RNA–Protein interactions for RNA: YPR110C

RPC40, Transcript of RNA polymerase subunit AC40, yeast

Gene RPC40, Length 1,008 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPC40	YPR110C	HEF3	P53978	1044 aa	Known RBP	3.11	□□□□□ -1.91
RPC40	YPR110C	RPA49	Q01080	415 aa	Predicted RBP	3.11	□□□□□ -1.91
RPC40	YPR110C	SHR3	Q02774	210 aa		3.11	□□□□□ -1.91
RPC40	YPR110C	PDS5	Q04264	1277 aa		3.11	□□□□□ -1.91
RPC40	YPR110C	RBS1	Q05672	457 aa	Known RBP	3.11	□□□□□ -1.91
RPC40	YPR110C	SSK1	Q07084	712 aa		3.11	□□□□□ -1.91
RPC40	YPR110C	MLH2	Q07980	695 aa		3.11	□□□□□ -1.91
RPC40	YPR110C	GEP3	Q08622	556 aa		3.11	□□□□□ -1.91
RPC40	YPR110C	BRR1	Q99177	341 aa	Predicted RBP	3.11	□□□□□ -1.91
RPC40	YPR110C	SGV1	P23293	657 aa	Known RBP	3.1	□□□□□ -1.91
RPC40	YPR110C	ADK2	P26364	225 aa		3.1	□□□□□ -1.91
RPC40	YPR110C	ATO2	P32907	282 aa		3.1	□□□□□ -1.91
RPC40	YPR110C	SAS3	P34218	831 aa		3.1	□□□□□ -1.91
RPC40	YPR110C	TCM62	P38228	572 aa	Known RBP	3.1	□□□□□ -1.91
RPC40	YPR110C	ERG7	P38604	731 aa		3.1	□□□□□ -1.91
RPC40	YPR110C	MBB1	P39534	108 aa		3.1	□□□□□ -1.91
RPC40	YPR110C	TIF4631	P39935	952 aa	Known RBP	3.1	□□□□□ -1.91
RPC40	YPR110C	YIR016W	P40572	265 aa		3.1	□□□□□ -1.91
RPC40	YPR110C	DLD2	P46681	530 aa	Known RBP	3.1	□□□□□ -1.91
RPC40	YPR110C	GUF1	P46943	645 aa		3.1	□□□□□ -1.91
RPC40	YPR110C	YML6	P51998	286 aa		3.1	□□□□□ -1.91
RPC40	YPR110C	DUG3	P53871	357 aa		3.1	□□□□□ -1.91
RPC40	YPR110C	BET4	Q00618	327 aa		3.1	□□□□□ -1.91
RPC40	YPR110C	YLR281C	Q05863	155 aa		3.1	□□□□□ -1.91
RPC40	YPR110C	YDL057W	Q07379	328 aa		3.1	□□□□□ -1.91
RPC40	YPR110C	THI20	Q08224	551 aa		3.1	□□□□□ -1.91
RPC40	YPR110C	THP1	Q08231	455 aa		3.1	□□□□□ -1.91
RPC40	YPR110C	XRN1	P22147	1528 aa	Known RBP	3.09	□□□□□ -1.91
RPC40	YPR110C	RAD52	P06778	471 aa	Known RBP	3.09	□□□□□ -1.91
RPC40	YPR110C	COR1	P07256	457 aa		3.09	□□□□□ -1.91
RPC40	YPR110C	MGR1	P25573	417 aa		3.09	□□□□□ -1.91
RPC40	YPR110C	HXT3	P32466	567 aa	Known RBP	3.09	□□□□□ -1.91
RPC40	YPR110C	MSN2	P33748	704 aa		3.09	□□□□□ -1.91
RPC40	YPR110C	EFM2	P38347	419 aa		3.09	□□□□□ -1.91
RPC40	YPR110C	YER130C	P39959	443 aa		3.09	□□□□□ -1.91
RPC40	YPR110C	YMR147W	P40218	223 aa	Known RBP	3.09	□□□□□ -1.91
RPC40	YPR110C	CAF130	P53280	1122 aa	Predicted RBP	3.09	□□□□□ -1.91
RPC40	YPR110C	BUD32	P53323	261 aa		3.09	□□□□□ -1.91
RPC40	YPR110C	YPL014W	Q02606	381 aa		3.09	□□□□□ -1.91
RPC40	YPR110C	YPL068C	Q02749	293 aa		3.09	□□□□□ -1.91
RPC40	YPR110C	DIC1	Q06143	298 aa		3.09	□□□□□ -1.91
RPC40	YPR110C	APL5	Q08951	932 aa	Known RBP	3.09	□□□□□ -1.91
RPC40	YPR110C	BSC1	Q12140	328 aa		3.09	□□□□□ -1.91
RPC40	YPR110C	TYR1	P20049	452 aa		3.08	□□□□□ -1.92
RPC40	YPR110C	YCR007C	P25354	239 aa		3.08	□□□□□ -1.92
RPC40	YPR110C	YCR051W	P25631	222 aa		3.08	□□□□□ -1.92
RPC40	YPR110C	IDH2	P28241	369 aa	Known RBP	3.08	□□□□□ -1.92
RPC40	YPR110C	RAD14	P28519	371 aa		3.08	□□□□□ -1.92
RPC40	YPR110C	MCM4	P30665	933 aa	Known RBP	3.08	□□□□□ -1.92
RPC40	YPR110C	RML2	P32611	393 aa		3.08	□□□□□ -1.92
RPC40	YPR110C	BNA4	P38169	460 aa		3.08	□□□□□ -1.92
RPC40	YPR110C	YTA12	P40341	825 aa		3.08	□□□□□ -1.92
RPC40	YPR110C	CSM2	P40465	213 aa		3.08	□□□□□ -1.92
RPC40	YPR110C	ZPR1	P53303	486 aa	Known RBP	3.08	□□□□□ -1.92
RPC40	YPR110C	SAM50	P53969	484 aa		3.08	□□□□□ -1.92
RPC40	YPR110C	SMA1	Q02651	245 aa		3.08	□□□□□ -1.92
RPC40	YPR110C	MSS11	Q03825	758 aa		3.08	□□□□□ -1.92
RPC40	YPR110C	BNA5	Q05979	453 aa		3.08	□□□□□ -1.92
RPC40	YPR110C	YLR345W	Q06137	509 aa		3.08	□□□□□ -1.92
RPC40	YPR110C	YLR352W	Q06479	807 aa		3.08	□□□□□ -1.92
RPC40	YPR110C	SRL1	Q08673	210 aa		3.08	□□□□□ -1.92
RPC40	YPR110C	DSE3	Q08729	430 aa		3.08	□□□□□ -1.92
RPC40	YPR110C	RGT2	Q12300	763 aa		3.08	□□□□□ -1.92
RPC40	YPR110C	ISN1	Q99312	450 aa		3.08	□□□□□ -1.92
RPC40	YPR110C	THO2	P53552	1597 aa	Known RBP	3.08	□□□□□ -1.92
RPC40	YPR110C	RHO2	P06781	192 aa		3.07	□□□□□ -1.92
RPC40	YPR110C	HNM1	P19807	563 aa		3.07	□□□□□ -1.92
RPC40	YPR110C	REC107	P21651	314 aa		3.07	□□□□□ -1.92
RPC40	YPR110C	YCR043C	P25361	127 aa		3.07	□□□□□ -1.92
RPC40	YPR110C	SPB1	P25582	841 aa	Predicted RBP	3.07	□□□□□ -1.92
RPC40	YPR110C	URA7	P28274	579 aa	Known RBP	3.07	□□□□□ -1.92
RPC40	YPR110C	ACH1	P32316	526 aa		3.07	□□□□□ -1.92
RPC40	YPR110C	RPN2	P32565	945 aa	Known RBP	3.07	□□□□□ -1.92
RPC40	YPR110C	VMA8	P32610	256 aa	Known RBP	3.07	□□□□□ -1.92
RPC40	YPR110C	UTR4	P32626	227 aa		3.07	□□□□□ -1.92
RPC40	YPR110C	HCS1	P34243	683 aa		3.07	□□□□□ -1.92
RPC40	YPR110C	MIC60	P36112	540 aa		3.07	□□□□□ -1.92
RPC40	YPR110C	PIM1	P36775	1133 aa		3.07	□□□□□ -1.92
RPC40	YPR110C	ARC40	P38328	384 aa	Known RBP	3.07	□□□□□ -1.92
RPC40	YPR110C	YIR014W	P40570	242 aa		3.07	□□□□□ -1.92
RPC40	YPR110C	URB2	P47108	1174 aa		3.07	□□□□□ -1.92
RPC40	YPR110C	YGL108C	P53139	140 aa		3.07	□□□□□ -1.92
RPC40	YPR110C	ARX1	Q03862	593 aa	Known RBP	3.07	□□□□□ -1.92
RPC40	YPR110C	SOV1	Q04748	898 aa		3.07	□□□□□ -1.92
RPC40	YPR110C	GLO2	Q05584	274 aa		3.07	□□□□□ -1.92
RPC40	YPR110C	AFT2	Q08957	416 aa		3.07	□□□□□ -1.92
RPC40	YPR110C	PDH1	Q12428	516 aa	Known RBP	3.07	□□□□□ -1.92
RPC40	YPR110C	RRD2	Q12461	358 aa		3.07	□□□□□ -1.92
RPC40	YPR110C	REV3	P14284	1504 aa		3.07	□□□□□ -1.92
RPC40	YPR110C	GPH1	P06738	902 aa	Known RBP	3.06	□□□□□ -1.92
RPC40	YPR110C	SPS4	P09937	338 aa		3.06	□□□□□ -1.92
RPC40	YPR110C	DBF4	P32325	704 aa		3.06	□□□□□ -1.92
RPC40	YPR110C	RAD24	P32641	659 aa		3.06	□□□□□ -1.92
RPC40	YPR110C	GYP6	P32806	458 aa		3.06	□□□□□ -1.92
RPC40	YPR110C	VPS17	P32913	551 aa		3.06	□□□□□ -1.92
RPC40	YPR110C	ECM15	P35195	104 aa		3.06	□□□□□ -1.92
RPC40	YPR110C	STB6	P36085	766 aa		3.06	□□□□□ -1.92
RPC40	YPR110C	TUL1	P36096	758 aa		3.06	□□□□□ -1.92
RPC40	YPR110C	KEL1	P38853	1164 aa	Known RBP	3.06	□□□□□ -1.92
RPC40	YPR110C	YJL068C	P40363	299 aa		3.06	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 67.7 ms