RNA–Protein interactions for RNA: ENSMUST00000022623.12

Trim35-201, Transcript of Tripartite motif-containing protein 35, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim35, Length 3,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35-201ENSMUST00000022623 NrdcQ8BHG1 1161 aa16.34■□□□□ 0.21
Trim35-201ENSMUST00000022623 TchhA0A0B4J1F9 1599 aa16.33■□□□□ 0.21
Trim35-201ENSMUST00000022623 Soga1E1U8D0 1418 aa16.33■□□□□ 0.2
Trim35-201ENSMUST00000022623 Gm13697A2AK42 830 aa16.32■□□□□ 0.2
Trim35-201ENSMUST00000022623 Map4P27546 1125 aaKnown RBP16.32■□□□□ 0.2
Trim35-201ENSMUST00000022623 Mug1P28665 1476 aa16.31■□□□□ 0.2
Trim35-201ENSMUST00000022623 BC005561E9Q5E2 1589 aa16.31■□□□□ 0.2
Trim35-201ENSMUST00000022623 Ncoa3O09000 1398 aa16.29■□□□□ 0.2
Trim35-201ENSMUST00000022623 Sart1Q9Z315 806 aaKnown RBP16.27■□□□□ 0.2
Trim35-201ENSMUST00000022623 Neo1P97798 1493 aa16.27■□□□□ 0.2
Trim35-201ENSMUST00000022623 Usp47Q8BY87 1376 aa16.27■□□□□ 0.19
Trim35-201ENSMUST00000022623 CatipB9EKE5 520 aa16.26■□□□□ 0.19
Trim35-201ENSMUST00000022623 Dhx57Q6P5D3 1388 aaKnown RBP16.26■□□□□ 0.19
Trim35-201ENSMUST00000022623 Mrs2Q5NCE8 434 aa16.25■□□□□ 0.19
Trim35-201ENSMUST00000022623 Pknox2Q8BG99 474 aa16.25■□□□□ 0.19
Trim35-201ENSMUST00000022623 Abcc5Q9R1X5 1436 aa16.24■□□□□ 0.19
Trim35-201ENSMUST00000022623 Ankrd36D3Z4K0 1415 aa16.23■□□□□ 0.19
Trim35-201ENSMUST00000022623 Clstn2Q9ER65 966 aa16.23■□□□□ 0.19
Trim35-201ENSMUST00000022623 Nup160Q9Z0W3 1402 aaKnown RBP16.22■□□□□ 0.19
Trim35-201ENSMUST00000022623 Prdm10Q3UTQ7 1184 aa16.22■□□□□ 0.19
Trim35-201ENSMUST00000022623 Nup155Q99P88 1391 aaKnown RBP16.21■□□□□ 0.19
Trim35-201ENSMUST00000022623 Fgd6Q69ZL1 1399 aa16.2■□□□□ 0.18
Trim35-201ENSMUST00000022623 Card11Q8CIS0 1159 aa16.2■□□□□ 0.18
Trim35-201ENSMUST00000022623 Ncoa2Q61026 1462 aa16.2■□□□□ 0.18
Trim35-201ENSMUST00000022623 Kdm5bQ80Y84 1544 aa16.19■□□□□ 0.18
Trim35-201ENSMUST00000022623 Shroom2A2ALU4 1481 aa16.19■□□□□ 0.18
Trim35-201ENSMUST00000022623 Rundc1Q0VDN7 615 aa16.18■□□□□ 0.18
Trim35-201ENSMUST00000022623 Tnnt3Q9QZ47 272 aa16.18■□□□□ 0.18
Trim35-201ENSMUST00000022623 Ccdc141E9Q8Q6 1531 aa16.18■□□□□ 0.18
Trim35-201ENSMUST00000022623 Wwc2Q6NXJ0 1187 aa16.18■□□□□ 0.18
Trim35-201ENSMUST00000022623 Plppr3Q7TPB0 716 aa16.17■□□□□ 0.18
Trim35-201ENSMUST00000022623 Fam163aQ8CAA5 168 aa16.17■□□□□ 0.18
Trim35-201ENSMUST00000022623 Kdm2aP59997 1161 aa16.17■□□□□ 0.18
Trim35-201ENSMUST00000022623 Abca5Q8K448 1642 aa16.16■□□□□ 0.18
Trim35-201ENSMUST00000022623 Magi1Q6RHR9 1471 aa16.16■□□□□ 0.18
Trim35-201ENSMUST00000022623 Ttll5Q8CHB8 1328 aa16.15■□□□□ 0.18
Trim35-201ENSMUST00000022623 Dhx9O70133 1380 aaKnown RBP16.15■□□□□ 0.18
Trim35-201ENSMUST00000022623 Ttbk1Q6PCN3 1308 aa16.15■□□□□ 0.18
Trim35-201ENSMUST00000022623 Adamts12Q811B3 1600 aa16.14■□□□□ 0.17
Trim35-201ENSMUST00000022623 Lrriq1Q0P5X1 1673 aa16.14■□□□□ 0.17
Trim35-201ENSMUST00000022623 Peg3Q3URU2 1571 aa16.14■□□□□ 0.17
Trim35-201ENSMUST00000022623 Mroh3A0A1D5RM54 893 aa16.13■□□□□ 0.17
Trim35-201ENSMUST00000022623 Arhgef40Q3UPH7 1517 aa16.12■□□□□ 0.17
Trim35-201ENSMUST00000022623 Gm14025A2AP89 1413 aa16.11■□□□□ 0.17
Trim35-201ENSMUST00000022623 Rapgef6Q5NCJ1 1609 aa16.1■□□□□ 0.17
Trim35-201ENSMUST00000022623 Lmtk2Q3TYD6 1471 aa16.1■□□□□ 0.17
Trim35-201ENSMUST00000022623 Anp32bQ9EST5 272 aaKnown RBP16.09■□□□□ 0.17
Trim35-201ENSMUST00000022623 Stk24Q99KH8 431 aa16.08■□□□□ 0.17
Trim35-201ENSMUST00000022623 Ifit1bl1D3Z6F0 470 aa16.08■□□□□ 0.16
Trim35-201ENSMUST00000022623 Kif3bQ61771 747 aa16.07■□□□□ 0.16
Trim35-201ENSMUST00000022623 Map3k5O35099 1380 aa16.07■□□□□ 0.16
Trim35-201ENSMUST00000022623 Prex2Q3LAC4 1598 aa16.07■□□□□ 0.16
Trim35-201ENSMUST00000022623 P3h3Q8CG70 732 aa16.06■□□□□ 0.16
Trim35-201ENSMUST00000022623 Abca16E9PWJ7 1678 aa16.06■□□□□ 0.16
Trim35-201ENSMUST00000022623 Atp1b4Q99ME6 356 aa16.06■□□□□ 0.16
Trim35-201ENSMUST00000022623 Il16O54824 1322 aa16.05■□□□□ 0.16
Trim35-201ENSMUST00000022623 SafbD3YXK2 937 aaKnown RBP16.05■□□□□ 0.16
Trim35-201ENSMUST00000022623 Arhgap5P97393 1501 aa16.05■□□□□ 0.16
Trim35-201ENSMUST00000022623 Fgd1P52734 960 aa16.05■□□□□ 0.16
Trim35-201ENSMUST00000022623 Exoc6Q8R313 802 aa16.04■□□□□ 0.16
Trim35-201ENSMUST00000022623 Lemd3Q9WU40 921 aa16.04■□□□□ 0.16
Trim35-201ENSMUST00000022623 Fam71e1A1L3C1 212 aa16.03■□□□□ 0.16
Trim35-201ENSMUST00000022623 Spag9Q58A65 1321 aaKnown RBP16.03■□□□□ 0.16
Trim35-201ENSMUST00000022623 Naip5Q9R016 1403 aa16.02■□□□□ 0.16
Trim35-201ENSMUST00000022623 Cwc22Q8C5N3 908 aaKnown RBP16.02■□□□□ 0.16
Trim35-201ENSMUST00000022623 Adgrb2Q8CGM1 1561 aa16.01■□□□□ 0.15
Trim35-201ENSMUST00000022623 Hdac5Q9Z2V6 1113 aa15.99■□□□□ 0.15
Trim35-201ENSMUST00000022623 Dapk1Q80YE7 1442 aa15.99■□□□□ 0.15
Trim35-201ENSMUST00000022623 Abcc2Q8VI47 1543 aa15.99■□□□□ 0.15
Trim35-201ENSMUST00000022623 Adcy10Q8C0T9 1614 aa15.99■□□□□ 0.15
Trim35-201ENSMUST00000022623 Rusc2Q80U22 1514 aa15.98■□□□□ 0.15
Trim35-201ENSMUST00000022623 Pabpn1Q8CCS6 302 aaKnown RBP15.98■□□□□ 0.15
Trim35-201ENSMUST00000022623 Rfx7F8VPJ6 1459 aa15.97■□□□□ 0.15
Trim35-201ENSMUST00000022623 Smg6P61406 1418 aaKnown RBP15.97■□□□□ 0.15
Trim35-201ENSMUST00000022623 Trappc8E9PWG2 1437 aa15.96■□□□□ 0.15
Trim35-201ENSMUST00000022623 Pde4cQ3UEI1 686 aa15.96■□□□□ 0.15
Trim35-201ENSMUST00000022623 Rad21Q61550 635 aaKnown RBP15.96■□□□□ 0.15
Trim35-201ENSMUST00000022623 Setd1bQ8CFT2 1985 aa15.95■□□□□ 0.14
Trim35-201ENSMUST00000022623 Kdm6bQ5NCY0 1641 aa15.95■□□□□ 0.14
Trim35-201ENSMUST00000022623 Gm20521D3Z5F7 333 aa15.95■□□□□ 0.14
Trim35-201ENSMUST00000022623 Arhgef11Q68FM7 1552 aa15.94■□□□□ 0.14
Trim35-201ENSMUST00000022623 Calr4Q3TQS0 420 aa15.93■□□□□ 0.14
Trim35-201ENSMUST00000022623 Mlh3A0A1Y7VMP7 1443 aa15.93■□□□□ 0.14
Trim35-201ENSMUST00000022623 Dennd4bQ3U1Y4 1499 aa15.93■□□□□ 0.14
Trim35-201ENSMUST00000022623 Pbrm1Q8BSQ9 1634 aaKnown RBP15.93■□□□□ 0.14
Trim35-201ENSMUST00000022623 Fancd2Q80V62 1450 aa15.92■□□□□ 0.14
Trim35-201ENSMUST00000022623 Arhgef12Q8R4H2 1543 aaKnown RBP15.92■□□□□ 0.14
Trim35-201ENSMUST00000022623 Gcc2Q8CHG3 1679 aa15.91■□□□□ 0.14
Trim35-201ENSMUST00000022623 Ppp1r18Q8BQ30 594 aa15.91■□□□□ 0.14
Trim35-201ENSMUST00000022623 Cd109Q8R422 1442 aa15.91■□□□□ 0.14
Trim35-201ENSMUST00000022623 Rprd2Q6NXI6 1469 aaKnown RBP15.9■□□□□ 0.14
Trim35-201ENSMUST00000022623 Srpk2O54781 681 aaKnown RBP15.9■□□□□ 0.14
Trim35-201ENSMUST00000022623 Atp10dQ8K2X1 1416 aa15.88■□□□□ 0.13
Trim35-201ENSMUST00000022623 Cnga1P29974 684 aa15.87■□□□□ 0.13
Trim35-201ENSMUST00000022623 Kdm3bQ6ZPY7 1562 aa15.87■□□□□ 0.13
Trim35-201ENSMUST00000022623 Ofd1Q80Z25 1017 aa15.87■□□□□ 0.13
Trim35-201ENSMUST00000022623 Ythdc2B2RR83 1445 aaKnown RBP15.87■□□□□ 0.13
Trim35-201ENSMUST00000022623 Gm13695A2AK44 830 aa15.86■□□□□ 0.13
Trim35-201ENSMUST00000022623 Abcc1O35379 1528 aa15.86■□□□□ 0.13
Trim35-201ENSMUST00000022623 Caskin1Q6P9K8 1431 aa15.86■□□□□ 0.13
Retrieved 100 of 22,080 RNA–protein pairs in 222.6 ms