RNA–Protein interactions for RNA: YGR239C

PEX21, Transcript of Peroxin required for peroxisomal matrix protein targeting, yeast

Gene PEX21, Length 867 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEX21	YGR239C	YLR345W	Q06137	509 aa		4.26	□□□□□ -1.73
PEX21	YGR239C	YDL007C-A	Q2V2Q0	85 aa		4.26	□□□□□ -1.73
PEX21	YGR239C	RAV1	P47104	1357 aa		4.26	□□□□□ -1.73
PEX21	YGR239C	SRV2	P17555	526 aa	Known RBP	4.25	□□□□□ -1.73
PEX21	YGR239C	BUD5	P25300	642 aa	Predicted RBP	4.25	□□□□□ -1.73
PEX21	YGR239C	ILV6	P25605	309 aa	Known RBP	4.25	□□□□□ -1.73
PEX21	YGR239C	HXT3	P32466	567 aa	Known RBP	4.25	□□□□□ -1.73
PEX21	YGR239C	HCS1	P34243	683 aa		4.25	□□□□□ -1.73
PEX21	YGR239C	FLO5	P38894	1075 aa		4.25	□□□□□ -1.73
PEX21	YGR239C	SNG1	P46950	547 aa		4.25	□□□□□ -1.73
PEX21	YGR239C	YJL055W	P47044	245 aa		4.25	□□□□□ -1.73
PEX21	YGR239C	LYS20	P48570	428 aa	Known RBP	4.25	□□□□□ -1.73
PEX21	YGR239C	SMM1	P53720	384 aa	Known RBP	4.25	□□□□□ -1.73
PEX21	YGR239C	YNL234W	P53857	426 aa		4.25	□□□□□ -1.73
PEX21	YGR239C	ERG13	P54839	491 aa	Known RBP	4.25	□□□□□ -1.73
PEX21	YGR239C	CIK1	Q01649	594 aa		4.25	□□□□□ -1.73
PEX21	YGR239C	MSC1	Q03104	513 aa		4.25	□□□□□ -1.73
PEX21	YGR239C	VTA1	Q06263	330 aa		4.25	□□□□□ -1.73
PEX21	YGR239C	ETT1	Q08421	412 aa	Known RBP	4.25	□□□□□ -1.73
PEX21	YGR239C	GAL4	P04386	881 aa		4.24	□□□□□ -1.73
PEX21	YGR239C	CNA1	P23287	553 aa		4.24	□□□□□ -1.73
PEX21	YGR239C	MNE1	P24720	663 aa		4.24	□□□□□ -1.73
PEX21	YGR239C	LRP1	P38801	184 aa	Known RBP	4.24	□□□□□ -1.73
PEX21	YGR239C	JEM1	P40358	645 aa		4.24	□□□□□ -1.73
PEX21	YGR239C	YPT11	P48559	417 aa		4.24	□□□□□ -1.73
PEX21	YGR239C	IDP3	P53982	420 aa	Known RBP	4.24	□□□□□ -1.73
PEX21	YGR239C	RSC9	Q03124	581 aa		4.24	□□□□□ -1.73
PEX21	YGR239C	RBS1	Q05672	457 aa	Known RBP	4.24	□□□□□ -1.73
PEX21	YGR239C	FMP45	Q07651	309 aa		4.24	□□□□□ -1.73
PEX21	YGR239C	THP1	Q08231	455 aa		4.24	□□□□□ -1.73
PEX21	YGR239C	SPT7	P35177	1332 aa		4.23	□□□□□ -1.73
PEX21	YGR239C	COR1	P07256	457 aa		4.23	□□□□□ -1.73
PEX21	YGR239C	RPL31B	P0C2H9	113 aa	Known RBP	4.23	□□□□□ -1.73
PEX21	YGR239C	APE1	P14904	514 aa		4.23	□□□□□ -1.73
PEX21	YGR239C	YAP1	P19880	650 aa	Known RBP	4.23	□□□□□ -1.73
PEX21	YGR239C	IDH2	P28241	369 aa	Known RBP	4.23	□□□□□ -1.73
PEX21	YGR239C	AFG1	P32317	509 aa		4.23	□□□□□ -1.73
PEX21	YGR239C	SEC66	P33754	206 aa		4.23	□□□□□ -1.73
PEX21	YGR239C	TUL1	P36096	758 aa		4.23	□□□□□ -1.73
PEX21	YGR239C	YKL023W	P36103	277 aa	Known RBP	4.23	□□□□□ -1.73
PEX21	YGR239C	NMD5	P46970	1048 aa		4.23	□□□□□ -1.73
PEX21	YGR239C	AIM22	P47051	409 aa		4.23	□□□□□ -1.73
PEX21	YGR239C	YMR160W	Q03823	816 aa		4.23	□□□□□ -1.73
PEX21	YGR239C	SIL1	Q08199	421 aa		4.23	□□□□□ -1.73
PEX21	YGR239C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.23	□□□□□ -1.73	not detected
PEX21	YGR239C	MDH1	P17505	334 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
PEX21	YGR239C	MBR1	P23493	339 aa		4.22	□□□□□ -1.73
PEX21	YGR239C	SPB1	P25582	841 aa	Predicted RBP	4.22	□□□□□ -1.73
PEX21	YGR239C	BUD14	P27637	709 aa		4.22	□□□□□ -1.73
PEX21	YGR239C	ERV1	P27882	189 aa		4.22	□□□□□ -1.73
PEX21	YGR239C	ECM32	P32644	1121 aa	Known RBP	4.22	□□□□□ -1.73
PEX21	YGR239C	MTR2	P34232	184 aa	Known RBP	4.22	□□□□□ -1.73
PEX21	YGR239C	VPS41	P38959	992 aa		4.22	□□□□□ -1.73
PEX21	YGR239C	KAP120	Q02932	1032 aa		4.22	□□□□□ -1.73
PEX21	YGR239C	ARP10	Q04549	284 aa		4.22	□□□□□ -1.73
PEX21	YGR239C	PAR32	Q12515	295 aa	Known RBP	4.22	□□□□□ -1.73
PEX21	YGR239C	CLC1	P17891	233 aa		4.21	□□□□□ -1.74
PEX21	YGR239C	ELO2	P25358	347 aa		4.21	□□□□□ -1.74
PEX21	YGR239C	URA7	P28274	579 aa	Known RBP	4.21	□□□□□ -1.74
PEX21	YGR239C	MCM4	P30665	933 aa	Known RBP	4.21	□□□□□ -1.74
PEX21	YGR239C	VPH1	P32563	840 aa	Known RBP	4.21	□□□□□ -1.74
PEX21	YGR239C	MDL1	P33310	695 aa		4.21	□□□□□ -1.74
PEX21	YGR239C	BNA4	P38169	460 aa		4.21	□□□□□ -1.74
PEX21	YGR239C	UBA4	P38820	440 aa		4.21	□□□□□ -1.74
PEX21	YGR239C	APE4	P38821	490 aa		4.21	□□□□□ -1.74
PEX21	YGR239C	YIL024C	P40543	189 aa		4.21	□□□□□ -1.74
PEX21	YGR239C	HXT9	P40885	567 aa		4.21	□□□□□ -1.74
PEX21	YGR239C	CAK1	P43568	368 aa	Predicted RBP	4.21	□□□□□ -1.74
PEX21	YGR239C	ALK1	P43633	760 aa	Known RBP	4.21	□□□□□ -1.74
PEX21	YGR239C	NET1	P47035	1189 aa		4.21	□□□□□ -1.74
PEX21	YGR239C	YGR149W	P48236	432 aa		4.21	□□□□□ -1.74
PEX21	YGR239C	PYK2	P52489	506 aa	Known RBP	4.21	□□□□□ -1.74
PEX21	YGR239C	PKP2	P53170	491 aa		4.21	□□□□□ -1.74
PEX21	YGR239C	COP1	P53622	1201 aa	Known RBP	4.21	□□□□□ -1.74
PEX21	YGR239C	YPL014W	Q02606	381 aa		4.21	□□□□□ -1.74
PEX21	YGR239C	SHR3	Q02774	210 aa		4.21	□□□□□ -1.74
PEX21	YGR239C	CTL1	Q03220	320 aa	Known RBP	4.21	□□□□□ -1.74
PEX21	YGR239C	VPS54	Q12071	889 aa		4.21	□□□□□ -1.74
PEX21	YGR239C	YLR112W	Q12130	139 aa		4.21	□□□□□ -1.74
PEX21	YGR239C	CRC1	Q12289	327 aa		4.21	□□□□□ -1.74
PEX21	YGR239C	PDH1	Q12428	516 aa	Known RBP	4.21	□□□□□ -1.74
PEX21	YGR239C	ISN1	Q99312	450 aa		4.21	□□□□□ -1.74
PEX21	YGR239C	CBP1	P07252	654 aa		4.2	□□□□□ -1.74
PEX21	YGR239C	YIM1	P28625	365 aa		4.2	□□□□□ -1.74
PEX21	YGR239C	YME2	P32843	850 aa		4.2	□□□□□ -1.74
PEX21	YGR239C	SHP1	P34223	423 aa		4.2	□□□□□ -1.74
PEX21	YGR239C	NTC20	P38302	140 aa	Predicted RBP	4.2	□□□□□ -1.74
PEX21	YGR239C	MBB1	P39534	108 aa		4.2	□□□□□ -1.74
PEX21	YGR239C	GDI1	P39958	451 aa	Known RBP	4.2	□□□□□ -1.74
PEX21	YGR239C	YGL138C	P53122	345 aa		4.2	□□□□□ -1.74
PEX21	YGR239C	BUD32	P53323	261 aa		4.2	□□□□□ -1.74
PEX21	YGR239C	LGE1	Q02796	332 aa	Known RBP	4.2	□□□□□ -1.74
PEX21	YGR239C	IZH1	Q03419	316 aa		4.2	□□□□□ -1.74
PEX21	YGR239C	RRP45	Q05636	305 aa	Known RBP	4.2	□□□□□ -1.74
PEX21	YGR239C	POS5	Q06892	414 aa		4.2	□□□□□ -1.74
PEX21	YGR239C	SSK1	Q07084	712 aa		4.2	□□□□□ -1.74
PEX21	YGR239C	GPM3	Q12326	303 aa		4.2	□□□□□ -1.74
PEX21	YGR239C	CTF3	Q12748	733 aa		4.2	□□□□□ -1.74
PEX21	YGR239C	PGK1	P00560	416 aa	Known RBP	4.19	□□□□□ -1.74
PEX21	YGR239C	HSP82	P02829	709 aa	Known RBP	4.19	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 20 ms