RNA–Protein interactions for RNA: YJL178C

ATG27, Transcript of Type I membrane protein involved in autophagy and the Cvt pathway, yeastyeast

Gene ATG27, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG27YJL178C DCP2P53550 970 aaKnown RBP3.56□□□□□ -1.84
ATG27YJL178C EAF7P53911 425 aaKnown RBP3.56□□□□□ -1.84
ATG27YJL178C ECM22Q05958 814 aaPredicted RBP3.56□□□□□ -1.84
ATG27YJL178C PIG1Q06216 648 aa3.56□□□□□ -1.84
ATG27YJL178C UBX3Q12229 455 aa3.56□□□□□ -1.84
ATG27YJL178C ERG8P24521 451 aa3.55□□□□□ -1.84
ATG27YJL178C YUR1P26725 428 aa3.55□□□□□ -1.84
ATG27YJL178C ATO2P32907 282 aa3.55□□□□□ -1.84
ATG27YJL178C SLC1P33333 303 aa3.55□□□□□ -1.84
ATG27YJL178C TEF4P36008 412 aaKnown RBP3.55□□□□□ -1.84
ATG27YJL178C UME6P39001 836 aa3.55□□□□□ -1.84
ATG27YJL178C SWP82P43554 623 aa3.55□□□□□ -1.84
ATG27YJL178C LYS20P48570 428 aaKnown RBP3.55□□□□□ -1.84
ATG27YJL178C SCS3P53012 380 aa3.55□□□□□ -1.84
ATG27YJL178C LSC1P53598 329 aaKnown RBP3.55□□□□□ -1.84
ATG27YJL178C YNR061CP53747 219 aa3.55□□□□□ -1.84
ATG27YJL178C BOP3P53958 396 aa3.55□□□□□ -1.84
ATG27YJL178C YML131WQ03102 365 aa3.55□□□□□ -1.84
ATG27YJL178C NUP53Q03790 475 aa3.55□□□□□ -1.84
ATG27YJL178C SWF1Q04629 336 aa3.55□□□□□ -1.84
ATG27YJL178C SLM3Q12093 417 aa3.55□□□□□ -1.84
ATG27YJL178C YRF1-3P0CX14 1859 aa3.54□□□□□ -1.84
ATG27YJL178C YRF1-7P0CX15 1859 aa3.54□□□□□ -1.84
ATG27YJL178C YRF1-6P53819 1859 aa3.54□□□□□ -1.84
ATG27YJL178C SIR4P11978 1358 aa3.54□□□□□ -1.84
ATG27YJL178C HSP104P31539 908 aaKnown RBP3.54□□□□□ -1.84
ATG27YJL178C CNS1P33313 385 aa3.54□□□□□ -1.84
ATG27YJL178C GND1P38720 489 aaKnown RBP3.54□□□□□ -1.84
ATG27YJL178C VPS41P38959 992 aa3.54□□□□□ -1.84
ATG27YJL178C IST3P40565 148 aaPredicted RBP3.54□□□□□ -1.84
ATG27YJL178C IML2P47031 731 aa3.54□□□□□ -1.84
ATG27YJL178C YNL050CP53952 270 aa3.54□□□□□ -1.84
ATG27YJL178C FRE3Q08905 711 aa3.54□□□□□ -1.84
ATG27YJL178C VCX1Q99385 411 aa3.54□□□□□ -1.84
ATG27YJL178C YLR302CO13544 120 aa3.53□□□□□ -1.84
ATG27YJL178C CHO1P08456 276 aa3.53□□□□□ -1.84
ATG27YJL178C PET111P08468 800 aa3.53□□□□□ -1.84
ATG27YJL178C GPA1P08539 472 aa3.53□□□□□ -1.84
ATG27YJL178C NTR2P36118 322 aaPredicted RBP3.53□□□□□ -1.84
ATG27YJL178C OPY1P38271 328 aa3.53□□□□□ -1.84
ATG27YJL178C PFK26P40433 827 aaKnown RBP3.53□□□□□ -1.84
ATG27YJL178C VPS25P47142 202 aa3.53□□□□□ -1.84
ATG27YJL178C YGL036WP53185 909 aaPredicted RBP3.53□□□□□ -1.84
ATG27YJL178C FCP1Q03254 732 aa3.53□□□□□ -1.84
ATG27YJL178C CAC2Q04199 468 aa3.53□□□□□ -1.84
ATG27YJL178C SNO4Q04902 237 aa3.53□□□□□ -1.84
ATG27YJL178C PSK2Q08217 1101 aa3.53□□□□□ -1.84
ATG27YJL178C GSH2Q08220 491 aa3.53□□□□□ -1.84
ATG27YJL178C SRL1Q08673 210 aa3.53□□□□□ -1.84
ATG27YJL178C DSE3Q08729 430 aa3.53□□□□□ -1.84
ATG27YJL178C HSP33Q08914 237 aaKnown RBP3.53□□□□□ -1.84
ATG27YJL178C HSP32Q08992 237 aa3.53□□□□□ -1.84
ATG27YJL178C PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.53□□□□□ -1.84not detected
ATG27YJL178C ERG27Q12452 347 aaKnown RBP3.53□□□□□ -1.84
ATG27YJL178C YOR019WQ99248 730 aa3.53□□□□□ -1.84
ATG27YJL178C SRB5P32585 307 aa3.52□□□□□ -1.85
ATG27YJL178C RIC1P40395 1056 aa3.52□□□□□ -1.85
ATG27YJL178C YIL152WP40455 235 aa3.52□□□□□ -1.85
ATG27YJL178C MEP2P41948 499 aa3.52□□□□□ -1.85
ATG27YJL178C STB2P46679 850 aa3.52□□□□□ -1.85
ATG27YJL178C PFA5Q03289 374 aa3.52□□□□□ -1.85
ATG27YJL178C ECM16Q04217 1267 aaKnown RBP3.52□□□□□ -1.85
ATG27YJL178C CSI1Q04368 295 aa3.52□□□□□ -1.85
ATG27YJL178C YLR455WQ06188 304 aa3.52□□□□□ -1.85
ATG27YJL178C MLH2Q07980 695 aa3.52□□□□□ -1.85
ATG27YJL178C SSP2Q08646 371 aa3.52□□□□□ -1.85
ATG27YJL178C BUD7Q08754 746 aa3.52□□□□□ -1.85
ATG27YJL178C YLR049CQ12110 428 aa3.52□□□□□ -1.85
ATG27YJL178C IME2P32581 645 aa3.51□□□□□ -1.85
ATG27YJL178C TFC3P34111 1160 aa3.51□□□□□ -1.85
ATG27YJL178C LHS1P36016 881 aa3.51□□□□□ -1.85
ATG27YJL178C YER010CP40011 234 aa3.51□□□□□ -1.85
ATG27YJL178C PCL6P40038 420 aa3.51□□□□□ -1.85
ATG27YJL178C FMP10P40098 244 aa3.51□□□□□ -1.85
ATG27YJL178C ZDS2P54786 942 aa3.51□□□□□ -1.85
ATG27YJL178C RSM28Q03430 361 aa3.51□□□□□ -1.85
ATG27YJL178C SNA4Q07549 140 aa3.51□□□□□ -1.85
ATG27YJL178C GPN2Q08726 347 aaPredicted RBP3.51□□□□□ -1.85
ATG27YJL178C NEW1Q08972 1196 aaKnown RBP3.51□□□□□ -1.85
ATG27YJL178C YLR112WQ12130 139 aa3.51□□□□□ -1.85
ATG27YJL178C MRP20P32387 263 aa3.5□□□□□ -1.85
ATG27YJL178C RAD24P32641 659 aa3.5□□□□□ -1.85
ATG27YJL178C SOF1P33750 489 aaKnown RBP3.5□□□□□ -1.85
ATG27YJL178C RRN3P36070 627 aa3.5□□□□□ -1.85
ATG27YJL178C AAP1P37898 856 aaKnown RBP3.5□□□□□ -1.85
ATG27YJL178C SEC31P38968 1273 aaKnown RBP3.5□□□□□ -1.85
ATG27YJL178C MRX1P40050 688 aa3.5□□□□□ -1.85
ATG27YJL178C RPN11P43588 306 aaKnown RBP3.5□□□□□ -1.85
ATG27YJL178C YFR016CP43597 1233 aaKnown RBP3.5□□□□□ -1.85
ATG27YJL178C VPS4P52917 437 aa3.5□□□□□ -1.85
ATG27YJL178C YLR281CQ05863 155 aa3.5□□□□□ -1.85
ATG27YJL178C ECI1Q05871 280 aa3.5□□□□□ -1.85
ATG27YJL178C POS5Q06892 414 aa3.5□□□□□ -1.85
ATG27YJL178C YOL159CQ08300 171 aa3.5□□□□□ -1.85
ATG27YJL178C ENT1Q12518 454 aa3.5□□□□□ -1.85
ATG27YJL178C YOL087CQ99247 1116 aa3.5□□□□□ -1.85
ATG27YJL178C RSF2P46974 1380 aa3.5□□□□□ -1.85
ATG27YJL178C RPL42AP0CX27 106 aaKnown RBP3.49□□□□□ -1.85
ATG27YJL178C RPL42BP0CX28 106 aaKnown RBP3.49□□□□□ -1.85
ATG27YJL178C ARC40P38328 384 aaKnown RBP3.49□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms