RNA–Protein interactions for RNA: YPL166W

ATG29, Transcript of Autophagy-specific protein, yeastyeast

Gene ATG29, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG29YPL166W MTC1P47018 478 aaKnown RBP18■□□□□ 0.47
ATG29YPL166W DRS1P32892 752 aaKnown RBP16.85■□□□□ 0.29
ATG29YPL166W FAP1P53971 965 aa16.22■□□□□ 0.19
ATG29YPL166W PRY3P47033 881 aa15.24■□□□□ 0.03
ATG29YPL166W PRI1P10363 409 aa15.17■□□□□ 0.02
ATG29YPL166W AAD16Q02895 342 aa15.1■□□□□ 0.01
ATG29YPL166W ISW2Q08773 1120 aa14.94□□□□□ -0.02
ATG29YPL166W RPG1P38249 964 aaKnown RBP14.79□□□□□ -0.04
ATG29YPL166W DIP2Q12220 943 aaPredicted RBP14.77□□□□□ -0.05
ATG29YPL166W YCK3P39962 524 aa14.36□□□□□ -0.11
ATG29YPL166W TSR3Q12094 313 aaKnown RBP14.36□□□□□ -0.11
ATG29YPL166W HAA1Q12753 694 aaKnown RBP14.29□□□□□ -0.12
ATG29YPL166W RSE1Q04693 1361 aaKnown RBP14.27□□□□□ -0.12
ATG29YPL166W AVT3P36062 692 aa14.23□□□□□ -0.13
ATG29YPL166W BFR2Q06631 534 aaKnown RBP14.02□□□□□ -0.17
ATG29YPL166W RPL17AP05740 184 aaKnown RBP13.83□□□□□ -0.2
ATG29YPL166W RPL17BP46990 184 aaKnown RBP13.83□□□□□ -0.2
ATG29YPL166W MRPL32P25348 183 aa13.8□□□□□ -0.2
ATG29YPL166W REB1P21538 810 aa13.77□□□□□ -0.21
ATG29YPL166W YGL015CP33199 130 aa13.23□□□□□ -0.29
ATG29YPL166W SPT21P35209 758 aa13.2□□□□□ -0.3
ATG29YPL166W CDC27P38042 758 aa13.1□□□□□ -0.31
ATG29YPL166W YKR023WP36119 530 aaKnown RBP13.08□□□□□ -0.32
ATG29YPL166W HOP09932 586 aa12.82□□□□□ -0.36
ATG29YPL166W TFC8Q12308 588 aa12.8□□□□□ -0.36
ATG29YPL166W DCD1P06773 312 aa12.76□□□□□ -0.37
ATG29YPL166W RIM101P33400 625 aa12.76□□□□□ -0.37
ATG29YPL166W UBP10P53874 792 aaPredicted RBP12.71□□□□□ -0.37
ATG29YPL166W MAP2P38174 421 aaKnown RBP12.69□□□□□ -0.38
ATG29YPL166W SCY1P53009 804 aa12.45□□□□□ -0.42
ATG29YPL166W BCH2P36122 765 aa12.4□□□□□ -0.42
ATG29YPL166W OXP1P28273 1286 aa12.35□□□□□ -0.43
ATG29YPL166W TFA1P36100 482 aa12.32□□□□□ -0.44
ATG29YPL166W SLX5P32828 619 aaKnown RBP12.28□□□□□ -0.44
ATG29YPL166W TIF4632P39936 914 aaKnown RBP12.22□□□□□ -0.45
ATG29YPL166W YIL055CP40523 627 aaKnown RBP12.19□□□□□ -0.46
ATG29YPL166W PTP3P40048 928 aa12.16□□□□□ -0.46
ATG29YPL166W TGL3P40308 642 aa12.15□□□□□ -0.46
ATG29YPL166W BUD31P25337 157 aaPredicted RBP12.09□□□□□ -0.47
ATG29YPL166W EPS1P40557 701 aa12.08□□□□□ -0.48
ATG29YPL166W BDF1P35817 686 aa12.03□□□□□ -0.48
ATG29YPL166W YAH1Q12184 172 aaKnown RBP12□□□□□ -0.49
ATG29YPL166W RSM7P47150 247 aa11.99□□□□□ -0.49
ATG29YPL166W BBC1P47068 1157 aa11.88□□□□□ -0.51
ATG29YPL166W AI2P03876 854 aa11.87□□□□□ -0.51
ATG29YPL166W UBP9P39967 754 aa11.78□□□□□ -0.52
ATG29YPL166W YLR271WQ06152 274 aa11.78□□□□□ -0.52
ATG29YPL166W MST1P07236 462 aa11.63□□□□□ -0.55
ATG29YPL166W SSP1P38871 571 aa11.63□□□□□ -0.55
ATG29YPL166W YOR238WQ08634 303 aa11.62□□□□□ -0.55
ATG29YPL166W NSR1P27476 414 aaKnown RBP RIP-Chip data11.59□□□□□ -0.55not detected
ATG29YPL166W PSD2P53037 1138 aaKnown RBP11.59□□□□□ -0.55
ATG29YPL166W ARP8Q12386 881 aaKnown RBP RIP-Chip data11.57□□□□□ -0.56not detected
ATG29YPL166W SIS1P25294 352 aaKnown RBP11.55□□□□□ -0.56
ATG29YPL166W YAP5P40574 245 aa11.54□□□□□ -0.56
ATG29YPL166W YBL029C-AQ3E756 94 aa11.46□□□□□ -0.57
ATG29YPL166W MRM1P25270 412 aa11.45□□□□□ -0.58
ATG29YPL166W CST9Q06032 482 aa11.37□□□□□ -0.59
ATG29YPL166W MGA2P40578 1113 aa11.36□□□□□ -0.59
ATG29YPL166W VNX1P42839 908 aa11.34□□□□□ -0.59
ATG29YPL166W WSC3Q12215 556 aa11.31□□□□□ -0.6
ATG29YPL166W PIB1Q06651 286 aa11.3□□□□□ -0.6
ATG29YPL166W GTT3P39996 337 aa11.29□□□□□ -0.6
ATG29YPL166W SPP1Q03012 353 aa11.26□□□□□ -0.61
ATG29YPL166W RTG3P38165 486 aa11.21□□□□□ -0.61
ATG29YPL166W VPS29P38759 282 aa11.19□□□□□ -0.62
ATG29YPL166W YMR1P47147 688 aaKnown RBP RIP-Chip data11.17□□□□□ -0.62not detected
ATG29YPL166W TIF11P38912 153 aaKnown RBP11.15□□□□□ -0.62
ATG29YPL166W DBP1P24784 617 aaKnown RBP11.12□□□□□ -0.63
ATG29YPL166W RCR1P38212 213 aa11.1□□□□□ -0.63
ATG29YPL166W YFR006WP43590 535 aa11.1□□□□□ -0.63
ATG29YPL166W STS1P38637 319 aa11.07□□□□□ -0.64
ATG29YPL166W ULI1P43604 169 aa11.03□□□□□ -0.64
ATG29YPL166W MSB4Q12317 492 aa11□□□□□ -0.65
ATG29YPL166W VMA1P17255 1071 aaKnown RBP10.99□□□□□ -0.65
ATG29YPL166W SET4P42948 560 aa10.98□□□□□ -0.65
ATG29YPL166W YOL036WQ08206 761 aa10.98□□□□□ -0.65
ATG29YPL166W IOC2Q12072 812 aa10.98□□□□□ -0.65
ATG29YPL166W LDB19Q12502 818 aa10.98□□□□□ -0.65
ATG29YPL166W EAP1P36041 632 aaKnown RBP10.95□□□□□ -0.66
ATG29YPL166W FKH1P40466 484 aa10.95□□□□□ -0.66
ATG29YPL166W AIR2Q12476 344 aaKnown RBP10.95□□□□□ -0.66
ATG29YPL166W SAM3Q08986 587 aa10.91□□□□□ -0.66
ATG29YPL166W YJL171CP46992 396 aa10.88□□□□□ -0.67
ATG29YPL166W TRP5P00931 707 aaKnown RBP10.87□□□□□ -0.67
ATG29YPL166W RTG1P32607 177 aa10.79□□□□□ -0.68
ATG29YPL166W GYP5Q12344 894 aa10.79□□□□□ -0.68
ATG29YPL166W RAM2P29703 316 aa10.77□□□□□ -0.69
ATG29YPL166W YNL035CP53962 389 aaKnown RBP10.76□□□□□ -0.69
ATG29YPL166W BMT6Q12291 365 aa10.74□□□□□ -0.69
ATG29YPL166W NCR1Q12200 1170 aa10.73□□□□□ -0.69
ATG29YPL166W ABP1P15891 592 aaKnown RBP10.72□□□□□ -0.69
ATG29YPL166W MAK11P20484 414 aaKnown RBP10.72□□□□□ -0.69
ATG29YPL166W SEC61P32915 480 aa10.7□□□□□ -0.7
ATG29YPL166W DCW1P36091 449 aa10.7□□□□□ -0.7
ATG29YPL166W MIF2P35201 549 aa10.69□□□□□ -0.7
ATG29YPL166W HTA1P04911 132 aaKnown RBP10.67□□□□□ -0.7
ATG29YPL166W HTA2P04912 132 aa10.67□□□□□ -0.7
ATG29YPL166W JIP4Q03361 876 aa10.65□□□□□ -0.7
ATG29YPL166W DAN4P47179 1161 aa10.64□□□□□ -0.71
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms