RNA–Protein interactions for RNA: ENSMUST00000022623.12

Trim35-201, Transcript of Tripartite motif-containing protein 35, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim35, Length 3,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35-201ENSMUST00000022623 NischQ80TM9 1593 aa22.21■■□□□ 1.15
Trim35-201ENSMUST00000022623 Rhox8Q6VSS7 320 aa21.77■■□□□ 1.08
Trim35-201ENSMUST00000022623 Abcc9P70170 1546 aa21.28■■□□□ 1
Trim35-201ENSMUST00000022623 Gm35339A0A140LHH9 1649 aa21.09■□□□□ 0.97
Trim35-201ENSMUST00000022623 Abcc8B2RUS7 1588 aa20.93■□□□□ 0.94
Trim35-201ENSMUST00000022623 Ccdc136Q3TVA9 1136 aa20.08■□□□□ 0.81
Trim35-201ENSMUST00000022623 Rtl1Q7M732 1744 aa19.58■□□□□ 0.72
Trim35-201ENSMUST00000022623 Ccdc180J3QNE4 1664 aa19.48■□□□□ 0.71
Trim35-201ENSMUST00000022623 ScribQ80U72 1612 aa19.47■□□□□ 0.71
Trim35-201ENSMUST00000022623 Rb1cc1Q9ESK9 1588 aa19.46■□□□□ 0.71
Trim35-201ENSMUST00000022623 Zcchc6Q5BLK4 1491 aaKnown RBP19.45■□□□□ 0.7
Trim35-201ENSMUST00000022623 Ehmt2Q9Z148 1263 aaKnown RBP19.42■□□□□ 0.7
Trim35-201ENSMUST00000022623 Trim41Q5NCC3 630 aa19.33■□□□□ 0.69
Trim35-201ENSMUST00000022623 Kdm5dQ62240 1548 aa19.32■□□□□ 0.68
Trim35-201ENSMUST00000022623 Cngb1E1AZ71 1325 aa19.28■□□□□ 0.68
Trim35-201ENSMUST00000022623 NacadQ5SWP3 1504 aa19.23■□□□□ 0.67
Trim35-201ENSMUST00000022623 Dcaf1Q80TR8 1506 aa19.2■□□□□ 0.66
Trim35-201ENSMUST00000022623 Esf1Q3V1V3 845 aaKnown RBP19.16■□□□□ 0.66
Trim35-201ENSMUST00000022623 Baz1aO88379 1555 aa19.1■□□□□ 0.65
Trim35-201ENSMUST00000022623 Gab3Q8BSM5 595 aa19.06■□□□□ 0.64
Trim35-201ENSMUST00000022623 HrcG5E8J6 738 aa19■□□□□ 0.63
Trim35-201ENSMUST00000022623 Sycp2Q9CUU3 1500 aa18.74■□□□□ 0.59
Trim35-201ENSMUST00000022623 Chic1Q8CBW7 227 aa18.62■□□□□ 0.57
Trim35-201ENSMUST00000022623 Brd4Q9ESU6 1400 aaKnown RBP18.57■□□□□ 0.56
Trim35-201ENSMUST00000022623 Rpgrip1Q9EPQ2 1331 aa18.55■□□□□ 0.56
Trim35-201ENSMUST00000022623 Smarca2Q6DIC0 1577 aa18.52■□□□□ 0.56
Trim35-201ENSMUST00000022623 Cecr2E9Q2Z1 1453 aa18.51■□□□□ 0.55
Trim35-201ENSMUST00000022623 Crybg2B7ZCC2 1516 aa18.51■□□□□ 0.55
Trim35-201ENSMUST00000022623 Myt1lP97500 1187 aa18.49■□□□□ 0.55
Trim35-201ENSMUST00000022623 Acin1Q9JIX8 1338 aaKnown RBP18.45■□□□□ 0.54
Trim35-201ENSMUST00000022623 Npm2Q80W85 207 aa18.43■□□□□ 0.54
Trim35-201ENSMUST00000022623 Il27Q8K3I6 234 aa18.38■□□□□ 0.53
Trim35-201ENSMUST00000022623 Cep164Q5DU05 1446 aa18.36■□□□□ 0.53
Trim35-201ENSMUST00000022623 Rsf1E9PWW9 1441 aaKnown RBP18.3■□□□□ 0.52
Trim35-201ENSMUST00000022623 Golga3P55937 1487 aa18.25■□□□□ 0.51
Trim35-201ENSMUST00000022623 Zeb1Q64318 1117 aa18.22■□□□□ 0.51
Trim35-201ENSMUST00000022623 BicraF8VPZ9 1578 aa18.21■□□□□ 0.51
Trim35-201ENSMUST00000022623 Ccdc88bQ4QRL3 1481 aa18.2■□□□□ 0.5
Trim35-201ENSMUST00000022623 Synj1Q8CHC4 1574 aa18.18■□□□□ 0.5
Trim35-201ENSMUST00000022623 UbtfP25976 765 aaKnown RBP18.16■□□□□ 0.5
Trim35-201ENSMUST00000022623 CftrP26361 1476 aa18.15■□□□□ 0.5
Trim35-201ENSMUST00000022623 Pcgf6Q99NA9 353 aa18.05■□□□□ 0.48
Trim35-201ENSMUST00000022623 DiexfQ8BTT6 772 aaKnown RBP18.01■□□□□ 0.47
Trim35-201ENSMUST00000022623 Ap3b1Q9Z1T1 1105 aa17.95■□□□□ 0.46
Trim35-201ENSMUST00000022623 Smarca4Q3TKT4 1613 aaKnown RBP17.94■□□□□ 0.46
Trim35-201ENSMUST00000022623 Myt1Q8CFC2 1127 aa17.89■□□□□ 0.45
Trim35-201ENSMUST00000022623 Mier1Q5UAK0 511 aa17.88■□□□□ 0.45
Trim35-201ENSMUST00000022623 Pds5bQ4VA53 1446 aaKnown RBP17.85■□□□□ 0.45
Trim35-201ENSMUST00000022623 Cttnbp2B9EJA2 1648 aa17.84■□□□□ 0.45
Trim35-201ENSMUST00000022623 Plekhg3Q4VAC9 1341 aa17.83■□□□□ 0.45
Trim35-201ENSMUST00000022623 Atad2bE9Q166 1460 aaKnown RBP17.8■□□□□ 0.44
Trim35-201ENSMUST00000022623 Ubl4bQ9CQ84 188 aa17.8■□□□□ 0.44
Trim35-201ENSMUST00000022623 Npm1Q61937 292 aaKnown RBP17.79■□□□□ 0.44
Trim35-201ENSMUST00000022623 Kif15Q6P9L6 1387 aa17.78■□□□□ 0.44
Trim35-201ENSMUST00000022623 Iqgap2Q3UQ44 1575 aa17.78■□□□□ 0.44
Trim35-201ENSMUST00000022623 Fmn1Q05860 1466 aa17.72■□□□□ 0.43
Trim35-201ENSMUST00000022623 Wdr66E9Q743 1299 aa17.71■□□□□ 0.43
Trim35-201ENSMUST00000022623 CenpbP27790 599 aa17.71■□□□□ 0.43
Trim35-201ENSMUST00000022623 NefmP08553 848 aa17.71■□□□□ 0.43
Trim35-201ENSMUST00000022623 Ercc6F8VPZ5 1481 aa17.69■□□□□ 0.42
Trim35-201ENSMUST00000022623 Las1lA2BE28 776 aaKnown RBP17.68■□□□□ 0.42
Trim35-201ENSMUST00000022623 Cc2d2aQ8CFW7 1633 aa17.67■□□□□ 0.42
Trim35-201ENSMUST00000022623 Clip1Q922J3 1391 aa17.65■□□□□ 0.42
Trim35-201ENSMUST00000022623 Supt5hO55201 1082 aaKnown RBP17.62■□□□□ 0.41
Trim35-201ENSMUST00000022623 Lmod2Q3UHZ5 550 aa17.58■□□□□ 0.41
Trim35-201ENSMUST00000022623 Cep162Q6ZQ06 1403 aa17.57■□□□□ 0.4
Trim35-201ENSMUST00000022623 Rapgef2Q8CHG7 1496 aa17.56■□□□□ 0.4
Trim35-201ENSMUST00000022623 Top2bQ64511 1612 aa17.55■□□□□ 0.4
Trim35-201ENSMUST00000022623 Ppargc1bQ8VHJ7 1014 aa17.54■□□□□ 0.4
Trim35-201ENSMUST00000022623 Ube2uB1AUC4 352 aa17.53■□□□□ 0.4
Trim35-201ENSMUST00000022623 Frmpd1A2AKB4 1549 aa17.49■□□□□ 0.39
Trim35-201ENSMUST00000022623 Fam50aQ9WV03 339 aaKnown RBP17.49■□□□□ 0.39
Trim35-201ENSMUST00000022623 Amer1Q7TS75 1132 aa17.43■□□□□ 0.38
Trim35-201ENSMUST00000022623 Ccdc18Q640L5 1455 aa17.43■□□□□ 0.38
Trim35-201ENSMUST00000022623 Setd5Q5XJV7 1441 aa17.41■□□□□ 0.38
Trim35-201ENSMUST00000022623 Top2aQ01320 1528 aaKnown RBP17.4■□□□□ 0.38
Trim35-201ENSMUST00000022623 Cux2P70298 1426 aa17.39■□□□□ 0.37
Trim35-201ENSMUST00000022623 Bcl11aQ9QYE3 773 aa17.38■□□□□ 0.37
Trim35-201ENSMUST00000022623 Eid3Q3V124 375 aa17.38■□□□□ 0.37
Trim35-201ENSMUST00000022623 Phldb1Q6PDH0 1371 aaKnown RBP17.37■□□□□ 0.37
Trim35-201ENSMUST00000022623 Wdr62Q3U3T8 1523 aa17.33■□□□□ 0.37
Trim35-201ENSMUST00000022623 Eea1Q8BL66 1411 aa17.29■□□□□ 0.36
Trim35-201ENSMUST00000022623 PtprkP35822 1457 aa17.29■□□□□ 0.36
Trim35-201ENSMUST00000022623 BlmO88700 1416 aa17.28■□□□□ 0.36
Trim35-201ENSMUST00000022623 TonslQ6NZL6 1363 aa17.28■□□□□ 0.36
Trim35-201ENSMUST00000022623 Sall2Q9QX96 1004 aa17.24■□□□□ 0.35
Trim35-201ENSMUST00000022623 Baz1bQ9Z277 1479 aa17.22■□□□□ 0.35
Trim35-201ENSMUST00000022623 Dnajc5bQ9CQ94 199 aa17.16■□□□□ 0.34
Trim35-201ENSMUST00000022623 LrpprcQ6PB66 1392 aaKnown RBP17.16■□□□□ 0.34
Trim35-201ENSMUST00000022623 Arhgap35Q91YM2 1499 aa17.16■□□□□ 0.34
Trim35-201ENSMUST00000022623 Neurod1Q60867 357 aa17.14■□□□□ 0.33
Trim35-201ENSMUST00000022623 Aebp2Q9Z248 504 aaKnown RBP17.14■□□□□ 0.33
Trim35-201ENSMUST00000022623 Shroom4Q1W617 1475 aa17.11■□□□□ 0.33
Trim35-201ENSMUST00000022623 Lamc3Q9R0B6 1581 aa17.1■□□□□ 0.33
Trim35-201ENSMUST00000022623 Dhx29Q6PGC1 1365 aaKnown RBP17.08■□□□□ 0.33
Trim35-201ENSMUST00000022623 Fkbp15Q6P9Q6 1216 aaKnown RBP17.08■□□□□ 0.32
Trim35-201ENSMUST00000022623 Chic2Q9D9G3 165 aa17.08■□□□□ 0.32
Trim35-201ENSMUST00000022623 1700123L14RikQ3V2K7 440 aa17.08■□□□□ 0.32
Trim35-201ENSMUST00000022623 Camsap1A2AHC3 1581 aa17.07■□□□□ 0.32
Trim35-201ENSMUST00000022623 Grin2bQ01097 1482 aa17.06■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 65 ms