RNA–Protein interactions for RNA: YPL166W

ATG29, Transcript of Autophagy-specific protein, yeast

Gene ATG29, Length 642 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG29	YPL166W	DAP1	Q12091	152 aa		4.25	□□□□□ -1.73
ATG29	YPL166W	NMD4	Q12129	218 aa		4.25	□□□□□ -1.73
ATG29	YPL166W	PDH1	Q12428	516 aa	Known RBP	4.25	□□□□□ -1.73
ATG29	YPL166W	YML002W	P0CF17	737 aa		4.24	□□□□□ -1.73
ATG29	YPL166W	PMS1	P14242	873 aa		4.24	□□□□□ -1.73
ATG29	YPL166W	RPS2	P25443	254 aa	Known RBP	4.24	□□□□□ -1.73
ATG29	YPL166W	VPS17	P32913	551 aa		4.24	□□□□□ -1.73
ATG29	YPL166W	NOP4	P37838	685 aa	Known RBP	4.24	□□□□□ -1.73
ATG29	YPL166W	YGR126W	P53274	230 aa		4.24	□□□□□ -1.73
ATG29	YPL166W	SAM50	P53969	484 aa		4.24	□□□□□ -1.73
ATG29	YPL166W	SHR3	Q02774	210 aa		4.24	□□□□□ -1.73
ATG29	YPL166W	MSC1	Q03104	513 aa		4.24	□□□□□ -1.73
ATG29	YPL166W	YEH1	Q07804	573 aa		4.24	□□□□□ -1.73
ATG29	YPL166W	PDA1	P16387	420 aa	Known RBP	4.23	□□□□□ -1.73
ATG29	YPL166W	EST1	P17214	699 aa	Predicted RBP	4.23	□□□□□ -1.73
ATG29	YPL166W	SUI2	P20459	304 aa	Known RBP	4.23	□□□□□ -1.73
ATG29	YPL166W	YNK1	P36010	153 aa	Known RBP	4.23	□□□□□ -1.73
ATG29	YPL166W	YKL023W	P36103	277 aa	Known RBP	4.23	□□□□□ -1.73
ATG29	YPL166W	CCT6	P39079	546 aa		4.23	□□□□□ -1.73
ATG29	YPL166W	CIN4	P39110	191 aa		4.23	□□□□□ -1.73
ATG29	YPL166W	YTA12	P40341	825 aa		4.23	□□□□□ -1.73
ATG29	YPL166W	UPF3	P48412	387 aa	Known RBP	4.23	□□□□□ -1.73
ATG29	YPL166W	DSD1	P53095	428 aa		4.23	□□□□□ -1.73
ATG29	YPL166W	RHO4	Q00246	291 aa		4.23	□□□□□ -1.73
ATG29	YPL166W	RBA50	Q04418	439 aa		4.23	□□□□□ -1.73
ATG29	YPL166W	GLO2	Q05584	274 aa		4.23	□□□□□ -1.73
ATG29	YPL166W	THI20	Q08224	551 aa		4.23	□□□□□ -1.73
ATG29	YPL166W	SGS1	P35187	1447 aa		4.22	□□□□□ -1.73
ATG29	YPL166W	PEP5	P12868	1029 aa		4.22	□□□□□ -1.73
ATG29	YPL166W	NOP1	P15646	327 aa	Known RBP	4.22	□□□□□ -1.73
ATG29	YPL166W	ART10	P18634	518 aa	Known RBP	4.22	□□□□□ -1.73
ATG29	YPL166W	SEC62	P21825	274 aa		4.22	□□□□□ -1.73
ATG29	YPL166W	SGF29	P25554	259 aa		4.22	□□□□□ -1.73
ATG29	YPL166W	SEF1	P34228	1148 aa		4.22	□□□□□ -1.73
ATG29	YPL166W	VID30	P53076	958 aa		4.22	□□□□□ -1.73
ATG29	YPL166W	IPI3	P53877	555 aa		4.22	□□□□□ -1.73
ATG29	YPL166W	YDL057W	Q07379	328 aa		4.22	□□□□□ -1.73
ATG29	YPL166W	RCN2	Q12044	265 aa		4.22	□□□□□ -1.73
ATG29	YPL166W	YPT6	Q99260	215 aa		4.22	□□□□□ -1.73
ATG29	YPL166W	MRP13	P12686	339 aa		4.21	□□□□□ -1.74
ATG29	YPL166W	TIF3	P34167	436 aa	Known RBP	4.21	□□□□□ -1.74
ATG29	YPL166W	ECM15	P35195	104 aa		4.21	□□□□□ -1.74
ATG29	YPL166W	ALG5	P40350	334 aa		4.21	□□□□□ -1.74
ATG29	YPL166W	IKS1	P47042	667 aa		4.21	□□□□□ -1.74
ATG29	YPL166W	BUD32	P53323	261 aa		4.21	□□□□□ -1.74
ATG29	YPL166W	YDL121C	Q07541	149 aa		4.21	□□□□□ -1.74
ATG29	YPL166W	PEP3	P27801	918 aa		4.2	□□□□□ -1.74
ATG29	YPL166W	PRO3	P32263	286 aa	Known RBP	4.2	□□□□□ -1.74
ATG29	YPL166W	ALT2	P52892	507 aa		4.2	□□□□□ -1.74
ATG29	YPL166W	CTI6	Q08923	506 aa		4.2	□□□□□ -1.74
ATG29	YPL166W	YJR112W-A	Q3E743	109 aa		4.2	□□□□□ -1.74
ATG29	YPL166W	YMR230W-A	Q3E7B5	62 aa		4.2	□□□□□ -1.74
ATG29	YPL166W	OLE1	P21147	510 aa	Known RBP	4.19	□□□□□ -1.74
ATG29	YPL166W	SGV1	P23293	657 aa	Known RBP	4.19	□□□□□ -1.74
ATG29	YPL166W	REG2	P38232	338 aa		4.19	□□□□□ -1.74
ATG29	YPL166W	YHR210C	P38893	341 aa		4.19	□□□□□ -1.74
ATG29	YPL166W	MRX6	P48564	524 aa		4.19	□□□□□ -1.74
ATG29	YPL166W	NCE102	Q12207	173 aa	RIP-Chip data	4.19	□□□□□ -1.74	not detected
ATG29	YPL166W	TOP1	P04786	769 aa		4.18	□□□□□ -1.74
ATG29	YPL166W	MRS3	P10566	314 aa		4.18	□□□□□ -1.74
ATG29	YPL166W	APE1	P14904	514 aa		4.18	□□□□□ -1.74
ATG29	YPL166W	CSM2	P40465	213 aa		4.18	□□□□□ -1.74
ATG29	YPL166W	IMD4	P50094	524 aa	Known RBP	4.18	□□□□□ -1.74
ATG29	YPL166W	YGR066C	P53242	292 aa		4.18	□□□□□ -1.74
ATG29	YPL166W	YMR087W	Q04299	284 aa		4.18	□□□□□ -1.74
ATG29	YPL166W	HSH49	Q99181	213 aa	Predicted RBP	4.18	□□□□□ -1.74
ATG29	YPL166W	PEP4	P07267	405 aa	Known RBP	4.17	□□□□□ -1.74
ATG29	YPL166W	CBS1	P14066	229 aa		4.17	□□□□□ -1.74
ATG29	YPL166W	SIP2	P34164	415 aa	Known RBP	4.17	□□□□□ -1.74
ATG29	YPL166W	TCD2	P36101	447 aa	Known RBP	4.17	□□□□□ -1.74
ATG29	YPL166W	OSH3	P38713	996 aa	Known RBP	4.17	□□□□□ -1.74
ATG29	YPL166W	DHH1	P39517	506 aa	Known RBP	4.17	□□□□□ -1.74
ATG29	YPL166W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
ATG29	YPL166W	ALK1	P43633	760 aa	Known RBP	4.17	□□□□□ -1.74
ATG29	YPL166W	YJR154W	P47181	346 aa		4.17	□□□□□ -1.74
ATG29	YPL166W	TOF2	Q02208	771 aa		4.17	□□□□□ -1.74
ATG29	YPL166W	RPM2	Q02773	1202 aa		4.17	□□□□□ -1.74
ATG29	YPL166W	RTT103	Q05543	409 aa		4.17	□□□□□ -1.74
ATG29	YPL166W	HCR1	Q05775	265 aa	Known RBP	4.17	□□□□□ -1.74
ATG29	YPL166W	VPS38	Q05919	439 aa		4.17	□□□□□ -1.74
ATG29	YPL166W	YOR365C	Q08844	703 aa		4.17	□□□□□ -1.74
ATG29	YPL166W	GCN4	P03069	281 aa		4.16	□□□□□ -1.74
ATG29	YPL166W	IMP2'	P32351	346 aa		4.16	□□□□□ -1.74
ATG29	YPL166W	PTR2	P32901	601 aa		4.16	□□□□□ -1.74
ATG29	YPL166W	SHP1	P34223	423 aa		4.16	□□□□□ -1.74
ATG29	YPL166W	MSR1	P38714	643 aa		4.16	□□□□□ -1.74
ATG29	YPL166W	VPS52	P39904	641 aa		4.16	□□□□□ -1.74
ATG29	YPL166W	RBG2	P53295	368 aa	Known RBP	4.16	□□□□□ -1.74
ATG29	YPL166W	VPS75	P53853	264 aa		4.16	□□□□□ -1.74
ATG29	YPL166W	COQ9	Q05779	260 aa		4.16	□□□□□ -1.74
ATG29	YPL166W	THP1	Q08231	455 aa		4.16	□□□□□ -1.74
ATG29	YPL166W	BUD21	Q08492	214 aa	Predicted RBP	4.16	□□□□□ -1.74
ATG29	YPL166W	RLM1	Q12224	676 aa		4.16	□□□□□ -1.74
ATG29	YPL166W	AVL9	Q12500	764 aa		4.16	□□□□□ -1.74
ATG29	YPL166W	CAR1	P00812	333 aa	Known RBP	4.15	□□□□□ -1.75
ATG29	YPL166W	GAL80	P04387	435 aa		4.15	□□□□□ -1.75
ATG29	YPL166W	RAD52	P06778	471 aa	Known RBP	4.15	□□□□□ -1.75
ATG29	YPL166W	MTF1	P14908	341 aa	Known RBP	4.15	□□□□□ -1.75
ATG29	YPL166W	PAP1	P29468	568 aa	Known RBP	4.15	□□□□□ -1.75
ATG29	YPL166W	NDC1	P32500	655 aa		4.15	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 28.3 ms