUST00000066432 Caskin1Q6P9K8 1431 aa9.24□□□□□ -0.93
Scn3a-201ENSMUST00000066432 Gm6268A2A3U9 297 aa9.24□□□□□ -0.93
Scn3a-201ENSMUST00000066432 Mak16Q8BGS0 296 aaKnown RBP9.24□□□□□ -0.93
Scn3a-201ENSMUST00000066432 Srcin1Q9QWI6 1250 aa9.23□□□□□ -0.93
Scn3a-201ENSMUST00000066432 Naip1Q9QWK5 1403 aa9.23□□□□□ -0.93
Scn3a-201ENSMUST00000066432 FanciQ8K368 1330 aa9.23□□□□□ -0.93
Scn3a-201ENSMUST00000066432 Gcc2Q8CHG3 1679 aa9.23□□□□□ -0.93
Scn3a-201ENSMUST00000066432 Rtf1A2AQ19 715 aaKnown RBP9.23□□□□□ -0.93
Scn3a-201ENSMUST00000066432 Gm973E9Q295 1059 aa9.23□□□□□ -0.93
Scn3a-201ENSMUST00000066432 Zbtb4Q5F293 982 aa9.23□□□□□ -0.93
Scn3a-201ENSMUST00000066432 Il16O54824 1322 aa9.23□□□□□ -0.93
Scn3a-201ENSMUST00000066432 ErbinQ80TH2 1402 aa9.23□□□□□ -0.93
Scn3a-201ENSMUST00000066432 Cgnl1Q6AW69 1298 aa9.23□□□□□ -0.93
Scn3a-201ENSMUST00000066432 Gprasp1Q5U4C1 1347 aa9.23□□□□□ -0.93
Scn3a-201ENSMUST00000066432 Rundc1Q0VDN7 615 aa9.22□□□□□ -0.93
Scn3a-201ENSMUST00000066432 Rrbp1Q99PL5 1605 aaKnown RBP9.22□□□□□ -0.93
Scn3a-201ENSMUST00000066432 Trak1Q6PD31 939 aa9.22□□□□□ -0.93
Scn3a-201ENSMUST00000066432 Igf1rQ60751 1373 aa9.22□□□□□ -0.93
Scn3a-201ENSMUST00000066432 Jph4Q80WT0 628 aa9.22□□□□□ -0.93
Scn3a-201ENSMUST00000066432 Gm14025A2AP89 1413 aa9.22□□□□□ -0.93
Scn3a-201ENSMUST00000066432 Grwd1Q810D6 446 aaKnown RBP9.22□□□□□ -0.93
Scn3a-201ENSMUST00000066432 CatipB9EKE5 520 aa9.22□□□□□ -0.93
Scn3a-201ENSMUST00000066432 Tcerg1Q8CGF7 1100 aaKnown RBP9.21□□□□□ -0.93
Scn3a-201ENSMUST00000066432 Rapgef6Q5NCJ1 1609 aa9.21□□□□□ -0.93
Scn3a-201ENSMUST00000066432 Cabp1Q9JLK7 227 aa9.21□□□□□ -0.93
Scn3a-201ENSMUST00000066432 Trim44Q9QXA7 346 aa9.21□□□□□ -0.93
Scn3a-201ENSMUST00000066432 Cfap74Q3UY96 1578 aa9.21□□□□□ -0.94
Scn3a-201ENSMUST00000066432 Pcf11G3X9Z4 1553 aa9.21□□□□□ -0.94
Scn3a-201ENSMUST00000066432 Trim30dE9PWL0 497 aa9.21□□□□□ -0.94
Scn3a-201ENSMUST00000066432 Smarce1O54941 411 aaKnown RBP9.2□□□□□ -0.94
Scn3a-201ENSMUST00000066432 Rad21Q61550 635 aaKnown RBP9.2□□□□□ -0.94
Scn3a-201ENSMUST00000066432 Supt6hQ62383 1726 aaKnown RBP9.2□□□□□ -0.94
Scn3a-201ENSMUST00000066432 Ccdc27Q3V036 639 aa9.19□□□□□ -0.94
Scn3a-201ENSMUST00000066432 Camsap2Q8C1B1 1461 aa9.19□□□□□ -0.94
Scn3a-201ENSMUST00000066432 Atp6v1dP57746 247 aa9.19□□□□□ -0.94
Scn3a-201ENSMUST00000066432 Stk24Q99KH8 431 aa9.19□□□□□ -0.94
Scn3a-201ENSMUST00000066432 Rock1P70335 1354 aa9.19□□□□□ -0.94
Scn3a-201ENSMUST00000066432 Smg6P61406 1418 aaKnown RBP9.18□□□□□ -0.94
Scn3a-201ENSMUST00000066432 Sart1Q9Z315 806 aaKnown RBP9.18□□□□□ -0.94
Scn3a-201ENSMUST00000066432 Mlh3A0A1Y7VMP7 1443 aa9.18□□□□□ -0.94
Scn3a-201ENSMUST00000066432 Ifit1bl1D3Z6F0 470 aa9.18□□□□□ -0.94
Scn3a-201ENSMUST00000066432 CanxP35564 591 aaKnown RBP9.17□□□□□ -0.94
Scn3a-201ENSMUST00000066432 Wwc2Q6NXJ0 1187 aa9.17□□□□□ -0.94
Scn3a-201ENSMUST00000066432 Ppargc1bQ8VHJ7 1014 aa9.17□□□□□ -0.94
Scn3a-201ENSMUST00000066432 Ccar1Q8CH18 1146 aaKnown RBP9.17□□□□□ -0.94
Scn3a-201ENSMUST00000066432 PnnO35691 725 aaKnown RBP9.17□□□□□ -0.94
Scn3a-201ENSMUST00000066432 Glipr1l2Q9CQ35 332 aa9.17□□□□□ -0.94
Scn3a-201ENSMUST00000066432 Eif4g1Q6NZJ6 1600 aaKnown RBP9.16□□□□□ -0.94
Scn3a-201ENSMUST00000066432 Asxl1P59598 1514 aa9.16□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 27 ms