RNA–Protein interactions for RNA: YLR199C

PBA1, Transcript of Protein involved in 20S proteasome assembly, yeastyeast

Gene PBA1, Length 831 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PBA1YLR199C RRP36Q12481 300 aaPredicted RBP3.55□□□□□ -1.84
PBA1YLR199C AVL9Q12500 764 aa3.55□□□□□ -1.84
PBA1YLR199C ARD1P07347 238 aaPredicted RBP3.54□□□□□ -1.84
PBA1YLR199C YML002WP0CF17 737 aa3.54□□□□□ -1.84
PBA1YLR199C EST1P17214 699 aaPredicted RBP3.54□□□□□ -1.84
PBA1YLR199C CDC15P27636 974 aa3.54□□□□□ -1.84
PBA1YLR199C BUD14P27637 709 aa3.54□□□□□ -1.84
PBA1YLR199C MSS1P32559 526 aaPredicted RBP3.54□□□□□ -1.84
PBA1YLR199C YEL043WP32618 956 aa3.54□□□□□ -1.84
PBA1YLR199C CMC1P36064 111 aa3.54□□□□□ -1.84
PBA1YLR199C DAD2P36162 133 aa3.54□□□□□ -1.84
PBA1YLR199C AGP2P38090 596 aa3.54□□□□□ -1.84
PBA1YLR199C ADH5P38113 351 aaKnown RBP3.54□□□□□ -1.84
PBA1YLR199C FMO1P38866 432 aa3.54□□□□□ -1.84
PBA1YLR199C NUP60P39705 539 aa3.54□□□□□ -1.84
PBA1YLR199C AFG3P39925 761 aa3.54□□□□□ -1.84
PBA1YLR199C FKH2P41813 862 aa3.54□□□□□ -1.84
PBA1YLR199C BAP3P41815 604 aa3.54□□□□□ -1.84
PBA1YLR199C CAK1P43568 368 aaPredicted RBP3.54□□□□□ -1.84
PBA1YLR199C DLD2P46681 530 aaKnown RBP3.54□□□□□ -1.84
PBA1YLR199C CTR1P49573 406 aa3.54□□□□□ -1.84
PBA1YLR199C STR3P53101 465 aaKnown RBP3.54□□□□□ -1.84
PBA1YLR199C TWF1P53250 332 aa3.54□□□□□ -1.84
PBA1YLR199C YGR111WP53265 400 aa3.54□□□□□ -1.84
PBA1YLR199C INA17Q02888 182 aa3.54□□□□□ -1.84
PBA1YLR199C KAP120Q02932 1032 aa3.54□□□□□ -1.84
PBA1YLR199C USA1Q03714 838 aa3.54□□□□□ -1.84
PBA1YLR199C SOV1Q04748 898 aa3.54□□□□□ -1.84
PBA1YLR199C GPN2Q08726 347 aaPredicted RBP3.54□□□□□ -1.84
PBA1YLR199C CHS5Q12114 671 aaKnown RBP3.54□□□□□ -1.84
PBA1YLR199C PRS5Q12265 496 aaKnown RBP3.54□□□□□ -1.84
PBA1YLR199C CEX1Q12453 761 aa3.54□□□□□ -1.84
PBA1YLR199C YBR255C-AQ3E776 120 aa3.54□□□□□ -1.84
PBA1YLR199C TPK2P06245 380 aa3.53□□□□□ -1.84
PBA1YLR199C RPL1AP0CX43 217 aaKnown RBP3.53□□□□□ -1.84
PBA1YLR199C RPL1BP0CX44 217 aaKnown RBP3.53□□□□□ -1.84
PBA1YLR199C PDE1P22434 369 aa3.53□□□□□ -1.84
PBA1YLR199C PHO84P25297 587 aaKnown RBP3.53□□□□□ -1.84
PBA1YLR199C RFA2P26754 273 aaKnown RBP3.53□□□□□ -1.84
PBA1YLR199C PDB1P32473 366 aaKnown RBP3.53□□□□□ -1.84
PBA1YLR199C LTV1P34078 463 aa3.53□□□□□ -1.84
PBA1YLR199C SEF1P34228 1148 aa3.53□□□□□ -1.84
PBA1YLR199C RRT2P38332 387 aa3.53□□□□□ -1.84
PBA1YLR199C SDH8P38345 138 aa3.53□□□□□ -1.84
PBA1YLR199C YNG2P38806 282 aaKnown RBP3.53□□□□□ -1.84
PBA1YLR199C OSW5P40219 148 aa3.53□□□□□ -1.84
PBA1YLR199C HXT14P42833 540 aa3.53□□□□□ -1.84
PBA1YLR199C SCS3P53012 380 aa3.53□□□□□ -1.84
PBA1YLR199C VID30P53076 958 aa3.53□□□□□ -1.84
PBA1YLR199C YGR079WP53249 370 aa3.53□□□□□ -1.84
PBA1YLR199C BOP3P53958 396 aa3.53□□□□□ -1.84
PBA1YLR199C ERV25P54837 211 aaKnown RBP3.53□□□□□ -1.84
PBA1YLR199C TIM11P81449 96 aaPredicted RBP3.53□□□□□ -1.84
PBA1YLR199C TLG1Q03322 224 aa3.53□□□□□ -1.84
PBA1YLR199C RPC11Q04307 110 aaPredicted RBP3.53□□□□□ -1.84
PBA1YLR199C YMR111CQ04461 462 aaPredicted RBP3.53□□□□□ -1.84
PBA1YLR199C SPH1Q06160 661 aa3.53□□□□□ -1.84
PBA1YLR199C PML1Q07930 204 aaPredicted RBP3.53□□□□□ -1.84
PBA1YLR199C PDR15Q04182 1529 aaKnown RBP3.53□□□□□ -1.84
PBA1YLR199C UFD4P33202 1483 aa3.53□□□□□ -1.84
PBA1YLR199C RPL3P14126 387 aaKnown RBP3.52□□□□□ -1.85
PBA1YLR199C VMA16P23968 213 aa3.52□□□□□ -1.85
PBA1YLR199C ADY2P25613 283 aa3.52□□□□□ -1.85
PBA1YLR199C MVD1P32377 396 aaKnown RBP3.52□□□□□ -1.85
PBA1YLR199C MRE11P32829 692 aa3.52□□□□□ -1.85
PBA1YLR199C PPQ1P32945 549 aa3.52□□□□□ -1.85
PBA1YLR199C SUR1P33300 382 aa3.52□□□□□ -1.85
PBA1YLR199C SEC66P33754 206 aa3.52□□□□□ -1.85
PBA1YLR199C WBP1P33767 430 aaKnown RBP3.52□□□□□ -1.85
PBA1YLR199C TCD2P36101 447 aaKnown RBP3.52□□□□□ -1.85
PBA1YLR199C MRPL7P36519 292 aa3.52□□□□□ -1.85
PBA1YLR199C THI2P38141 450 aa3.52□□□□□ -1.85
PBA1YLR199C YSW1P38280 609 aa3.52□□□□□ -1.85
PBA1YLR199C ARO9P38840 513 aaPredicted RBP3.52□□□□□ -1.85
PBA1YLR199C MTG2P38860 518 aa3.52□□□□□ -1.85
PBA1YLR199C PKP1P40530 394 aa3.52□□□□□ -1.85
PBA1YLR199C IRC8P47046 822 aa3.52□□□□□ -1.85
PBA1YLR199C PRO2P54885 456 aaKnown RBP3.52□□□□□ -1.85
PBA1YLR199C MAK10Q02197 733 aa3.52□□□□□ -1.85
PBA1YLR199C HEL2Q05580 639 aaKnown RBP3.52□□□□□ -1.85
PBA1YLR199C RBS1Q05672 457 aaKnown RBP3.52□□□□□ -1.85
PBA1YLR199C DBP9Q06218 594 aaKnown RBP3.52□□□□□ -1.85
PBA1YLR199C VTA1Q06263 330 aa3.52□□□□□ -1.85
PBA1YLR199C CRN1Q06440 651 aa3.52□□□□□ -1.85
PBA1YLR199C IZH3Q07959 543 aa3.52□□□□□ -1.85
PBA1YLR199C CDC45Q08032 650 aa3.52□□□□□ -1.85
PBA1YLR199C DCI1Q08558 271 aa3.52□□□□□ -1.85
PBA1YLR199C MRN1Q08925 612 aaKnown RBP RIP-Chip data3.52□□□□□ -1.85not detected
PBA1YLR199C FMP40Q08968 688 aaPredicted RBP3.52□□□□□ -1.85
PBA1YLR199C RLM1Q12224 676 aa3.52□□□□□ -1.85
PBA1YLR199C MDY2Q12285 212 aa3.52□□□□□ -1.85
PBA1YLR199C YER175W-AQ8TGU4 54 aa3.52□□□□□ -1.85
PBA1YLR199C XRN1P22147 1528 aaKnown RBP3.52□□□□□ -1.85
PBA1YLR199C CHD1P32657 1468 aa3.52□□□□□ -1.85
PBA1YLR199C PDA1P16387 420 aaKnown RBP3.51□□□□□ -1.85
PBA1YLR199C CLC1P17891 233 aa3.51□□□□□ -1.85
PBA1YLR199C DAP2P18962 818 aa3.51□□□□□ -1.85
PBA1YLR199C KIN3P22209 435 aa3.51□□□□□ -1.85
PBA1YLR199C SNT1P25357 1226 aa3.51□□□□□ -1.85
PBA1YLR199C NTH1P32356 751 aa3.51□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms