RNA–Protein interactions for RNA: YKR029C

SET3, Transcript of Defining member of the SET3 histone deacetylase complex, yeastyeast

Gene SET3, Length 2,256 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SET3YKR029C SAN1P22470 610 aa1.35□□□□□ -2.19
SET3YKR029C MBR1P23493 339 aa1.35□□□□□ -2.19
SET3YKR029C ADH7P25377 361 aa1.35□□□□□ -2.19
SET3YKR029C SCO2P38072 301 aa1.35□□□□□ -2.19
SET3YKR029C MAL33P38157 468 aa1.35□□□□□ -2.19
SET3YKR029C UBP13P38187 747 aa1.35□□□□□ -2.19
SET3YKR029C TOM71P38825 639 aaKnown RBP1.35□□□□□ -2.19
SET3YKR029C AFG3P39925 761 aa1.35□□□□□ -2.19
SET3YKR029C XBP1P40489 647 aa1.35□□□□□ -2.19
SET3YKR029C YJL107CP42947 387 aa1.35□□□□□ -2.19
SET3YKR029C SIP4P46954 829 aa1.35□□□□□ -2.19
SET3YKR029C DPB11P47027 764 aaPredicted RBP1.35□□□□□ -2.19
SET3YKR029C DIA3P52290 468 aa1.35□□□□□ -2.19
SET3YKR029C DUO1P53168 247 aaKnown RBP1.35□□□□□ -2.19
SET3YKR029C PIL1P53252 339 aaKnown RBP1.35□□□□□ -2.19
SET3YKR029C YPR003CP53394 754 aa1.35□□□□□ -2.19
SET3YKR029C YSA1Q01976 231 aa1.35□□□□□ -2.19
SET3YKR029C VTC3Q02725 835 aa1.35□□□□□ -2.19
SET3YKR029C YLR455WQ06188 304 aa1.35□□□□□ -2.19
SET3YKR029C RIX7Q07844 837 aaKnown RBP1.35□□□□□ -2.19
SET3YKR029C RCN2Q12044 265 aa1.35□□□□□ -2.19
SET3YKR029C GET3Q12154 354 aaKnown RBP1.35□□□□□ -2.19
SET3YKR029C CRC1Q12289 327 aa1.35□□□□□ -2.19
SET3YKR029C MED1Q12321 566 aa1.35□□□□□ -2.19
SET3YKR029C GCN4P03069 281 aa1.35□□□□□ -2.19
SET3YKR029C KRS1P15180 591 aaKnown RBP1.35□□□□□ -2.19
SET3YKR029C AAC3P18238 307 aa1.35□□□□□ -2.19
SET3YKR029C PEP3P27801 918 aa1.35□□□□□ -2.19
SET3YKR029C SAC1P32368 623 aaKnown RBP1.35□□□□□ -2.19
SET3YKR029C SPC97P38863 823 aa1.35□□□□□ -2.19
SET3YKR029C FLC2P39719 783 aa1.35□□□□□ -2.19
SET3YKR029C ERV46P39727 415 aa1.35□□□□□ -2.19
SET3YKR029C JHD1P40034 492 aa1.35□□□□□ -2.19
SET3YKR029C VRG4P40107 337 aa1.35□□□□□ -2.19
SET3YKR029C CFD1P40558 293 aa1.35□□□□□ -2.19
SET3YKR029C ARF3P40994 183 aaRIP-Chip data1.35□□□□□ -2.19not detected
SET3YKR029C VPS25P47142 202 aa1.35□□□□□ -2.19
SET3YKR029C STR3P53101 465 aaKnown RBP1.35□□□□□ -2.19
SET3YKR029C YGR127WP53275 312 aa1.35□□□□□ -2.19
SET3YKR029C COP1P53622 1201 aaKnown RBP1.35□□□□□ -2.19
SET3YKR029C INN1P53901 409 aa1.35□□□□□ -2.19
SET3YKR029C RSC9Q03124 581 aa1.35□□□□□ -2.19
SET3YKR029C ARP9Q05123 467 aa1.35□□□□□ -2.19
SET3YKR029C ECM22Q05958 814 aaPredicted RBP1.35□□□□□ -2.19
SET3YKR029C VIP1Q06685 1146 aaKnown RBP1.35□□□□□ -2.19
SET3YKR029C GPN2Q08726 347 aaPredicted RBP1.35□□□□□ -2.19
SET3YKR029C LEU9Q12166 604 aaKnown RBP1.35□□□□□ -2.19
SET3YKR029C INP53Q12271 1107 aa1.35□□□□□ -2.19
SET3YKR029C RRI1Q12468 440 aa1.35□□□□□ -2.19
SET3YKR029C RTP1Q12751 981 aa1.35□□□□□ -2.19
SET3YKR029C MF(ALPHA)1P01149 165 aa1.34□□□□□ -2.2
SET3YKR029C PET111P08468 800 aa1.34□□□□□ -2.2
SET3YKR029C RPL19AP0CX82 189 aaKnown RBP1.34□□□□□ -2.2
SET3YKR029C RPL19BP0CX83 189 aaPredicted RBP1.34□□□□□ -2.2
SET3YKR029C RPB8P20436 146 aa1.34□□□□□ -2.2
SET3YKR029C YCK1P23291 538 aa1.34□□□□□ -2.2
SET3YKR029C LCB1P25045 558 aaKnown RBP1.34□□□□□ -2.2
SET3YKR029C YIH1P25637 258 aa1.34□□□□□ -2.2
SET3YKR029C CMK1P27466 446 aaKnown RBP1.34□□□□□ -2.2
SET3YKR029C AUR1P36107 401 aaPredicted RBP1.34□□□□□ -2.2
SET3YKR029C STV1P37296 890 aa1.34□□□□□ -2.2
SET3YKR029C CDC1P40986 491 aa1.34□□□□□ -2.2
SET3YKR029C PTR3P43606 678 aa1.34□□□□□ -2.2
SET3YKR029C RMD8P43620 662 aa1.34□□□□□ -2.2
SET3YKR029C FAR3P46671 204 aa1.34□□□□□ -2.2
SET3YKR029C NET1P47035 1189 aa1.34□□□□□ -2.2
SET3YKR029C RPS7BP48164 190 aaKnown RBP1.34□□□□□ -2.2
SET3YKR029C VID30P53076 958 aa1.34□□□□□ -2.2
SET3YKR029C GIS2P53849 153 aaKnown RBP RIP-Chip data1.34□□□□□ -2.2not detected
SET3YKR029C STP1Q00947 519 aa1.34□□□□□ -2.2
SET3YKR029C RPT6Q01939 405 aaKnown RBP1.34□□□□□ -2.2
SET3YKR029C YMR178WQ03219 274 aaKnown RBP1.34□□□□□ -2.2
SET3YKR029C MRPL1Q04599 285 aa1.34□□□□□ -2.2
SET3YKR029C PIG1Q06216 648 aa1.34□□□□□ -2.2
SET3YKR029C MCP2Q06567 569 aa1.34□□□□□ -2.2
SET3YKR029C POS5Q06892 414 aa1.34□□□□□ -2.2
SET3YKR029C ETT1Q08421 412 aaKnown RBP1.34□□□□□ -2.2
SET3YKR029C ECM5Q03214 1411 aa1.34□□□□□ -2.2
SET3YKR029C GPA1P08539 472 aa1.33□□□□□ -2.2
SET3YKR029C YMR085WP0CF18 432 aa1.33□□□□□ -2.2
SET3YKR029C YAP1P19880 650 aaKnown RBP1.33□□□□□ -2.2
SET3YKR029C PWP1P21304 576 aaKnown RBP1.33□□□□□ -2.2
SET3YKR029C TKL1P23254 680 aaKnown RBP1.33□□□□□ -2.2
SET3YKR029C CNA1P23287 553 aa1.33□□□□□ -2.2
SET3YKR029C OCA4P25366 362 aa1.33□□□□□ -2.2
SET3YKR029C SGF29P25554 259 aa1.33□□□□□ -2.2
SET3YKR029C SNU114P36048 1008 aaKnown RBP1.33□□□□□ -2.2
SET3YKR029C REG2P38232 338 aa1.33□□□□□ -2.2
SET3YKR029C ICS2P38284 255 aa1.33□□□□□ -2.2
SET3YKR029C DBP8P38719 431 aa1.33□□□□□ -2.2
SET3YKR029C UTP9P38882 575 aaKnown RBP1.33□□□□□ -2.2
SET3YKR029C YMR124WP39523 943 aaKnown RBP1.33□□□□□ -2.2
SET3YKR029C NOC2P39744 710 aaKnown RBP1.33□□□□□ -2.2
SET3YKR029C FMP10P40098 244 aa1.33□□□□□ -2.2
SET3YKR029C YIL024CP40543 189 aa1.33□□□□□ -2.2
SET3YKR029C YFR020WP43600 232 aa1.33□□□□□ -2.2
SET3YKR029C BNA3P47039 444 aaKnown RBP1.33□□□□□ -2.2
SET3YKR029C IRC8P47046 822 aa1.33□□□□□ -2.2
SET3YKR029C SRB7P47822 140 aa1.33□□□□□ -2.2
SET3YKR029C YGL036WP53185 909 aaPredicted RBP1.33□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 51.9 ms