RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 Speer4f1Q9D5Q6 258 aa21.26■□□□□ 0.99
Ubfd1-201ENSMUST00000033158 Baz1bQ9Z277 1479 aa21.26■□□□□ 0.99
Ubfd1-201ENSMUST00000033158 AknaQ80VW7 1404 aa21.26■□□□□ 0.99
Ubfd1-201ENSMUST00000033158 Sycp2Q9CUU3 1500 aa21.25■□□□□ 0.99
Ubfd1-201ENSMUST00000033158 Lemd3Q9WU40 921 aa21.24■□□□□ 0.99
Ubfd1-201ENSMUST00000033158 Chmp5Q9D7S9 219 aa21.24■□□□□ 0.99
Ubfd1-201ENSMUST00000033158 KnstrnQ9D9Z1 312 aaKnown RBP21.23■□□□□ 0.99
Ubfd1-201ENSMUST00000033158 Mak16Q8BGS0 296 aaKnown RBP21.22■□□□□ 0.99
Ubfd1-201ENSMUST00000033158 Cux2P70298 1426 aa21.22■□□□□ 0.99
Ubfd1-201ENSMUST00000033158 Supt16hQ920B9 1047 aa21.21■□□□□ 0.99
Ubfd1-201ENSMUST00000033158 Crybg2B7ZCC2 1516 aa21.2■□□□□ 0.99
Ubfd1-201ENSMUST00000033158 Rtn4Q99P72 1162 aaKnown RBP21.2■□□□□ 0.98
Ubfd1-201ENSMUST00000033158 Stk26Q99JT2 416 aa21.19■□□□□ 0.98
Ubfd1-201ENSMUST00000033158 Hsp90b1P08113 802 aaKnown RBP21.19■□□□□ 0.98
Ubfd1-201ENSMUST00000033158 Ppp1r18Q8BQ30 594 aa21.18■□□□□ 0.98
Ubfd1-201ENSMUST00000033158 Znf326O88291 580 aa21.18■□□□□ 0.98
Ubfd1-201ENSMUST00000033158 HnrnpuQ8VEK3 800 aaKnown RBP21.17■□□□□ 0.98
Ubfd1-201ENSMUST00000033158 Carmil1Q6EDY6 1374 aa21.16■□□□□ 0.98
Ubfd1-201ENSMUST00000033158 U2af1Q9D883 239 aaKnown RBP21.16■□□□□ 0.98
Ubfd1-201ENSMUST00000033158 Pes1Q9EQ61 584 aaKnown RBP21.15■□□□□ 0.98
Ubfd1-201ENSMUST00000033158 Dcaf11Q91VU6 549 aa21.14■□□□□ 0.97
Ubfd1-201ENSMUST00000033158 Srcin1Q9QWI6 1250 aa21.13■□□□□ 0.97
Ubfd1-201ENSMUST00000033158 Dhx57Q6P5D3 1388 aaKnown RBP21.13■□□□□ 0.97
Ubfd1-201ENSMUST00000033158 Casc1Q6TDU8 730 aa21.13■□□□□ 0.97
Ubfd1-201ENSMUST00000033158 Nup155Q99P88 1391 aaKnown RBP21.13■□□□□ 0.97
Ubfd1-201ENSMUST00000033158 Cecr2E9Q2Z1 1453 aa21.13■□□□□ 0.97
Ubfd1-201ENSMUST00000033158 Rtf1A2AQ19 715 aaKnown RBP21.12■□□□□ 0.97
Ubfd1-201ENSMUST00000033158 Golga2Q921M4 999 aa21.12■□□□□ 0.97
Ubfd1-201ENSMUST00000033158 U2surpQ6NV83 1029 aaKnown RBP21.11■□□□□ 0.97
Ubfd1-201ENSMUST00000033158 Rapgef2Q8CHG7 1496 aa21.11■□□□□ 0.97
Ubfd1-201ENSMUST00000033158 Spryd3E9Q9B3 442 aa21.1■□□□□ 0.97
Ubfd1-201ENSMUST00000033158 Rock2P70336 1388 aa21.09■□□□□ 0.97
Ubfd1-201ENSMUST00000033158 EspnQ9ET47 871 aa21.09■□□□□ 0.97
Ubfd1-201ENSMUST00000033158 Kif3bQ61771 747 aa21.08■□□□□ 0.96
Ubfd1-201ENSMUST00000033158 MccE9PWI3 1003 aa21.07■□□□□ 0.96
Ubfd1-201ENSMUST00000033158 Plin1Q8CGN5 517 aa21.07■□□□□ 0.96
Ubfd1-201ENSMUST00000033158 Tmco5bQ80X59 307 aa21.07■□□□□ 0.96
Ubfd1-201ENSMUST00000033158 PnnO35691 725 aaKnown RBP21.07■□□□□ 0.96
Ubfd1-201ENSMUST00000033158 Plekhh2Q8C115 1491 aa21.06■□□□□ 0.96
Ubfd1-201ENSMUST00000033158 Phldb1Q6PDH0 1371 aaKnown RBP21.06■□□□□ 0.96
Ubfd1-201ENSMUST00000033158 Dnai1Q8C0M8 701 aa21.05■□□□□ 0.96
Ubfd1-201ENSMUST00000033158 Birc3O08863 600 aa21.04■□□□□ 0.96
Ubfd1-201ENSMUST00000033158 Ccnb3Q810T2 1396 aa21.04■□□□□ 0.96
Ubfd1-201ENSMUST00000033158 Sart3Q9JLI8 962 aaKnown RBP21.03■□□□□ 0.96
Ubfd1-201ENSMUST00000033158 Sart1Q9Z315 806 aaKnown RBP21.01■□□□□ 0.95
Ubfd1-201ENSMUST00000033158 Slc4a1apE9PX68 744 aa21■□□□□ 0.95
Ubfd1-201ENSMUST00000033158 Ecm2Q5FW85 670 aa20.99■□□□□ 0.95
Ubfd1-201ENSMUST00000033158 Cluap1Q8R3P7 413 aa20.98■□□□□ 0.95
Ubfd1-201ENSMUST00000033158 Psme1P97371 249 aa20.98■□□□□ 0.95
Ubfd1-201ENSMUST00000033158 UacaQ8CGB3 1411 aa20.98■□□□□ 0.95
Ubfd1-201ENSMUST00000033158 CrbnQ8C7D2 445 aa20.98■□□□□ 0.95
Ubfd1-201ENSMUST00000033158 Stard8Q8K031 1019 aa20.98■□□□□ 0.95
Ubfd1-201ENSMUST00000033158 Sh3bp5Q9Z131 463 aa20.97■□□□□ 0.95
Ubfd1-201ENSMUST00000033158 Atad2bE9Q166 1460 aaKnown RBP20.97■□□□□ 0.95
Ubfd1-201ENSMUST00000033158 Smarca2Q6DIC0 1577 aa20.97■□□□□ 0.95
Ubfd1-201ENSMUST00000033158 Q3TQI7 289 aaKnown RBP20.96■□□□□ 0.95
Ubfd1-201ENSMUST00000033158 Txndc2Q6P902 515 aa20.96■□□□□ 0.95
Ubfd1-201ENSMUST00000033158 LrpprcQ6PB66 1392 aaKnown RBP20.96■□□□□ 0.95
Ubfd1-201ENSMUST00000033158 Synj1Q8CHC4 1574 aa20.96■□□□□ 0.95
Ubfd1-201ENSMUST00000033158 PtmsQ9D0J8 101 aaKnown RBP20.94■□□□□ 0.94
Ubfd1-201ENSMUST00000033158 Clstn1Q9EPL2 979 aa20.94■□□□□ 0.94
Ubfd1-201ENSMUST00000033158 Irx3P81067 507 aa20.94■□□□□ 0.94
Ubfd1-201ENSMUST00000033158 Znf330Q922H9 316 aa20.94■□□□□ 0.94
Ubfd1-201ENSMUST00000033158 Fan1Q69ZT1 1020 aa20.93■□□□□ 0.94
Ubfd1-201ENSMUST00000033158 Pde3bQ61409 1100 aa20.93■□□□□ 0.94
Ubfd1-201ENSMUST00000033158 Ksr2Q3UVC0 959 aa20.93■□□□□ 0.94
Ubfd1-201ENSMUST00000033158 Ipo8Q7TMY7 1010 aa20.92■□□□□ 0.94
Ubfd1-201ENSMUST00000033158 Usp47Q8BY87 1376 aa20.92■□□□□ 0.94
Ubfd1-201ENSMUST00000033158 Znf316Q6PGE4 1016 aa20.92■□□□□ 0.94
Ubfd1-201ENSMUST00000033158 Ipo9Q91YE6 1041 aa20.91■□□□□ 0.94
Ubfd1-201ENSMUST00000033158 Rassf8Q8CJ96 419 aa20.9■□□□□ 0.94
Ubfd1-201ENSMUST00000033158 Rsph4aQ8BYM7 716 aa20.89■□□□□ 0.93
Ubfd1-201ENSMUST00000033158 Ccar1Q8CH18 1146 aaKnown RBP20.89■□□□□ 0.93
Ubfd1-201ENSMUST00000033158 Spag9Q58A65 1321 aaKnown RBP20.88■□□□□ 0.93
Ubfd1-201ENSMUST00000033158 Sox12Q04890 314 aa20.88■□□□□ 0.93
Ubfd1-201ENSMUST00000033158 Eif4g2Q62448 906 aaKnown RBP20.88■□□□□ 0.93
Ubfd1-201ENSMUST00000033158 Pank3Q8R2W9 370 aa20.87■□□□□ 0.93
Ubfd1-201ENSMUST00000033158 Adam1bQ8R534 806 aa20.87■□□□□ 0.93
Ubfd1-201ENSMUST00000033158 Smg6P61406 1418 aaKnown RBP20.86■□□□□ 0.93
Ubfd1-201ENSMUST00000033158 Mfap1aC0HKD8 439 aaKnown RBP20.85■□□□□ 0.93
Ubfd1-201ENSMUST00000033158 Mfap1bC0HKD9 439 aaKnown RBP20.85■□□□□ 0.93
Ubfd1-201ENSMUST00000033158 Tnnt1O88346 262 aa20.85■□□□□ 0.93
Ubfd1-201ENSMUST00000033158 Dnttip2Q8R2M2 758 aaKnown RBP20.85■□□□□ 0.93
Ubfd1-201ENSMUST00000033158 CenpjQ569L8 1344 aa20.85■□□□□ 0.93
Ubfd1-201ENSMUST00000033158 AU015836B2RUM3 263 aa20.85■□□□□ 0.93
Ubfd1-201ENSMUST00000033158 Utp14aQ640M1 767 aaKnown RBP20.84■□□□□ 0.93
Ubfd1-201ENSMUST00000033158 Dhx29Q6PGC1 1365 aaKnown RBP20.83■□□□□ 0.93
Ubfd1-201ENSMUST00000033158 Erich6bQ9D4S6 220 aa20.81■□□□□ 0.92
Ubfd1-201ENSMUST00000033158 Tsen2Q6P7W5 460 aa20.81■□□□□ 0.92
Ubfd1-201ENSMUST00000033158 Senp3Q9EP97 568 aaKnown RBP20.8■□□□□ 0.92
Ubfd1-201ENSMUST00000033158 WrnO09053 1401 aa20.8■□□□□ 0.92
Ubfd1-201ENSMUST00000033158 Inpp5dQ9ES52 1191 aa20.79■□□□□ 0.92
Ubfd1-201ENSMUST00000033158 MecomP14404 1042 aa20.79■□□□□ 0.92
Ubfd1-201ENSMUST00000033158 HdgfP51859 237 aaKnown RBP20.79■□□□□ 0.92
Ubfd1-201ENSMUST00000033158 Iffo2Q8R2V2 512 aa20.79■□□□□ 0.92
Ubfd1-201ENSMUST00000033158 Smarca4Q3TKT4 1613 aaKnown RBP20.79■□□□□ 0.92
Ubfd1-201ENSMUST00000033158 Pcmtd1P59913 357 aa20.79■□□□□ 0.92
Ubfd1-201ENSMUST00000033158 Nol10Q5RJG1 687 aaKnown RBP20.78■□□□□ 0.92
Ubfd1-201ENSMUST00000033158 Anapc15P60007 132 aa20.78■□□□□ 0.92
Ubfd1-201ENSMUST00000033158 GorabQ8BRM2 368 aa20.78■□□□□ 0.92
Retrieved 100 of 22,080 RNA–protein pairs in 31.5 ms