RNA–Protein interactions for RNA: ENSMUST00000033898.9

Col4a1-201, Transcript of Collagen alpha-1(IV) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col4a1, Length 6,615 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1-201ENSMUST00000033898 Birc3O08863 600 aa18.19■□□□□ 0.5
Col4a1-201ENSMUST00000033898 Iffo2Q8R2V2 512 aa18.18■□□□□ 0.5
Col4a1-201ENSMUST00000033898 Nol10Q5RJG1 687 aaKnown RBP18.17■□□□□ 0.5
Col4a1-201ENSMUST00000033898 Hspa5P20029 655 aaKnown RBP18.16■□□□□ 0.5
Col4a1-201ENSMUST00000033898 Eif4g2Q62448 906 aaKnown RBP18.15■□□□□ 0.5
Col4a1-201ENSMUST00000033898 Q3TQI7 289 aaKnown RBP18.15■□□□□ 0.5
Col4a1-201ENSMUST00000033898 Prm3Q62100 101 aa18.15■□□□□ 0.5
Col4a1-201ENSMUST00000033898 CrebrfQ8CDG5 640 aaKnown RBP18.14■□□□□ 0.5
Col4a1-201ENSMUST00000033898 Pibf1E9Q6K3 756 aa18.14■□□□□ 0.49
Col4a1-201ENSMUST00000033898 Arid3cA6PWV5 409 aa18.13■□□□□ 0.49
Col4a1-201ENSMUST00000033898 MlecQ6ZQI3 291 aaKnown RBP18.13■□□□□ 0.49
Col4a1-201ENSMUST00000033898 Tnnt2P50752 301 aa18.13■□□□□ 0.49
Col4a1-201ENSMUST00000033898 Eea1Q8BL66 1411 aa18.13■□□□□ 0.49
Col4a1-201ENSMUST00000033898 Ifit1bl1D3Z6F0 470 aa18.13■□□□□ 0.49
Col4a1-201ENSMUST00000033898 HnrnpuQ8VEK3 800 aaKnown RBP18.12■□□□□ 0.49
Col4a1-201ENSMUST00000033898 MecomP14404 1042 aa18.12■□□□□ 0.49
Col4a1-201ENSMUST00000033898 Rundc1Q0VDN7 615 aa18.12■□□□□ 0.49
Col4a1-201ENSMUST00000033898 Supt16hQ920B9 1047 aa18.12■□□□□ 0.49
Col4a1-201ENSMUST00000033898 Rsf1E9PWW9 1441 aaKnown RBP18.11■□□□□ 0.49
Col4a1-201ENSMUST00000033898 U2af1Q9D883 239 aaKnown RBP18.11■□□□□ 0.49
Col4a1-201ENSMUST00000033898 Mfap1aC0HKD8 439 aaKnown RBP18.1■□□□□ 0.49
Col4a1-201ENSMUST00000033898 Mfap1bC0HKD9 439 aaKnown RBP18.1■□□□□ 0.49
Col4a1-201ENSMUST00000033898 Noc3lQ8VI84 807 aaKnown RBP18.1■□□□□ 0.49
Col4a1-201ENSMUST00000033898 Psme1P97371 249 aa18.1■□□□□ 0.49
Col4a1-201ENSMUST00000033898 GorabQ8BRM2 368 aa18.09■□□□□ 0.49
Col4a1-201ENSMUST00000033898 Chmp3Q9CQ10 224 aa18.09■□□□□ 0.49
Col4a1-201ENSMUST00000033898 Sart3Q9JLI8 962 aaKnown RBP18.09■□□□□ 0.49
Col4a1-201ENSMUST00000033898 Gm973E9Q295 1059 aa18.08■□□□□ 0.48
Col4a1-201ENSMUST00000033898 Ccdc18Q640L5 1455 aa18.07■□□□□ 0.48
Col4a1-201ENSMUST00000033898 Gpatch11Q3UFS4 262 aa18.07■□□□□ 0.48
Col4a1-201ENSMUST00000033898 Brpf1B2RRD7 1212 aa18.07■□□□□ 0.48
Col4a1-201ENSMUST00000033898 Ppm1fQ8CGA0 452 aa18.07■□□□□ 0.48
Col4a1-201ENSMUST00000033898 Vps53Q8CCB4 832 aa18.06■□□□□ 0.48
Col4a1-201ENSMUST00000033898 Zfp777B9EKF4 885 aa18.05■□□□□ 0.48
Col4a1-201ENSMUST00000033898 Gtf2e1Q9D0D5 440 aa18.05■□□□□ 0.48
Col4a1-201ENSMUST00000033898 Map4P27546 1125 aaKnown RBP18.04■□□□□ 0.48
Col4a1-201ENSMUST00000033898 Chmp5Q9D7S9 219 aa18.04■□□□□ 0.48
Col4a1-201ENSMUST00000033898 Sin3aQ60520 1274 aaKnown RBP18.04■□□□□ 0.48
Col4a1-201ENSMUST00000033898 Fhad1A6PWD2 1420 aa18.03■□□□□ 0.48
Col4a1-201ENSMUST00000033898 Tpm3-rs7D3Z2H9 248 aa18.03■□□□□ 0.48
Col4a1-201ENSMUST00000033898 MsnP26041 577 aaKnown RBP18.03■□□□□ 0.48
Col4a1-201ENSMUST00000033898 Dcaf11Q91VU6 549 aa18.02■□□□□ 0.48
Col4a1-201ENSMUST00000033898 Irx3P81067 507 aa18.02■□□□□ 0.48
Col4a1-201ENSMUST00000033898 Exoc6Q8R313 802 aa18.02■□□□□ 0.48
Col4a1-201ENSMUST00000033898 Txndc2Q6P902 515 aa18.02■□□□□ 0.47
Col4a1-201ENSMUST00000033898 Ercc6F8VPZ5 1481 aa18■□□□□ 0.47
Col4a1-201ENSMUST00000033898 Calcoco2A2A6M5 331 aa18■□□□□ 0.47
Col4a1-201ENSMUST00000033898 Dnai1Q8C0M8 701 aa17.99■□□□□ 0.47
Col4a1-201ENSMUST00000033898 Slc4a1apE9PX68 744 aa17.99■□□□□ 0.47
Col4a1-201ENSMUST00000033898 Tmf1B9EKI3 1091 aa17.98■□□□□ 0.47
Col4a1-201ENSMUST00000033898 CrbnQ8C7D2 445 aa17.98■□□□□ 0.47
Col4a1-201ENSMUST00000033898 Arid4aF8VPQ2 1261 aaKnown RBP17.98■□□□□ 0.47
Col4a1-201ENSMUST00000033898 Pkd2O35245 966 aa17.97■□□□□ 0.47
Col4a1-201ENSMUST00000033898 Mbd3Q9Z2D8 285 aaKnown RBP17.97■□□□□ 0.47
Col4a1-201ENSMUST00000033898 Kiaa0754Q69ZZ9 979 aa17.97■□□□□ 0.47
Col4a1-201ENSMUST00000033898 Golga2Q921M4 999 aa17.97■□□□□ 0.47
Col4a1-201ENSMUST00000033898 EspnQ9ET47 871 aa17.96■□□□□ 0.47
Col4a1-201ENSMUST00000033898 AU015836B2RUM3 263 aa17.96■□□□□ 0.47
Col4a1-201ENSMUST00000033898 Taok2Q6ZQ29 1240 aa17.96■□□□□ 0.47
Col4a1-201ENSMUST00000033898 Dnai2A2AC93 623 aa17.95■□□□□ 0.46
Col4a1-201ENSMUST00000033898 Ncbp3Q8BZR9 615 aaKnown RBP17.95■□□□□ 0.46
Col4a1-201ENSMUST00000033898 AknaQ80VW7 1404 aa17.95■□□□□ 0.46
Col4a1-201ENSMUST00000033898 Bcl11aQ9QYE3 773 aa17.94■□□□□ 0.46
Col4a1-201ENSMUST00000033898 Tomm22Q9CPQ3 142 aa17.94■□□□□ 0.46
Col4a1-201ENSMUST00000033898 Spag9Q58A65 1321 aaKnown RBP17.93■□□□□ 0.46
Col4a1-201ENSMUST00000033898 Pak3Q61036 559 aa17.93■□□□□ 0.46
Col4a1-201ENSMUST00000033898 Trak1Q6PD31 939 aa17.93■□□□□ 0.46
Col4a1-201ENSMUST00000033898 Tcerg1Q8CGF7 1100 aaKnown RBP17.92■□□□□ 0.46
Col4a1-201ENSMUST00000033898 Ksr2Q3UVC0 959 aa17.92■□□□□ 0.46
Col4a1-201ENSMUST00000033898 Slc4a10Q5DTL9 1118 aa17.91■□□□□ 0.46
Col4a1-201ENSMUST00000033898 R3hcc1Q8BSI6 488 aa17.91■□□□□ 0.46
Col4a1-201ENSMUST00000033898 SlkO54988 1233 aa17.91■□□□□ 0.46
Col4a1-201ENSMUST00000033898 Tpd52l1O54818 204 aa17.91■□□□□ 0.46
Col4a1-201ENSMUST00000033898 Cald1E9QA15 768 aaKnown RBP17.9■□□□□ 0.46
Col4a1-201ENSMUST00000033898 Samd1D3YXK1 519 aa17.9■□□□□ 0.46
Col4a1-201ENSMUST00000033898 Mia2Q91ZV0 1396 aa17.9■□□□□ 0.46
Col4a1-201ENSMUST00000033898 Ipo8Q7TMY7 1010 aa17.89■□□□□ 0.45
Col4a1-201ENSMUST00000033898 Golga3P55937 1487 aa17.89■□□□□ 0.45
Col4a1-201ENSMUST00000033898 Chrna2Q91X60 512 aa17.89■□□□□ 0.45
Col4a1-201ENSMUST00000033898 Ciz1Q8VEH2 845 aa17.88■□□□□ 0.45
Col4a1-201ENSMUST00000033898 Ccer1Q9CQL2 403 aa17.88■□□□□ 0.45
Col4a1-201ENSMUST00000033898 Ccdc146E9Q9F7 977 aa17.88■□□□□ 0.45
Col4a1-201ENSMUST00000033898 BccipQ9CWI3 316 aa17.88■□□□□ 0.45
Col4a1-201ENSMUST00000033898 SetQ9EQU5 289 aaKnown RBP17.87■□□□□ 0.45
Col4a1-201ENSMUST00000033898 RdxP26043 583 aaKnown RBP17.87■□□□□ 0.45
Col4a1-201ENSMUST00000033898 Kif27Q7M6Z4 1394 aa17.86■□□□□ 0.45
Col4a1-201ENSMUST00000033898 PtmsQ9D0J8 101 aaKnown RBP17.86■□□□□ 0.45
Col4a1-201ENSMUST00000033898 Pde3bQ61409 1100 aa17.85■□□□□ 0.45
Col4a1-201ENSMUST00000033898 Kri1Q8VDQ9 704 aaKnown RBP17.84■□□□□ 0.45
Col4a1-201ENSMUST00000033898 Zscan21Q07231 555 aa17.84■□□□□ 0.45
Col4a1-201ENSMUST00000033898 ChgaP26339 463 aaKnown RBP17.83■□□□□ 0.45
Col4a1-201ENSMUST00000033898 HdgfP51859 237 aaKnown RBP17.83■□□□□ 0.44
Col4a1-201ENSMUST00000033898 AppP12023 770 aa17.83■□□□□ 0.44
Col4a1-201ENSMUST00000033898 Fam193aQ8CGI1 1231 aaKnown RBP17.83■□□□□ 0.44
Col4a1-201ENSMUST00000033898 Tpm3P21107 285 aaKnown RBP17.82■□□□□ 0.44
Col4a1-201ENSMUST00000033898 Rock2P70336 1388 aa17.82■□□□□ 0.44
Col4a1-201ENSMUST00000033898 Cc2d1aQ8K1A6 943 aa17.82■□□□□ 0.44
Col4a1-201ENSMUST00000033898 Smarce1O54941 411 aaKnown RBP17.81■□□□□ 0.44
Col4a1-201ENSMUST00000033898 Rpap1Q80TE0 1409 aa17.81■□□□□ 0.44
Col4a1-201ENSMUST00000033898 Drc7Q6V3W6 876 aa17.81■□□□□ 0.44
Retrieved 100 of 22,080 RNA–protein pairs in 26.9 ms