RNA–Protein interactions for RNA: YKR001C

VPS1, Transcript of Dynamin-like GTPase required for vacuolar sorting, yeastyeast

Gene VPS1, Length 2,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS1YKR001C APE1P14904 514 aa5.38□□□□□ -1.55
VPS1YKR001C ESS1P22696 170 aa5.38□□□□□ -1.55
VPS1YKR001C AAT2P23542 418 aaKnown RBP5.38□□□□□ -1.55
VPS1YKR001C CPR4P25334 318 aa5.38□□□□□ -1.55
VPS1YKR001C PEP3P27801 918 aa5.38□□□□□ -1.55
VPS1YKR001C SFP1P32432 683 aa5.38□□□□□ -1.55
VPS1YKR001C GCD11P32481 527 aaKnown RBP5.38□□□□□ -1.55
VPS1YKR001C TCA17P32613 152 aa5.38□□□□□ -1.55
VPS1YKR001C BEM3P32873 1128 aa5.38□□□□□ -1.55
VPS1YKR001C RRP3P38712 501 aaKnown RBP5.38□□□□□ -1.55
VPS1YKR001C RSP5P39940 809 aaKnown RBP5.38□□□□□ -1.55
VPS1YKR001C VHR1P40522 640 aa5.38□□□□□ -1.55
VPS1YKR001C PAC11P40960 533 aa5.38□□□□□ -1.55
VPS1YKR001C RRN7P40992 514 aa5.38□□□□□ -1.55
VPS1YKR001C GAB1P41733 394 aa5.38□□□□□ -1.55
VPS1YKR001C AMA1P50082 593 aa5.38□□□□□ -1.55
VPS1YKR001C NSA1P53136 463 aaPredicted RBP5.38□□□□□ -1.55
VPS1YKR001C NPY1P53164 384 aa5.38□□□□□ -1.55
VPS1YKR001C PRM1P53835 661 aa5.38□□□□□ -1.55
VPS1YKR001C TIM10P87108 93 aa5.38□□□□□ -1.55
VPS1YKR001C YDC1Q02896 317 aa5.38□□□□□ -1.55
VPS1YKR001C NGL2Q03264 515 aaKnown RBP5.38□□□□□ -1.55
VPS1YKR001C SEG1Q04279 960 aa5.38□□□□□ -1.55
VPS1YKR001C GTO3Q04806 366 aa5.38□□□□□ -1.55
VPS1YKR001C BCH1Q05029 724 aa5.38□□□□□ -1.55
VPS1YKR001C SKI7Q08491 747 aaPredicted RBP5.38□□□□□ -1.55
VPS1YKR001C AIM41Q12032 185 aa5.38□□□□□ -1.55
VPS1YKR001C RPN5Q12250 445 aaKnown RBP5.38□□□□□ -1.55
VPS1YKR001C PGA3Q12746 312 aaKnown RBP5.38□□□□□ -1.55
VPS1YKR001C TEL1P38110 2787 aa5.38□□□□□ -1.55
VPS1YKR001C FMP27Q06179 2628 aa5.37□□□□□ -1.55
VPS1YKR001C ENO1P00924 437 aaKnown RBP5.37□□□□□ -1.55
VPS1YKR001C SRD1P09007 221 aa5.37□□□□□ -1.55
VPS1YKR001C RPL40AP0CH08 128 aaKnown RBP5.37□□□□□ -1.55
VPS1YKR001C RPL40BP0CH09 128 aaKnown RBP5.37□□□□□ -1.55
VPS1YKR001C ERR1P0CX10 437 aa5.37□□□□□ -1.55
VPS1YKR001C ERR2P0CX11 437 aa5.37□□□□□ -1.55
VPS1YKR001C RGR1P19263 1082 aa5.37□□□□□ -1.55
VPS1YKR001C CNB1P25296 175 aa5.37□□□□□ -1.55
VPS1YKR001C COT1P32798 439 aa5.37□□□□□ -1.55
VPS1YKR001C YKL097CP34245 136 aa5.37□□□□□ -1.55
VPS1YKR001C HEK2P38199 381 aaKnown RBP RIP-Chip data5.37□□□□□ -1.55not detected
VPS1YKR001C LTP1P40347 161 aa5.37□□□□□ -1.55
VPS1YKR001C YIR016WP40572 265 aa5.37□□□□□ -1.55
VPS1YKR001C LCB2P40970 561 aa5.37□□□□□ -1.55
VPS1YKR001C HXT14P42833 540 aa5.37□□□□□ -1.55
VPS1YKR001C JJJ3P47138 172 aa5.37□□□□□ -1.55
VPS1YKR001C YJR154WP47181 346 aa5.37□□□□□ -1.55
VPS1YKR001C HLJ1P48353 224 aa5.37□□□□□ -1.55
VPS1YKR001C RFX1P48743 811 aa5.37□□□□□ -1.55
VPS1YKR001C SCY1P53009 804 aa5.37□□□□□ -1.55
VPS1YKR001C GPG1P53130 126 aa5.37□□□□□ -1.55
VPS1YKR001C ERP6P53198 216 aa5.37□□□□□ -1.55
VPS1YKR001C RNY1Q02933 434 aaKnown RBP5.37□□□□□ -1.55
VPS1YKR001C VHS1Q03785 461 aa5.37□□□□□ -1.55
VPS1YKR001C PLM2Q04383 521 aa5.37□□□□□ -1.55
VPS1YKR001C GPN3Q06543 272 aa5.37□□□□□ -1.55
VPS1YKR001C SRO7Q12038 1033 aa5.37□□□□□ -1.55
VPS1YKR001C RPN6Q12377 434 aa5.37□□□□□ -1.55
VPS1YKR001C ENO2P00925 437 aaKnown RBP5.36□□□□□ -1.55
VPS1YKR001C SPT3P06844 337 aa5.36□□□□□ -1.55
VPS1YKR001C MET2P08465 486 aa5.36□□□□□ -1.55
VPS1YKR001C SSA3P09435 649 aaKnown RBP5.36□□□□□ -1.55
VPS1YKR001C AAC3P18238 307 aa5.36□□□□□ -1.55
VPS1YKR001C ATG22P25568 528 aa5.36□□□□□ -1.55
VPS1YKR001C RAM2P29703 316 aa5.36□□□□□ -1.55
VPS1YKR001C NIC96P34077 839 aa5.36□□□□□ -1.55
VPS1YKR001C ANR2P36090 516 aaPredicted RBP5.36□□□□□ -1.55
VPS1YKR001C ECM2P38241 364 aaKnown RBP5.36□□□□□ -1.55
VPS1YKR001C TSC10P38342 320 aa5.36□□□□□ -1.55
VPS1YKR001C UBA4P38820 440 aa5.36□□□□□ -1.55
VPS1YKR001C ATF1P40353 525 aa5.36□□□□□ -1.55
VPS1YKR001C PSA1P41940 361 aaKnown RBP5.36□□□□□ -1.55
VPS1YKR001C YJR111CP47148 283 aaKnown RBP5.36□□□□□ -1.55
VPS1YKR001C VOA1P53262 265 aa5.36□□□□□ -1.55
VPS1YKR001C EOS1P53938 366 aa5.36□□□□□ -1.55
VPS1YKR001C SSY1Q03770 852 aa5.36□□□□□ -1.55
VPS1YKR001C YDR248CQ03786 193 aa5.36□□□□□ -1.55
VPS1YKR001C YMR155WQ03795 547 aa5.36□□□□□ -1.55
VPS1YKR001C LUC7Q07508 261 aaPredicted RBP5.36□□□□□ -1.55
VPS1YKR001C BAG7Q12128 409 aa5.36□□□□□ -1.55
VPS1YKR001C DCN1Q12395 269 aa5.36□□□□□ -1.55
VPS1YKR001C YDL206WQ12424 762 aa5.36□□□□□ -1.55
VPS1YKR001C SKS1Q12505 502 aa5.36□□□□□ -1.55
VPS1YKR001C APM4Q99186 491 aa5.36□□□□□ -1.55
VPS1YKR001C DED1P06634 604 aaKnown RBP5.36□□□□□ -1.55
VPS1YKR001C GPA1P08539 472 aa5.36□□□□□ -1.55
VPS1YKR001C HMG2P12684 1045 aa5.36□□□□□ -1.55
VPS1YKR001C POL30P15873 258 aaKnown RBP5.36□□□□□ -1.55
VPS1YKR001C TEC1P18412 486 aa5.36□□□□□ -1.55
VPS1YKR001C RNA15P25299 296 aaPredicted RBP5.36□□□□□ -1.55
VPS1YKR001C GEX1P25596 615 aa5.36□□□□□ -1.55
VPS1YKR001C CIN8P27895 1000 aa5.36□□□□□ -1.55
VPS1YKR001C URA7P28274 579 aaKnown RBP5.36□□□□□ -1.55
VPS1YKR001C TFC1P32367 649 aa5.36□□□□□ -1.55
VPS1YKR001C PGM1P33401 570 aaKnown RBP5.36□□□□□ -1.55
VPS1YKR001C PRS2P38620 318 aaKnown RBP5.36□□□□□ -1.55
VPS1YKR001C EAF5P39995 279 aa5.36□□□□□ -1.55
VPS1YKR001C TGL3P40308 642 aa5.36□□□□□ -1.55
VPS1YKR001C HXT8P40886 569 aa5.36□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms