RNA–Protein interactions for RNA: YDR007W

TRP1, Transcript of Phosphoribosylanthranilate isomerase, yeastyeast

Gene TRP1, Length 675 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRP1YDR007W ORC2P32833 620 aa6.09□□□□□ -1.43
TRP1YDR007W PEX5P35056 612 aa6.09□□□□□ -1.43
TRP1YDR007W SRO77P38163 1010 aa6.09□□□□□ -1.43
TRP1YDR007W YNG2P38806 282 aaKnown RBP6.09□□□□□ -1.43
TRP1YDR007W SEC31P38968 1273 aaKnown RBP6.09□□□□□ -1.43
TRP1YDR007W BUR6P40096 142 aa6.09□□□□□ -1.43
TRP1YDR007W BUD22Q04347 519 aaKnown RBP6.09□□□□□ -1.43
TRP1YDR007W SPE4Q12455 300 aa6.09□□□□□ -1.43
TRP1YDR007W YJR112W-AQ3E743 109 aa6.09□□□□□ -1.43
TRP1YDR007W RPA190P10964 1664 aaKnown RBP6.09□□□□□ -1.43
TRP1YDR007W NTE1Q04958 1679 aa6.08□□□□□ -1.44
TRP1YDR007W DMC1P25453 334 aa6.08□□□□□ -1.44
TRP1YDR007W SOF1P33750 489 aaKnown RBP6.08□□□□□ -1.44
TRP1YDR007W AAP1P37898 856 aaKnown RBP6.08□□□□□ -1.44
TRP1YDR007W MUM2P38236 366 aa6.08□□□□□ -1.44
TRP1YDR007W MRX1P40050 688 aa6.08□□□□□ -1.44
TRP1YDR007W AXL1P40851 1208 aa6.08□□□□□ -1.44
TRP1YDR007W OPT1P40897 799 aa6.08□□□□□ -1.44
TRP1YDR007W YFL015CP43578 164 aa6.08□□□□□ -1.44
TRP1YDR007W ASN1P49089 572 aaKnown RBP6.08□□□□□ -1.44
TRP1YDR007W GET3Q12154 354 aaKnown RBP6.08□□□□□ -1.44
TRP1YDR007W GEA2P39993 1459 aaKnown RBP6.08□□□□□ -1.44
TRP1YDR007W DNF1P32660 1571 aa6.07□□□□□ -1.44
TRP1YDR007W SES1P07284 462 aaKnown RBP6.07□□□□□ -1.44
TRP1YDR007W STE12P13574 688 aa6.07□□□□□ -1.44
TRP1YDR007W PDX1P16451 410 aa6.07□□□□□ -1.44
TRP1YDR007W VMA16P23968 213 aa6.07□□□□□ -1.44
TRP1YDR007W RPC53P25441 422 aa6.07□□□□□ -1.44
TRP1YDR007W YIH1P25637 258 aa6.07□□□□□ -1.44
TRP1YDR007W DBF4P32325 704 aa6.07□□□□□ -1.44
TRP1YDR007W LHS1P36016 881 aa6.07□□□□□ -1.44
TRP1YDR007W AFG3P39925 761 aa6.07□□□□□ -1.44
TRP1YDR007W LSM5P40089 93 aaKnown RBP6.07□□□□□ -1.44
TRP1YDR007W VID30P53076 958 aa6.07□□□□□ -1.44
TRP1YDR007W STR3P53101 465 aaKnown RBP6.07□□□□□ -1.44
TRP1YDR007W YGR066CP53242 292 aa6.07□□□□□ -1.44
TRP1YDR007W RSM28Q03430 361 aa6.07□□□□□ -1.44
TRP1YDR007W ARG7Q04728 441 aa6.07□□□□□ -1.44
TRP1YDR007W YLR352WQ06479 807 aa6.07□□□□□ -1.44
TRP1YDR007W PUS9Q12069 462 aa6.07□□□□□ -1.44
TRP1YDR007W RPO21P04050 1733 aaKnown RBP6.07□□□□□ -1.44
TRP1YDR007W ILV2P07342 687 aaKnown RBP6.06□□□□□ -1.44
TRP1YDR007W PSO2P30620 661 aa6.06□□□□□ -1.44
TRP1YDR007W TOA1P32773 286 aa6.06□□□□□ -1.44
TRP1YDR007W SRP72P38688 640 aaKnown RBP6.06□□□□□ -1.44
TRP1YDR007W YEL057CP39983 233 aa6.06□□□□□ -1.44
TRP1YDR007W PHM8P40025 321 aa6.06□□□□□ -1.44
TRP1YDR007W ASG1P40467 964 aa6.06□□□□□ -1.44
TRP1YDR007W SDS3P40505 327 aa6.06□□□□□ -1.44
TRP1YDR007W BUD27P43573 796 aaKnown RBP RIP-Chip data6.06□□□□□ -1.44not detected
TRP1YDR007W MPP10P47083 593 aaKnown RBP6.06□□□□□ -1.44
TRP1YDR007W SML1Q04964 104 aa6.06□□□□□ -1.44
TRP1YDR007W HRD3Q05787 833 aa6.06□□□□□ -1.44
TRP1YDR007W SMC6Q12749 1114 aa6.06□□□□□ -1.44
TRP1YDR007W YPT6Q99260 215 aa6.06□□□□□ -1.44
TRP1YDR007W CAT8P39113 1433 aa6.06□□□□□ -1.44
TRP1YDR007W GDB1Q06625 1536 aa6.05□□□□□ -1.44
TRP1YDR007W VPS15P22219 1454 aa6.05□□□□□ -1.44
TRP1YDR007W YMR084WA2P2R3 262 aa6.05□□□□□ -1.44
TRP1YDR007W HXK2P04807 486 aaKnown RBP6.05□□□□□ -1.44
TRP1YDR007W RPL7AP05737 244 aaKnown RBP6.05□□□□□ -1.44
TRP1YDR007W DFR1P07807 211 aaKnown RBP RIP-Chip data6.05□□□□□ -1.44not detected
TRP1YDR007W PWP1P21304 576 aaKnown RBP6.05□□□□□ -1.44
TRP1YDR007W MUP3P38734 546 aa6.05□□□□□ -1.44
TRP1YDR007W DOT5P40553 215 aa6.05□□□□□ -1.44
TRP1YDR007W MET28P40573 187 aa6.05□□□□□ -1.44
TRP1YDR007W ROK1P45818 564 aaPredicted RBP6.05□□□□□ -1.44
TRP1YDR007W YGR250CP53316 781 aaKnown RBP6.05□□□□□ -1.44
TRP1YDR007W YMR102CQ03177 834 aa6.05□□□□□ -1.44
TRP1YDR007W SXM1Q04175 944 aaKnown RBP6.05□□□□□ -1.44
TRP1YDR007W NDL1Q06568 189 aa6.05□□□□□ -1.44
TRP1YDR007W YOR389WQ08912 624 aa6.05□□□□□ -1.44
TRP1YDR007W RIM20Q12033 661 aa6.05□□□□□ -1.44
TRP1YDR007W RPL7BQ12213 244 aaKnown RBP6.05□□□□□ -1.44
TRP1YDR007W GRX6Q12438 231 aa6.05□□□□□ -1.44
TRP1YDR007W ARO1P08566 1588 aaKnown RBP6.05□□□□□ -1.44
TRP1YDR007W TY3B-GQ99315 1547 aa6.04□□□□□ -1.44
TRP1YDR007W RAD50P12753 1312 aa6.04□□□□□ -1.44
TRP1YDR007W ARD1P07347 238 aaPredicted RBP6.04□□□□□ -1.44
TRP1YDR007W PMA2P19657 947 aa6.04□□□□□ -1.44
TRP1YDR007W PTC6P25646 442 aa6.04□□□□□ -1.44
TRP1YDR007W UBP11P36026 717 aa6.04□□□□□ -1.44
TRP1YDR007W CHS7P38843 316 aa6.04□□□□□ -1.44
TRP1YDR007W VPS41P38959 992 aa6.04□□□□□ -1.44
TRP1YDR007W MET18P40469 1032 aa6.04□□□□□ -1.44
TRP1YDR007W IRC8P47046 822 aa6.04□□□□□ -1.44
TRP1YDR007W RPS7BP48164 190 aaKnown RBP6.04□□□□□ -1.44
TRP1YDR007W IST1P53843 298 aaPredicted RBP6.04□□□□□ -1.44
TRP1YDR007W BUD7Q08754 746 aa6.04□□□□□ -1.44
TRP1YDR007W YPL272CQ08984 517 aa6.04□□□□□ -1.44
TRP1YDR007W TY3B-IQ7LHG5 1498 aaKnown RBP6.03□□□□□ -1.44
TRP1YDR007W PET123P17558 318 aa6.03□□□□□ -1.44
TRP1YDR007W CDC60P26637 1090 aaKnown RBP6.03□□□□□ -1.44
TRP1YDR007W YJU2P28320 278 aaPredicted RBP6.03□□□□□ -1.44
TRP1YDR007W ECM10P39987 644 aa6.03□□□□□ -1.44
TRP1YDR007W TDA10P42938 290 aa6.03□□□□□ -1.44
TRP1YDR007W CTK2P46962 323 aa6.03□□□□□ -1.44
TRP1YDR007W YML6P51998 286 aa6.03□□□□□ -1.44
TRP1YDR007W NRD1P53617 575 aaKnown RBP RIP-Chip data6.03□□□□□ -1.44not detected
TRP1YDR007W YNL058CP53947 316 aa6.03□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms