RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Wdr43Q6ZQL4 677 aaKnown RBP22.28■■□□□ 1.16
Trim28-201ENSMUST00000005705 Exoc6Q8R313 802 aa22.27■■□□□ 1.16
Trim28-201ENSMUST00000005705 UacaQ8CGB3 1411 aa22.26■■□□□ 1.15
Trim28-201ENSMUST00000005705 Pkd2O35245 966 aa22.26■■□□□ 1.15
Trim28-201ENSMUST00000005705 Pelp1Q9DBD5 1123 aaKnown RBP22.26■■□□□ 1.15
Trim28-201ENSMUST00000005705 NexmifQ5DTT1 1515 aa22.26■■□□□ 1.15
Trim28-201ENSMUST00000005705 BC005561E9Q5E2 1589 aa22.25■■□□□ 1.15
Trim28-201ENSMUST00000005705 WrnO09053 1401 aa22.24■■□□□ 1.15
Trim28-201ENSMUST00000005705 Smg6P61406 1418 aaKnown RBP22.24■■□□□ 1.15
Trim28-201ENSMUST00000005705 Disp1Q3TDN0 1521 aa22.24■■□□□ 1.15
Trim28-201ENSMUST00000005705 PxdnQ3UQ28 1475 aa22.23■■□□□ 1.15
Trim28-201ENSMUST00000005705 Abca5Q8K448 1642 aa22.22■■□□□ 1.15
Trim28-201ENSMUST00000005705 Dennd4bQ3U1Y4 1499 aa22.2■■□□□ 1.14
Trim28-201ENSMUST00000005705 Lmtk2Q3TYD6 1471 aa22.18■■□□□ 1.14
Trim28-201ENSMUST00000005705 Prdm10Q3UTQ7 1184 aa22.18■■□□□ 1.14
Trim28-201ENSMUST00000005705 Pak3Q61036 559 aa22.16■■□□□ 1.14
Trim28-201ENSMUST00000005705 Kcnh8P59111 1102 aa22.15■■□□□ 1.14
Trim28-201ENSMUST00000005705 Slc4a2P13808 1237 aaKnown RBP22.14■■□□□ 1.14
Trim28-201ENSMUST00000005705 Soga1E1U8D0 1418 aa22.12■■□□□ 1.13
Trim28-201ENSMUST00000005705 Rad21Q61550 635 aaKnown RBP22.12■■□□□ 1.13
Trim28-201ENSMUST00000005705 Naip5Q9R016 1403 aa22.11■■□□□ 1.13
Trim28-201ENSMUST00000005705 Rtl5Q5DTT4 599 aa22.11■■□□□ 1.13
Trim28-201ENSMUST00000005705 Adamts12Q811B3 1600 aa22.1■■□□□ 1.13
Trim28-201ENSMUST00000005705 Ncoa2Q61026 1462 aa22.1■■□□□ 1.13
Trim28-201ENSMUST00000005705 Ncoa3O09000 1398 aa22.1■■□□□ 1.13
Trim28-201ENSMUST00000005705 Trak1Q6PD31 939 aa22.08■■□□□ 1.13
Trim28-201ENSMUST00000005705 Mug1P28665 1476 aa22.07■■□□□ 1.12
Trim28-201ENSMUST00000005705 Usp47Q8BY87 1376 aa22.07■■□□□ 1.12
Trim28-201ENSMUST00000005705 Setd1bQ8CFT2 1985 aa22.06■■□□□ 1.12
Trim28-201ENSMUST00000005705 Abcc5Q9R1X5 1436 aa22.06■■□□□ 1.12
Trim28-201ENSMUST00000005705 Plekhh2Q8C115 1491 aa22.04■■□□□ 1.12
Trim28-201ENSMUST00000005705 Gcc2Q8CHG3 1679 aa22.04■■□□□ 1.12
Trim28-201ENSMUST00000005705 Mtus2Q3UHD3 1353 aa22.04■■□□□ 1.12
Trim28-201ENSMUST00000005705 Arhgef40Q3UPH7 1517 aa22.03■■□□□ 1.12
Trim28-201ENSMUST00000005705 Abca16E9PWJ7 1678 aa22.02■■□□□ 1.12
Trim28-201ENSMUST00000005705 Washc2Q6PGL7 1334 aa22.02■■□□□ 1.11
Trim28-201ENSMUST00000005705 Rundc1Q0VDN7 615 aa22.01■■□□□ 1.11
Trim28-201ENSMUST00000005705 Ift140E9PY46 1464 aa22.01■■□□□ 1.11
Trim28-201ENSMUST00000005705 Ofd1Q80Z25 1017 aa21.99■■□□□ 1.11
Trim28-201ENSMUST00000005705 Kdm6bQ5NCY0 1641 aa21.97■■□□□ 1.11
Trim28-201ENSMUST00000005705 Dhx9O70133 1380 aaKnown RBP21.96■■□□□ 1.11
Trim28-201ENSMUST00000005705 Cul7Q8VE73 1689 aa21.95■■□□□ 1.1
Trim28-201ENSMUST00000005705 Arhgap31A6X8Z5 1425 aa21.95■■□□□ 1.1
Trim28-201ENSMUST00000005705 Nup160Q9Z0W3 1402 aaKnown RBP21.95■■□□□ 1.1
Trim28-201ENSMUST00000005705 Erich6D3Z6S9 713 aa21.94■■□□□ 1.1
Trim28-201ENSMUST00000005705 Rapgef6Q5NCJ1 1609 aa21.94■■□□□ 1.1
Trim28-201ENSMUST00000005705 Cc2d2bA0A286YDU8 1405 aa21.93■■□□□ 1.1
Trim28-201ENSMUST00000005705 Hdac5Q9Z2V6 1113 aa21.93■■□□□ 1.1
Trim28-201ENSMUST00000005705 Card11Q8CIS0 1159 aa21.92■■□□□ 1.1
Trim28-201ENSMUST00000005705 Liat1Q810M6 228 aa21.91■■□□□ 1.1
Trim28-201ENSMUST00000005705 Shroom2A2ALU4 1481 aa21.9■■□□□ 1.1
Trim28-201ENSMUST00000005705 Rfx7F8VPJ6 1459 aa21.89■■□□□ 1.1
Trim28-201ENSMUST00000005705 Adgrb2Q8CGM1 1561 aa21.88■■□□□ 1.09
Trim28-201ENSMUST00000005705 Camsap2Q8C1B1 1461 aa21.87■■□□□ 1.09
Trim28-201ENSMUST00000005705 Tdrd9Q14BI7 1383 aa21.87■■□□□ 1.09
Trim28-201ENSMUST00000005705 Adcy10Q8C0T9 1614 aa21.87■■□□□ 1.09
Trim28-201ENSMUST00000005705 SphkapQ6NSW3 1687 aa21.86■■□□□ 1.09
Trim28-201ENSMUST00000005705 Abcc2Q8VI47 1543 aa21.85■■□□□ 1.09
Trim28-201ENSMUST00000005705 Fhod3Q76LL6 1578 aa21.85■■□□□ 1.09
Trim28-201ENSMUST00000005705 Arhgef11Q68FM7 1552 aa21.84■■□□□ 1.09
Trim28-201ENSMUST00000005705 Ecm2Q5FW85 670 aa21.83■■□□□ 1.08
Trim28-201ENSMUST00000005705 Gm13695A2AK44 830 aa21.82■■□□□ 1.08
Trim28-201ENSMUST00000005705 Rprd2Q6NXI6 1469 aaKnown RBP21.82■■□□□ 1.08
Trim28-201ENSMUST00000005705 Apbb1Q9QXJ1 710 aa21.82■■□□□ 1.08
Trim28-201ENSMUST00000005705 Ttll5Q8CHB8 1328 aa21.81■■□□□ 1.08
Trim28-201ENSMUST00000005705 Rrp7aQ9D1C9 280 aaKnown RBP21.81■■□□□ 1.08
Trim28-201ENSMUST00000005705 Lrriq1Q0P5X1 1673 aa21.8■■□□□ 1.08
Trim28-201ENSMUST00000005705 Egfem1Q8C088 590 aa21.79■■□□□ 1.08
Trim28-201ENSMUST00000005705 Cdc42bpaQ3UU96 1719 aa21.78■■□□□ 1.08
Trim28-201ENSMUST00000005705 Magi1Q6RHR9 1471 aa21.78■■□□□ 1.08
Trim28-201ENSMUST00000005705 Prex2Q3LAC4 1598 aa21.78■■□□□ 1.08
Trim28-201ENSMUST00000005705 AknaQ80VW7 1404 aa21.77■■□□□ 1.08
Trim28-201ENSMUST00000005705 Kdm3bQ6ZPY7 1562 aa21.77■■□□□ 1.07
Trim28-201ENSMUST00000005705 Il16O54824 1322 aa21.76■■□□□ 1.07
Trim28-201ENSMUST00000005705 Os9Q8K2C7 672 aa21.76■■□□□ 1.07
Trim28-201ENSMUST00000005705 Setbp1Q9Z180 1582 aa21.76■■□□□ 1.07
Trim28-201ENSMUST00000005705 Map4P27546 1125 aaKnown RBP21.76■■□□□ 1.07
Trim28-201ENSMUST00000005705 Kdm2aP59997 1161 aa21.76■■□□□ 1.07
Trim28-201ENSMUST00000005705 Q7TT23 1179 aa21.75■■□□□ 1.07
Trim28-201ENSMUST00000005705 L3mbtl2P59178 703 aa21.75■■□□□ 1.07
Trim28-201ENSMUST00000005705 Ccdc141E9Q8Q6 1531 aa21.75■■□□□ 1.07
Trim28-201ENSMUST00000005705 AlkP97793 1621 aa21.74■■□□□ 1.07
Trim28-201ENSMUST00000005705 Pbrm1Q8BSQ9 1634 aaKnown RBP21.74■■□□□ 1.07
Trim28-201ENSMUST00000005705 Neo1P97798 1493 aa21.72■■□□□ 1.07
Trim28-201ENSMUST00000005705 Dhx57Q6P5D3 1388 aaKnown RBP21.72■■□□□ 1.07
Trim28-201ENSMUST00000005705 Jph4Q80WT0 628 aa21.72■■□□□ 1.07
Trim28-201ENSMUST00000005705 Pprc1Q6NZN1 1644 aa21.72■■□□□ 1.07
Trim28-201ENSMUST00000005705 ArxO35085 564 aa21.72■■□□□ 1.07
Trim28-201ENSMUST00000005705 Kiaa1551Q5DTW7 1521 aa21.72■■□□□ 1.07
Trim28-201ENSMUST00000005705 Ncoa1P70365 1447 aa21.72■■□□□ 1.07
Trim28-201ENSMUST00000005705 Dapk1Q80YE7 1442 aa21.72■■□□□ 1.07
Trim28-201ENSMUST00000005705 PnisrA2AJT4 805 aaKnown RBP21.71■■□□□ 1.07
Trim28-201ENSMUST00000005705 Dbr1Q923B1 550 aa21.71■■□□□ 1.07
Trim28-201ENSMUST00000005705 Nup155Q99P88 1391 aaKnown RBP21.71■■□□□ 1.07
Trim28-201ENSMUST00000005705 Rpgrip1lQ8CG73 1264 aa21.71■■□□□ 1.07
Trim28-201ENSMUST00000005705 Fam163aQ8CAA5 168 aa21.7■■□□□ 1.07
Trim28-201ENSMUST00000005705 Mroh2aD3Z750 1679 aa21.7■■□□□ 1.06
Trim28-201ENSMUST00000005705 B4galnt3Q6L8S8 986 aa21.7■■□□□ 1.06
Trim28-201ENSMUST00000005705 Pik3c2gO70167 1506 aa21.69■■□□□ 1.06
Trim28-201ENSMUST00000005705 Ccdc27Q3V036 639 aa21.68■■□□□ 1.06
Retrieved 100 of 22,080 RNA–protein pairs in 8.7 ms