RNA–Protein interactions for RNA: YDR177W

UBC1, Transcript of Ubiquitin-conjugating enzyme, yeast

Gene UBC1, Length 648 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC1	YDR177W	SAC1	P32368	623 aa	Known RBP	4.71	□□□□□ -1.66
UBC1	YDR177W	SUR1	P33300	382 aa		4.71	□□□□□ -1.66
UBC1	YDR177W	ADH5	P38113	351 aa	Known RBP	4.71	□□□□□ -1.66
UBC1	YDR177W	IMD2	P38697	523 aa	Known RBP	4.71	□□□□□ -1.66
UBC1	YDR177W	OSW5	P40219	148 aa		4.71	□□□□□ -1.66
UBC1	YDR177W	RPA34	P47006	233 aa	Predicted RBP	4.71	□□□□□ -1.66
UBC1	YDR177W	BPL1	P48445	690 aa	Predicted RBP	4.71	□□□□□ -1.66
UBC1	YDR177W	ERV25	P54837	211 aa	Known RBP	4.71	□□□□□ -1.66
UBC1	YDR177W	NOP6	Q07623	225 aa	Known RBP	4.71	□□□□□ -1.66
UBC1	YDR177W	YOR389W	Q08912	624 aa		4.71	□□□□□ -1.66
UBC1	YDR177W	VAM3	Q12241	283 aa		4.71	□□□□□ -1.66
UBC1	YDR177W	PHO91	P27514	894 aa		4.7	□□□□□ -1.66
UBC1	YDR177W	YIM1	P28625	365 aa		4.7	□□□□□ -1.66
UBC1	YDR177W	EMP70	P32802	667 aa		4.7	□□□□□ -1.66
UBC1	YDR177W	RIB7	P33312	244 aa		4.7	□□□□□ -1.66
UBC1	YDR177W	DEF1	P35732	738 aa	Known RBP	4.7	□□□□□ -1.66
UBC1	YDR177W	YHR218W	P38899	603 aa		4.7	□□□□□ -1.66
UBC1	YDR177W	YDR089W	P38966	869 aa		4.7	□□□□□ -1.66
UBC1	YDR177W	YER130C	P39959	443 aa		4.7	□□□□□ -1.66
UBC1	YDR177W	NAS2	P40555	220 aa		4.7	□□□□□ -1.66
UBC1	YDR177W	PRM1	P53835	661 aa		4.7	□□□□□ -1.66
UBC1	YDR177W	YPL062W	Q02781	134 aa		4.7	□□□□□ -1.66
UBC1	YDR177W	YMR160W	Q03823	816 aa		4.7	□□□□□ -1.66
UBC1	YDR177W	HRD3	Q05787	833 aa		4.7	□□□□□ -1.66
UBC1	YDR177W	YOL073C	Q08232	322 aa		4.7	□□□□□ -1.66
UBC1	YDR177W	UBX3	Q12229	455 aa		4.7	□□□□□ -1.66
UBC1	YDR177W	SRN2	Q99176	213 aa		4.7	□□□□□ -1.66
UBC1	YDR177W	RPL7A	P05737	244 aa	Known RBP	4.69	□□□□□ -1.66
UBC1	YDR177W	CDC43	P18898	376 aa		4.69	□□□□□ -1.66
UBC1	YDR177W	PRP2	P20095	876 aa	Predicted RBP	4.69	□□□□□ -1.66
UBC1	YDR177W	PMI40	P29952	429 aa	Known RBP	4.69	□□□□□ -1.66
UBC1	YDR177W	SHP1	P34223	423 aa		4.69	□□□□□ -1.66
UBC1	YDR177W	YKL023W	P36103	277 aa	Known RBP	4.69	□□□□□ -1.66
UBC1	YDR177W	CBP4	P37267	147 aa		4.69	□□□□□ -1.66
UBC1	YDR177W	YBL028C	P38202	106 aa		4.69	□□□□□ -1.66
UBC1	YDR177W	OLA1	P38219	394 aa	Known RBP	4.69	□□□□□ -1.66
UBC1	YDR177W	ZTA1	P38230	334 aa	Known RBP	4.69	□□□□□ -1.66
UBC1	YDR177W	VHC1	P38329	1120 aa		4.69	□□□□□ -1.66
UBC1	YDR177W	YHR131C	P38835	850 aa		4.69	□□□□□ -1.66
UBC1	YDR177W	FAD1	P38913	306 aa		4.69	□□□□□ -1.66
UBC1	YDR177W	SPT8	P38915	602 aa		4.69	□□□□□ -1.66
UBC1	YDR177W	VHS2	P40463	436 aa		4.69	□□□□□ -1.66
UBC1	YDR177W	MKT1	P40850	830 aa	Known RBP	4.69	□□□□□ -1.66
UBC1	YDR177W	YFL015C	P43578	164 aa		4.69	□□□□□ -1.66
UBC1	YDR177W	ATG27	P46989	271 aa		4.69	□□□□□ -1.66
UBC1	YDR177W	YGL117W	P53133	265 aa		4.69	□□□□□ -1.66
UBC1	YDR177W	YGL108C	P53139	140 aa		4.69	□□□□□ -1.66
UBC1	YDR177W	RPC11	Q04307	110 aa	Predicted RBP	4.69	□□□□□ -1.66
UBC1	YDR177W	PML1	Q07930	204 aa	Predicted RBP	4.69	□□□□□ -1.66
UBC1	YDR177W	PCL8	Q08966	492 aa		4.69	□□□□□ -1.66
UBC1	YDR177W	MRH1	Q12117	320 aa	Predicted RBP	4.69	□□□□□ -1.66
UBC1	YDR177W	RPL7B	Q12213	244 aa	Known RBP	4.69	□□□□□ -1.66
UBC1	YDR177W	PFK27	Q12471	397 aa	Predicted RBP	4.69	□□□□□ -1.66
UBC1	YDR177W	PUT2	P07275	575 aa		4.68	□□□□□ -1.66
UBC1	YDR177W	HEM1	P09950	548 aa	Predicted RBP	4.68	□□□□□ -1.66
UBC1	YDR177W	PMR1	P13586	950 aa		4.68	□□□□□ -1.66
UBC1	YDR177W	OM45	P16547	393 aa		4.68	□□□□□ -1.66
UBC1	YDR177W	HIR2	P32480	875 aa		4.68	□□□□□ -1.66
UBC1	YDR177W	MIA40	P36046	403 aa		4.68	□□□□□ -1.66
UBC1	YDR177W	YMC2	P38087	329 aa		4.68	□□□□□ -1.66
UBC1	YDR177W	PFF1	P38244	976 aa		4.68	□□□□□ -1.66
UBC1	YDR177W	TDA10	P42938	290 aa		4.68	□□□□□ -1.66
UBC1	YDR177W	TOM22	P49334	152 aa		4.68	□□□□□ -1.66
UBC1	YDR177W	PHO23	P50947	330 aa		4.68	□□□□□ -1.66
UBC1	YDR177W	APM1	Q00776	475 aa	Predicted RBP	4.68	□□□□□ -1.66
UBC1	YDR177W	RSM23	Q01163	450 aa		4.68	□□□□□ -1.66
UBC1	YDR177W	EGD1	Q02642	157 aa	Known RBP	4.68	□□□□□ -1.66
UBC1	YDR177W	YDR541C	Q03049	344 aa		4.68	□□□□□ -1.66
UBC1	YDR177W	TAP42	Q04372	366 aa		4.68	□□□□□ -1.66
UBC1	YDR177W	RBA50	Q04418	439 aa		4.68	□□□□□ -1.66
UBC1	YDR177W	COQ9	Q05779	260 aa		4.68	□□□□□ -1.66
UBC1	YDR177W	YLH47	Q06493	454 aa		4.68	□□□□□ -1.66
UBC1	YDR177W	CYK3	Q07533	885 aa		4.68	□□□□□ -1.66
UBC1	YDR177W	DIS3	Q08162	1001 aa	Known RBP	4.68	□□□□□ -1.66
UBC1	YDR177W	ACF2	Q12168	779 aa		4.68	□□□□□ -1.66
UBC1	YDR177W	Q0010	Q9ZZX9	128 aa		4.68	□□□□□ -1.66
UBC1	YDR177W	GLT1	Q12680	2145 aa	Known RBP	4.67	□□□□□ -1.66
UBC1	YDR177W	CAR1	P00812	333 aa	Known RBP	4.67	□□□□□ -1.66
UBC1	YDR177W	CBP1	P07252	654 aa		4.67	□□□□□ -1.66
UBC1	YDR177W	COR1	P07256	457 aa		4.67	□□□□□ -1.66
UBC1	YDR177W	UBA1	P22515	1024 aa	Known RBP	4.67	□□□□□ -1.66
UBC1	YDR177W	KRE2	P27809	442 aa		4.67	□□□□□ -1.66
UBC1	YDR177W	FAA1	P30624	700 aa	Known RBP	4.67	□□□□□ -1.66
UBC1	YDR177W	SPC110	P32380	944 aa		4.67	□□□□□ -1.66
UBC1	YDR177W	MRPL40	P36534	297 aa		4.67	□□□□□ -1.66
UBC1	YDR177W	MLH1	P38920	769 aa		4.67	□□□□□ -1.66
UBC1	YDR177W	MBB1	P39534	108 aa		4.67	□□□□□ -1.66
UBC1	YDR177W	SER3	P40054	469 aa		4.67	□□□□□ -1.66
UBC1	YDR177W	DUG3	P53871	357 aa		4.67	□□□□□ -1.66
UBC1	YDR177W	VTC3	Q02725	835 aa		4.67	□□□□□ -1.66
UBC1	YDR177W	YLR455W	Q06188	304 aa		4.67	□□□□□ -1.66
UBC1	YDR177W	RTT109	Q07794	436 aa		4.67	□□□□□ -1.66
UBC1	YDR177W	THP1	Q08231	455 aa		4.67	□□□□□ -1.66
UBC1	YDR177W	RTC1	Q08281	1341 aa		4.67	□□□□□ -1.66
UBC1	YDR177W	GCD2	P12754	651 aa	Predicted RBP	4.66	□□□□□ -1.66
UBC1	YDR177W	PUT4	P15380	627 aa		4.66	□□□□□ -1.66
UBC1	YDR177W	DAP2	P18962	818 aa		4.66	□□□□□ -1.66
UBC1	YDR177W	PMA2	P19657	947 aa		4.66	□□□□□ -1.66
UBC1	YDR177W	TKL1	P23254	680 aa	Known RBP	4.66	□□□□□ -1.66
UBC1	YDR177W	RIM1	P32445	135 aa	Known RBP	4.66	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms