RNA–Protein interactions for RNA: YHR077C

NMD2, Transcript of Protein involved in the nonsense-mediated mRNA decay (NMD) pathway, yeastyeast

Gene NMD2, Length 3,270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD2YHR077C RAD51P25454 400 aa2.93□□□□□ -1.94
NMD2YHR077C URK1P27515 501 aa2.93□□□□□ -1.94
NMD2YHR077C YGL015CP33199 130 aa2.93□□□□□ -1.94
NMD2YHR077C PCF11P39081 626 aaPredicted RBP2.93□□□□□ -1.94
NMD2YHR077C YEL020CP39994 560 aa2.93□□□□□ -1.94
NMD2YHR077C YRB2P40517 327 aa2.93□□□□□ -1.94
NMD2YHR077C GAB1P41733 394 aa2.93□□□□□ -1.94
NMD2YHR077C BFA1P47113 574 aa2.93□□□□□ -1.94
NMD2YHR077C EMC4P53073 190 aa2.93□□□□□ -1.94
NMD2YHR077C YGR054WP53235 642 aaKnown RBP2.93□□□□□ -1.94
NMD2YHR077C CLU1Q03690 1277 aaKnown RBP2.93□□□□□ -1.94
NMD2YHR077C BSC2Q05611 235 aa2.93□□□□□ -1.94
NMD2YHR077C YHC1Q05900 231 aaKnown RBP2.93□□□□□ -1.94
NMD2YHR077C SWI5P08153 709 aa2.93□□□□□ -1.94
NMD2YHR077C MSS116P15424 664 aaKnown RBP2.93□□□□□ -1.94
NMD2YHR077C ARF2P19146 181 aaKnown RBP2.93□□□□□ -1.94
NMD2YHR077C RVS161P25343 265 aaKnown RBP2.93□□□□□ -1.94
NMD2YHR077C ATP7P30902 174 aa2.93□□□□□ -1.94
NMD2YHR077C SAC1P32368 623 aaKnown RBP2.93□□□□□ -1.94
NMD2YHR077C ATO2P32907 282 aa2.93□□□□□ -1.94
NMD2YHR077C EFM1P38732 585 aa2.93□□□□□ -1.94
NMD2YHR077C SOP4P39543 234 aaPredicted RBP2.93□□□□□ -1.94
NMD2YHR077C EMP65P40085 556 aa2.93□□□□□ -1.94
NMD2YHR077C IME4P41833 600 aa2.93□□□□□ -1.94
NMD2YHR077C GCN20P43535 752 aaKnown RBP2.93□□□□□ -1.94
NMD2YHR077C PSP1P50896 841 aaKnown RBP2.93□□□□□ -1.94
NMD2YHR077C COP1P53622 1201 aaKnown RBP2.93□□□□□ -1.94
NMD2YHR077C ORC3P54790 616 aa2.93□□□□□ -1.94
NMD2YHR077C GIP3Q03016 1276 aa2.93□□□□□ -1.94
NMD2YHR077C PML39Q03760 334 aa2.93□□□□□ -1.94
NMD2YHR077C RPN9Q04062 393 aaKnown RBP2.93□□□□□ -1.94
NMD2YHR077C GPI17Q04080 534 aa2.93□□□□□ -1.94
NMD2YHR077C SSL1Q04673 461 aaPredicted RBP2.93□□□□□ -1.94
NMD2YHR077C EMG1Q06287 252 aaKnown RBP2.93□□□□□ -1.94
NMD2YHR077C LOT6Q07923 191 aa2.93□□□□□ -1.94
NMD2YHR077C SGT1Q08446 395 aa2.93□□□□□ -1.94
NMD2YHR077C UAF30Q08747 228 aa2.93□□□□□ -1.94
NMD2YHR077C YPL245WQ12179 454 aaKnown RBP2.93□□□□□ -1.94
NMD2YHR077C CLN2P20438 545 aa2.92□□□□□ -1.94
NMD2YHR077C CMK2P22517 447 aa2.92□□□□□ -1.94
NMD2YHR077C RFA2P26754 273 aaKnown RBP2.92□□□□□ -1.94
NMD2YHR077C BRF1P29056 596 aa2.92□□□□□ -1.94
NMD2YHR077C ARP2P32381 391 aaKnown RBP2.92□□□□□ -1.94
NMD2YHR077C NGG1P32494 702 aa2.92□□□□□ -1.94
NMD2YHR077C HBS1P32769 611 aaKnown RBP2.92□□□□□ -1.94
NMD2YHR077C MRPL6P32904 214 aa2.92□□□□□ -1.94
NMD2YHR077C UTP11P34247 250 aaPredicted RBP2.92□□□□□ -1.94
NMD2YHR077C DBP8P38719 431 aa2.92□□□□□ -1.94
NMD2YHR077C DHH1P39517 506 aaKnown RBP2.92□□□□□ -1.94
NMD2YHR077C FMP10P40098 244 aa2.92□□□□□ -1.94
NMD2YHR077C MEP1P40260 492 aa2.92□□□□□ -1.94
NMD2YHR077C PMT4P46971 762 aa2.92□□□□□ -1.94
NMD2YHR077C MNT2P53059 558 aa2.92□□□□□ -1.94
NMD2YHR077C EFM5P53200 248 aaKnown RBP2.92□□□□□ -1.94
NMD2YHR077C HST3P53687 447 aa2.92□□□□□ -1.94
NMD2YHR077C EFM6P53970 246 aa2.92□□□□□ -1.94
NMD2YHR077C SVL3Q03088 825 aaKnown RBP2.92□□□□□ -1.94
NMD2YHR077C TMN2Q04562 672 aa2.92□□□□□ -1.94
NMD2YHR077C IOC2Q12072 812 aa2.92□□□□□ -1.94
NMD2YHR077C YLL054CQ12244 843 aa2.92□□□□□ -1.94
NMD2YHR077C GPR1Q12361 961 aa2.92□□□□□ -1.94
NMD2YHR077C DBP10Q12389 995 aaKnown RBP2.92□□□□□ -1.94
NMD2YHR077C PFK27Q12471 397 aaPredicted RBP2.92□□□□□ -1.94
NMD2YHR077C VCX1Q99385 411 aa2.92□□□□□ -1.94
NMD2YHR077C TPK3P05986 398 aa2.92□□□□□ -1.94
NMD2YHR077C STE3P06783 470 aa2.92□□□□□ -1.94
NMD2YHR077C SST2P11972 698 aaKnown RBP2.92□□□□□ -1.94
NMD2YHR077C PDE1P22434 369 aa2.92□□□□□ -1.94
NMD2YHR077C DPB2P24482 689 aaPredicted RBP2.92□□□□□ -1.94
NMD2YHR077C PUP1P25043 261 aa2.92□□□□□ -1.94
NMD2YHR077C GBP2P25555 427 aaKnown RBP RIP-Chip data2.92□□□□□ -1.94not detected
NMD2YHR077C YJU3P28321 313 aa2.92□□□□□ -1.94
NMD2YHR077C LIP5P32875 414 aa2.92□□□□□ -1.94
NMD2YHR077C SDH3P33421 198 aa2.92□□□□□ -1.94
NMD2YHR077C YKR015CP36111 568 aa2.92□□□□□ -1.94
NMD2YHR077C ARA1P38115 344 aa2.92□□□□□ -1.94
NMD2YHR077C YBR071WP38243 211 aa2.92□□□□□ -1.94
NMD2YHR077C DUN1P39009 513 aa2.92□□□□□ -1.94
NMD2YHR077C CAB2P40506 365 aa2.92□□□□□ -1.94
NMD2YHR077C IRR1P40541 1150 aa2.92□□□□□ -1.94
NMD2YHR077C ERG10P41338 398 aaKnown RBP2.92□□□□□ -1.94
NMD2YHR077C MEP2P41948 499 aa2.92□□□□□ -1.94
NMD2YHR077C SIP4P46954 829 aa2.92□□□□□ -1.94
NMD2YHR077C DAM1P53267 343 aa2.92□□□□□ -1.94
NMD2YHR077C NIS1P53939 407 aa2.92□□□□□ -1.94
NMD2YHR077C ROT1Q03691 256 aa2.92□□□□□ -1.94
NMD2YHR077C VHS1Q03785 461 aa2.92□□□□□ -1.94
NMD2YHR077C RSM24Q03976 319 aa2.92□□□□□ -1.94
NMD2YHR077C RRP45Q05636 305 aaKnown RBP2.92□□□□□ -1.94
NMD2YHR077C YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.92□□□□□ -1.94not detected
NMD2YHR077C RSB1Q08417 382 aa2.92□□□□□ -1.94
NMD2YHR077C MCA1Q08601 432 aa2.92□□□□□ -1.94
NMD2YHR077C RAD7P06779 565 aa2.92□□□□□ -1.94
NMD2YHR077C ALG7P07286 448 aa2.92□□□□□ -1.94
NMD2YHR077C RPB4P20433 221 aaPredicted RBP2.92□□□□□ -1.94
NMD2YHR077C PMT1P33775 817 aa2.92□□□□□ -1.94
NMD2YHR077C PTH2P34222 208 aa2.92□□□□□ -1.94
NMD2YHR077C SRL3P36167 246 aa2.92□□□□□ -1.94
NMD2YHR077C PEX18P38855 283 aa2.92□□□□□ -1.94
NMD2YHR077C ATG7P38862 630 aa2.92□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 43 ms