RNA–Protein interactions for RNA: YDR364C

CDC40, Transcript of Pre-mRNA splicing factor, yeastyeast

Gene CDC40, Length 1,368 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC40YDR364C YOL075CQ08234 1294 aa3.41□□□□□ -1.86
CDC40YDR364C CFT2Q12102 859 aaPredicted RBP3.41□□□□□ -1.86
CDC40YDR364C ADE5,7P07244 802 aaKnown RBP3.4□□□□□ -1.86
CDC40YDR364C VPS33P20795 691 aa3.4□□□□□ -1.86
CDC40YDR364C TKL1P23254 680 aaKnown RBP3.4□□□□□ -1.86
CDC40YDR364C PEX1P24004 1043 aa3.4□□□□□ -1.86
CDC40YDR364C SAT4P25333 603 aaKnown RBP3.4□□□□□ -1.86
CDC40YDR364C POL4P25615 582 aa3.4□□□□□ -1.86
CDC40YDR364C FEN2P25621 512 aaKnown RBP3.4□□□□□ -1.86
CDC40YDR364C GPI10P30777 616 aa3.4□□□□□ -1.86
CDC40YDR364C DSS4P32601 143 aa3.4□□□□□ -1.86
CDC40YDR364C YKL100CP34248 587 aa3.4□□□□□ -1.86
CDC40YDR364C APE3P37302 537 aaKnown RBP3.4□□□□□ -1.86
CDC40YDR364C CTM1P38818 585 aa3.4□□□□□ -1.86
CDC40YDR364C RTT107P38850 1070 aa3.4□□□□□ -1.86
CDC40YDR364C POP2P39008 433 aa3.4□□□□□ -1.86
CDC40YDR364C FLC2P39719 783 aa3.4□□□□□ -1.86
CDC40YDR364C AFG3P39925 761 aa3.4□□□□□ -1.86
CDC40YDR364C JHD1P40034 492 aa3.4□□□□□ -1.86
CDC40YDR364C FIS1P40515 155 aa3.4□□□□□ -1.86
CDC40YDR364C ULP2P40537 1034 aaPredicted RBP3.4□□□□□ -1.86
CDC40YDR364C SSU1P41930 458 aa3.4□□□□□ -1.86
CDC40YDR364C NBP1P52919 319 aaPredicted RBP3.4□□□□□ -1.86
CDC40YDR364C LCL3P53153 274 aa3.4□□□□□ -1.86
CDC40YDR364C ART5P53244 586 aaKnown RBP3.4□□□□□ -1.86
CDC40YDR364C TOF1P53840 1238 aa3.4□□□□□ -1.86
CDC40YDR364C CSL4P53859 292 aaPredicted RBP3.4□□□□□ -1.86
CDC40YDR364C NCS2P53923 493 aaPredicted RBP3.4□□□□□ -1.86
CDC40YDR364C FMP30Q02883 468 aa3.4□□□□□ -1.86
CDC40YDR364C FDC1Q03034 503 aa3.4□□□□□ -1.86
CDC40YDR364C SLD5Q03406 294 aa3.4□□□□□ -1.86
CDC40YDR364C GYL1Q04322 720 aa3.4□□□□□ -1.86
CDC40YDR364C RBA50Q04418 439 aa3.4□□□□□ -1.86
CDC40YDR364C YFT2Q06676 274 aa3.4□□□□□ -1.86
CDC40YDR364C YDL057WQ07379 328 aa3.4□□□□□ -1.86
CDC40YDR364C GEP3Q08622 556 aa3.4□□□□□ -1.86
CDC40YDR364C APL4Q12028 832 aa3.4□□□□□ -1.86
CDC40YDR364C NMD4Q12129 218 aa3.4□□□□□ -1.86
CDC40YDR364C ERP3Q12403 225 aa3.4□□□□□ -1.86
CDC40YDR364C RRP43P25359 394 aaPredicted RBP3.39□□□□□ -1.87
CDC40YDR364C KRR1P25586 316 aaPredicted RBP3.39□□□□□ -1.87
CDC40YDR364C YSC83P32792 385 aa3.39□□□□□ -1.87
CDC40YDR364C MDL1P33310 695 aa3.39□□□□□ -1.87
CDC40YDR364C UBP11P36026 717 aa3.39□□□□□ -1.87
CDC40YDR364C YMC2P38087 329 aa3.39□□□□□ -1.87
CDC40YDR364C LNP1P38878 278 aa3.39□□□□□ -1.87
CDC40YDR364C GDI1P39958 451 aaKnown RBP3.39□□□□□ -1.87
CDC40YDR364C HMF1P40037 129 aaKnown RBP3.39□□□□□ -1.87
CDC40YDR364C PIG2P40187 538 aa3.39□□□□□ -1.87
CDC40YDR364C COS12P53053 380 aa3.39□□□□□ -1.87
CDC40YDR364C VID30P53076 958 aa3.39□□□□□ -1.87
CDC40YDR364C CIK1Q01649 594 aa3.39□□□□□ -1.87
CDC40YDR364C MTG1Q03151 367 aaPredicted RBP3.39□□□□□ -1.87
CDC40YDR364C AIM32Q04689 311 aa3.39□□□□□ -1.87
CDC40YDR364C RGC1Q06108 1083 aaKnown RBP3.39□□□□□ -1.87
CDC40YDR364C SMC5Q08204 1093 aa3.39□□□□□ -1.87
CDC40YDR364C TCO89Q08921 799 aa3.39□□□□□ -1.87
CDC40YDR364C USV1Q12132 391 aa3.39□□□□□ -1.87
CDC40YDR364C TY3A-GQ12173 290 aa3.39□□□□□ -1.87
CDC40YDR364C PAR32Q12515 295 aaKnown RBP3.39□□□□□ -1.87
CDC40YDR364C TY3A-IQ99219 290 aa3.39□□□□□ -1.87
CDC40YDR364C CLB3P24870 427 aa3.38□□□□□ -1.87
CDC40YDR364C BRF1P29056 596 aa3.38□□□□□ -1.87
CDC40YDR364C BCS1P32839 456 aa3.38□□□□□ -1.87
CDC40YDR364C UGP1P32861 499 aaKnown RBP3.38□□□□□ -1.87
CDC40YDR364C NIP100P33420 868 aa3.38□□□□□ -1.87
CDC40YDR364C STB6P36085 766 aa3.38□□□□□ -1.87
CDC40YDR364C TVP38P36164 337 aa3.38□□□□□ -1.87
CDC40YDR364C UBP13P38187 747 aa3.38□□□□□ -1.87
CDC40YDR364C EFM2P38347 419 aa3.38□□□□□ -1.87
CDC40YDR364C LCB2P40970 561 aa3.38□□□□□ -1.87
CDC40YDR364C SMC3P47037 1230 aa3.38□□□□□ -1.87
CDC40YDR364C YJL055WP47044 245 aa3.38□□□□□ -1.87
CDC40YDR364C AAD10P47182 288 aa3.38□□□□□ -1.87
CDC40YDR364C COS5P47187 383 aa3.38□□□□□ -1.87
CDC40YDR364C RPS7BP48164 190 aaKnown RBP3.38□□□□□ -1.87
CDC40YDR364C RFX1P48743 811 aa3.38□□□□□ -1.87
CDC40YDR364C SGF73P53165 657 aa3.38□□□□□ -1.87
CDC40YDR364C YGR054WP53235 642 aaKnown RBP3.38□□□□□ -1.87
CDC40YDR364C ARK1P53974 638 aa3.38□□□□□ -1.87
CDC40YDR364C YMR321CQ04898 105 aa3.38□□□□□ -1.87
CDC40YDR364C VPS38Q05919 439 aa3.38□□□□□ -1.87
CDC40YDR364C CUR1Q06469 252 aa3.38□□□□□ -1.87
CDC40YDR364C YPR078CQ06813 372 aa3.38□□□□□ -1.87
CDC40YDR364C MLH2Q07980 695 aa3.38□□□□□ -1.87
CDC40YDR364C SMF3Q12078 473 aaPredicted RBP3.38□□□□□ -1.87
CDC40YDR364C ATG9Q12142 997 aa3.38□□□□□ -1.87
CDC40YDR364C VCX1Q99385 411 aa3.38□□□□□ -1.87
CDC40YDR364C VPS13Q07878 3144 aa3.38□□□□□ -1.87
CDC40YDR364C STF1P01098 86 aa3.38□□□□□ -1.87
CDC40YDR364C ILS1P09436 1072 aaKnown RBP3.38□□□□□ -1.87
CDC40YDR364C PET123P17558 318 aa3.38□□□□□ -1.87
CDC40YDR364C STE4P18851 423 aa3.38□□□□□ -1.87
CDC40YDR364C PWP1P21304 576 aaKnown RBP3.38□□□□□ -1.87
CDC40YDR364C STE50P25344 346 aa3.38□□□□□ -1.87
CDC40YDR364C AAD3P25612 363 aa3.38□□□□□ -1.87
CDC40YDR364C ADK2P26364 225 aa3.38□□□□□ -1.87
CDC40YDR364C YMC1P32331 307 aa3.38□□□□□ -1.87
CDC40YDR364C NTH1P32356 751 aa3.38□□□□□ -1.87
CDC40YDR364C GCS1P35197 352 aa3.38□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms