RNA–Protein interactions for RNA: ENSMUST00000064190.12

Rai1-201, Transcript of Retinoic acid-induced protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rai1, Length 7,348 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1-201ENSMUST00000064190 AU015836B2RUM3 263 aa20.27■□□□□ 0.83
Rai1-201ENSMUST00000064190 KnstrnQ9D9Z1 312 aaKnown RBP20.26■□□□□ 0.83
Rai1-201ENSMUST00000064190 Aebp2Q9Z248 504 aaKnown RBP20.26■□□□□ 0.83
Rai1-201ENSMUST00000064190 Chmp4bQ9D8B3 224 aaKnown RBP20.24■□□□□ 0.83
Rai1-201ENSMUST00000064190 Cep164Q5DU05 1446 aa20.24■□□□□ 0.83
Rai1-201ENSMUST00000064190 NudcO35685 332 aaKnown RBP20.23■□□□□ 0.83
Rai1-201ENSMUST00000064190 Dcaf1Q80TR8 1506 aa20.22■□□□□ 0.83
Rai1-201ENSMUST00000064190 MecomP14404 1042 aa20.22■□□□□ 0.83
Rai1-201ENSMUST00000064190 Nol10Q5RJG1 687 aaKnown RBP20.22■□□□□ 0.83
Rai1-201ENSMUST00000064190 Eif4g2Q62448 906 aaKnown RBP20.22■□□□□ 0.83
Rai1-201ENSMUST00000064190 Rtf1A2AQ19 715 aaKnown RBP20.21■□□□□ 0.83
Rai1-201ENSMUST00000064190 Cald1E9QA15 768 aaKnown RBP20.21■□□□□ 0.83
Rai1-201ENSMUST00000064190 Fam193aQ8CGI1 1231 aaKnown RBP20.21■□□□□ 0.83
Rai1-201ENSMUST00000064190 SafbD3YXK2 937 aaKnown RBP20.2■□□□□ 0.82
Rai1-201ENSMUST00000064190 Ppm1fQ8CGA0 452 aa20.18■□□□□ 0.82
Rai1-201ENSMUST00000064190 Setd5Q5XJV7 1441 aa20.17■□□□□ 0.82
Rai1-201ENSMUST00000064190 RdxP26043 583 aaKnown RBP20.17■□□□□ 0.82
Rai1-201ENSMUST00000064190 Znf330Q922H9 316 aa20.17■□□□□ 0.82
Rai1-201ENSMUST00000064190 Dnai2A2AC93 623 aa20.16■□□□□ 0.82
Rai1-201ENSMUST00000064190 Tmco5bQ80X59 307 aa20.15■□□□□ 0.82
Rai1-201ENSMUST00000064190 Arhgap27A2AB59 869 aa20.14■□□□□ 0.82
Rai1-201ENSMUST00000064190 Paf1Q8K2T8 535 aa20.14■□□□□ 0.81
Rai1-201ENSMUST00000064190 Rrp7aQ9D1C9 280 aaKnown RBP20.13■□□□□ 0.81
Rai1-201ENSMUST00000064190 Tomm22Q9CPQ3 142 aa20.12■□□□□ 0.81
Rai1-201ENSMUST00000064190 Tpm3P21107 285 aaKnown RBP20.12■□□□□ 0.81
Rai1-201ENSMUST00000064190 GorabQ8BRM2 368 aa20.11■□□□□ 0.81
Rai1-201ENSMUST00000064190 Cluap1Q8R3P7 413 aa20.11■□□□□ 0.81
Rai1-201ENSMUST00000064190 Drc7Q6V3W6 876 aa20.11■□□□□ 0.81
Rai1-201ENSMUST00000064190 Brpf1B2RRD7 1212 aa20.1■□□□□ 0.81
Rai1-201ENSMUST00000064190 Rwdd1Q9CQK7 243 aa20.09■□□□□ 0.81
Rai1-201ENSMUST00000064190 Chmp3Q9CQ10 224 aa20.09■□□□□ 0.81
Rai1-201ENSMUST00000064190 Mfap1aC0HKD8 439 aaKnown RBP20.09■□□□□ 0.81
Rai1-201ENSMUST00000064190 Mfap1bC0HKD9 439 aaKnown RBP20.09■□□□□ 0.81
Rai1-201ENSMUST00000064190 Tpd52l1O54818 204 aa20.09■□□□□ 0.81
Rai1-201ENSMUST00000064190 Kri1Q8VDQ9 704 aaKnown RBP20.08■□□□□ 0.8
Rai1-201ENSMUST00000064190 Stk26Q99JT2 416 aa20.08■□□□□ 0.8
Rai1-201ENSMUST00000064190 HnrnpuQ8VEK3 800 aaKnown RBP20.07■□□□□ 0.8
Rai1-201ENSMUST00000064190 Trim30aP15533 496 aa20.07■□□□□ 0.8
Rai1-201ENSMUST00000064190 Q3TQI7 289 aaKnown RBP20.06■□□□□ 0.8
Rai1-201ENSMUST00000064190 SlkO54988 1233 aa20.06■□□□□ 0.8
Rai1-201ENSMUST00000064190 Sox12Q04890 314 aa20.06■□□□□ 0.8
Rai1-201ENSMUST00000064190 Sart3Q9JLI8 962 aaKnown RBP20.06■□□□□ 0.8
Rai1-201ENSMUST00000064190 Hdgfl1Q2VPR5 283 aa20.06■□□□□ 0.8
Rai1-201ENSMUST00000064190 R3hcc1Q8BSI6 488 aa20.05■□□□□ 0.8
Rai1-201ENSMUST00000064190 Becn1O88597 448 aa20.04■□□□□ 0.8
Rai1-201ENSMUST00000064190 Ripply1Q2WG77 201 aa20.03■□□□□ 0.8
Rai1-201ENSMUST00000064190 Speer4f1Q9D5Q6 258 aa20.03■□□□□ 0.8
Rai1-201ENSMUST00000064190 Ccer1Q9CQL2 403 aa20.02■□□□□ 0.8
Rai1-201ENSMUST00000064190 Supt16hQ920B9 1047 aa20.01■□□□□ 0.79
Rai1-201ENSMUST00000064190 Pibf1E9Q6K3 756 aa20.01■□□□□ 0.79
Rai1-201ENSMUST00000064190 AcrbpQ3V140 540 aa20.01■□□□□ 0.79
Rai1-201ENSMUST00000064190 Dnai1Q8C0M8 701 aa20■□□□□ 0.79
Rai1-201ENSMUST00000064190 Rrp12Q6P5B0 1295 aaKnown RBP20■□□□□ 0.79
Rai1-201ENSMUST00000064190 Fnbp4Q6ZQ03 1031 aa20■□□□□ 0.79
Rai1-201ENSMUST00000064190 Map7d2A2AG50 781 aa19.98■□□□□ 0.79
Rai1-201ENSMUST00000064190 Cwc22Q8C5N3 908 aaKnown RBP19.98■□□□□ 0.79
Rai1-201ENSMUST00000064190 Birc3O08863 600 aa19.97■□□□□ 0.79
Rai1-201ENSMUST00000064190 Ipo4Q8VI75 1082 aa19.97■□□□□ 0.79
Rai1-201ENSMUST00000064190 Krt82Q99M74 516 aa19.97■□□□□ 0.79
Rai1-201ENSMUST00000064190 Wdr78E9PYY5 807 aa19.96■□□□□ 0.79
Rai1-201ENSMUST00000064190 Chmp5Q9D7S9 219 aa19.96■□□□□ 0.79
Rai1-201ENSMUST00000064190 PtmsQ9D0J8 101 aaKnown RBP19.96■□□□□ 0.79
Rai1-201ENSMUST00000064190 Znf704Q9ERQ3 566 aa19.95■□□□□ 0.78
Rai1-201ENSMUST00000064190 A0A0U1RNP2 1173 aa19.94■□□□□ 0.78
Rai1-201ENSMUST00000064190 Tpm4Q6IRU2 248 aa19.94■□□□□ 0.78
Rai1-201ENSMUST00000064190 Rsph6aQ8CDR2 708 aa19.92■□□□□ 0.78
Rai1-201ENSMUST00000064190 Zfp777B9EKF4 885 aa19.91■□□□□ 0.78
Rai1-201ENSMUST00000064190 Gabpb2P81069 414 aa19.9■□□□□ 0.78
Rai1-201ENSMUST00000064190 Chrna2Q91X60 512 aa19.9■□□□□ 0.78
Rai1-201ENSMUST00000064190 EspnQ9ET47 871 aa19.9■□□□□ 0.78
Rai1-201ENSMUST00000064190 Gm21969J3QJZ1 289 aa19.89■□□□□ 0.78
Rai1-201ENSMUST00000064190 Rb1cc1Q9ESK9 1588 aa19.89■□□□□ 0.77
Rai1-201ENSMUST00000064190 Ccdc43Q9CR29 222 aaKnown RBP19.89■□□□□ 0.77
Rai1-201ENSMUST00000064190 Mtus2Q3UHD3 1353 aa19.88■□□□□ 0.77
Rai1-201ENSMUST00000064190 Pde3bQ61409 1100 aa19.88■□□□□ 0.77
Rai1-201ENSMUST00000064190 U2af1Q9D883 239 aaKnown RBP19.87■□□□□ 0.77
Rai1-201ENSMUST00000064190 Odf2A3KGV1 830 aaKnown RBP19.87■□□□□ 0.77
Rai1-201ENSMUST00000064190 Smarce1O54941 411 aaKnown RBP19.87■□□□□ 0.77
Rai1-201ENSMUST00000064190 Tpm2P58774 284 aa19.87■□□□□ 0.77
Rai1-201ENSMUST00000064190 Polr3gQ6NXY9 223 aa19.86■□□□□ 0.77
Rai1-201ENSMUST00000064190 Ppp1r18Q8BQ30 594 aa19.86■□□□□ 0.77
Rai1-201ENSMUST00000064190 Sf3a1Q8K4Z5 791 aaKnown RBP19.85■□□□□ 0.77
Rai1-201ENSMUST00000064190 Ciz1Q8VEH2 845 aa19.85■□□□□ 0.77
Rai1-201ENSMUST00000064190 Ipo8Q7TMY7 1010 aa19.85■□□□□ 0.77
Rai1-201ENSMUST00000064190 Slc4a10Q5DTL9 1118 aa19.84■□□□□ 0.77
Rai1-201ENSMUST00000064190 Mbd3Q9Z2D8 285 aaKnown RBP19.84■□□□□ 0.77
Rai1-201ENSMUST00000064190 Ccdc96Q9CR92 584 aa19.83■□□□□ 0.77
Rai1-201ENSMUST00000064190 Ccdc47Q9D024 483 aaKnown RBP19.82■□□□□ 0.76
Rai1-201ENSMUST00000064190 Tpm1P58771 284 aa19.82■□□□□ 0.76
Rai1-201ENSMUST00000064190 VgfQ0VGU4 617 aa19.8■□□□□ 0.76
Rai1-201ENSMUST00000064190 Tcerg1Q8CGF7 1100 aaKnown RBP19.8■□□□□ 0.76
Rai1-201ENSMUST00000064190 Fbxo2Q80UW2 297 aa19.8■□□□□ 0.76
Rai1-201ENSMUST00000064190 Psme1P97371 249 aa19.8■□□□□ 0.76
Rai1-201ENSMUST00000064190 Spag9Q58A65 1321 aaKnown RBP19.78■□□□□ 0.76
Rai1-201ENSMUST00000064190 Ipo9Q91YE6 1041 aa19.78■□□□□ 0.76
Rai1-201ENSMUST00000064190 Utp3Q9JI13 469 aaKnown RBP19.78■□□□□ 0.76
Rai1-201ENSMUST00000064190 FosbP13346 338 aa19.78■□□□□ 0.76
Rai1-201ENSMUST00000064190 ChgaP26339 463 aaKnown RBP19.78■□□□□ 0.76
Rai1-201ENSMUST00000064190 AppP12023 770 aa19.78■□□□□ 0.76
Rai1-201ENSMUST00000064190 MlecQ6ZQI3 291 aaKnown RBP19.78■□□□□ 0.76
Retrieved 100 of 22,080 RNA–protein pairs in 9.1 ms